RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 ZNF335Q9H4Z2 1342 aaPredicted RBP38.14■■■■□ 3.7
TTC3-223ENST00000492275 LTBP4Q8N2S1 1624 aa38.12■■■■□ 3.69
TTC3-223ENST00000492275 HDGFP51858 240 aaKnown RBP38.12■■■■□ 3.69
TTC3-223ENST00000492275 NUTM2DQ5VT03 806 aaPredicted RBP38.1■■■■□ 3.69
TTC3-223ENST00000492275 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.09■■■■□ 3.69
TTC3-223ENST00000492275 CCDC144AA2RUR9 1427 aa38.08■■■■□ 3.69
TTC3-223ENST00000492275 ZNF326Q5BKZ1 582 aaKnown RBP38.07■■■■□ 3.68
TTC3-223ENST00000492275 PPP1R15AO75807 674 aaPredicted RBP38.05■■■■□ 3.68
TTC3-223ENST00000492275 CERKQ8TCT0 537 aa38.04■■■■□ 3.68
TTC3-223ENST00000492275 PLEKHG1Q9ULL1 1385 aa38.04■■■■□ 3.68
TTC3-223ENST00000492275 SENP3Q9H4L4 574 aaPredicted RBP38.02■■■■□ 3.68
TTC3-223ENST00000492275 ANKRD30BQ9BXX2 1392 aa38.01■■■■□ 3.68
TTC3-223ENST00000492275 NEXMIFQ5QGS0 1516 aa38.01■■■■□ 3.67
TTC3-223ENST00000492275 SLC26A8Q96RN1 970 aa38■■■■□ 3.67
TTC3-223ENST00000492275 BCANQ96GW7 911 aa37.98■■■■□ 3.67
TTC3-223ENST00000492275 STRCP1A6NGW2 1772 aa37.98■■■■□ 3.67
TTC3-223ENST00000492275 SPATA31E1Q6ZUB1 1445 aa37.96■■■■□ 3.67
TTC3-223ENST00000492275 RPGRIP1LQ68CZ1 1315 aa37.92■■■■□ 3.66
TTC3-223ENST00000492275 PPLO60437 1756 aa37.91■■■■□ 3.66
TTC3-223ENST00000492275 ADAMTS13Q76LX8 1427 aa37.9■■■■□ 3.66
TTC3-223ENST00000492275 RGL3Q3MIN7 710 aa37.9■■■■□ 3.66
TTC3-223ENST00000492275 CPS1P31327 1500 aa37.88■■■■□ 3.65
TTC3-223ENST00000492275 TBX22Q9Y458 520 aa37.88■■■■□ 3.65
TTC3-223ENST00000492275 NRXN3Q9Y4C0 1643 aa37.87■■■■□ 3.65
TTC3-223ENST00000492275 SETBP1Q9Y6X0 1596 aa37.85■■■■□ 3.65
TTC3-223ENST00000492275 VGFO15240 615 aaPredicted RBP37.84■■■■□ 3.65
TTC3-223ENST00000492275 IFT172Q9UG01 1749 aa37.83■■■■□ 3.65
TTC3-223ENST00000492275 DIP2AQ14689 1571 aa37.81■■■■□ 3.64
TTC3-223ENST00000492275 KCNA6P17658 529 aa37.81■■■■□ 3.64
TTC3-223ENST00000492275 CHD2O14647 1828 aaKnown RBP37.81■■■■□ 3.64
TTC3-223ENST00000492275 IQSEC2Q5JU85 1478 aa37.8■■■■□ 3.64
TTC3-223ENST00000492275 LRRC7Q96NW7 1537 aa37.77■■■■□ 3.64
TTC3-223ENST00000492275 NWD1Q149M9 1564 aa37.75■■■■□ 3.63
TTC3-223ENST00000492275 ADGRF5Q8IZF2 1346 aa37.74■■■■□ 3.63
TTC3-223ENST00000492275 FBXO41Q8TF61 875 aa37.74■■■■□ 3.63
TTC3-223ENST00000492275 DHX57Q6P158 1386 aaKnown RBP37.73■■■■□ 3.63
TTC3-223ENST00000492275 PIK3R4Q99570 1358 aa37.71■■■■□ 3.63
TTC3-223ENST00000492275 XIRP1Q702N8 1843 aaKnown RBP37.69■■■■□ 3.62
TTC3-223ENST00000492275 METP08581 1390 aa37.68■■■■□ 3.62
TTC3-223ENST00000492275 SETD1AO15047 1707 aaKnown RBP37.68■■■■□ 3.62
TTC3-223ENST00000492275 ILDR1Q86SU0 546 aaPredicted RBP37.68■■■■□ 3.62
TTC3-223ENST00000492275 PCGF6Q9BYE7 350 aa37.68■■■■□ 3.62
TTC3-223ENST00000492275 PTPRUQ92729 1446 aa37.68■■■■□ 3.62
TTC3-223ENST00000492275 ALKQ9UM73 1620 aa37.67■■■■□ 3.62
TTC3-223ENST00000492275 NKTRP30414 1462 aaKnown RBP37.64■■■■□ 3.62
TTC3-223ENST00000492275 PROSER2Q86WR7 435 aaPredicted RBP37.63■■■■□ 3.61
TTC3-223ENST00000492275 AMOTL2Q9Y2J4 779 aa37.63■■■■□ 3.61
TTC3-223ENST00000492275 MYOM2P54296 1465 aa37.6■■■■□ 3.61
TTC3-223ENST00000492275 RBM33Q96EV2 1170 aaKnown RBP37.6■■■■□ 3.61
TTC3-223ENST00000492275 TMEM94Q12767 1356 aa37.59■■■■□ 3.61
TTC3-223ENST00000492275 PIK3C2GO75747 1445 aa37.59■■■■□ 3.61
TTC3-223ENST00000492275 NRXN1Q9ULB1 1477 aa37.58■■■■□ 3.61
TTC3-223ENST00000492275 XRN1Q8IZH2 1706 aaKnown RBP37.57■■■■□ 3.6
TTC3-223ENST00000492275 SIN3AQ96ST3 1273 aa37.57■■■■□ 3.6
TTC3-223ENST00000492275 DCAF11Q8TEB1 546 aa37.56■■■■□ 3.6
TTC3-223ENST00000492275 UBAP1LF5GYI3 381 aa37.54■■■■□ 3.6
TTC3-223ENST00000492275 KDM2AQ9Y2K7 1162 aa37.54■■■■□ 3.6
TTC3-223ENST00000492275 C14orf93Q9H972 538 aaKnown RBP37.49■■■■□ 3.59
TTC3-223ENST00000492275 STAC3Q96MF2 364 aa37.48■■■■□ 3.59
TTC3-223ENST00000492275 TOM1O60784 492 aa37.46■■■■□ 3.59
TTC3-223ENST00000492275 CFAP70Q5T0N1 1121 aa37.46■■■■□ 3.59
TTC3-223ENST00000492275 NEUROD1Q13562 356 aa37.45■■■■□ 3.59
TTC3-223ENST00000492275 ASXL1Q8IXJ9 1541 aa37.45■■■■□ 3.59
TTC3-223ENST00000492275 TMEM132EQ6IEE7 984 aa37.44■■■■□ 3.58
TTC3-223ENST00000492275 NCOA3Q9Y6Q9 1424 aa37.43■■■■□ 3.58
TTC3-223ENST00000492275 LAMC1P11047 1609 aa37.41■■■■□ 3.58
TTC3-223ENST00000492275 PRAG1Q86YV5 1406 aa37.39■■■■□ 3.58
TTC3-223ENST00000492275 L3MBTL2Q969R5 705 aa37.38■■■■□ 3.57
TTC3-223ENST00000492275 ROBO2Q9HCK4 1378 aa37.38■■■■□ 3.57
TTC3-223ENST00000492275 MSH6P52701 1360 aa37.36■■■■□ 3.57
TTC3-223ENST00000492275 PTCH1Q13635 1447 aa37.36■■■■□ 3.57
TTC3-223ENST00000492275 LRPPRCP42704 1394 aaKnown RBP37.35■■■■□ 3.57
TTC3-223ENST00000492275 PIP4K2BP78356 416 aa37.35■■■■□ 3.57
TTC3-223ENST00000492275 STK26Q9P289 416 aa37.34■■■■□ 3.57
TTC3-223ENST00000492275 C14orf37Q86TY3 774 aa37.33■■■■□ 3.57
TTC3-223ENST00000492275 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.33■■■■□ 3.57
TTC3-223ENST00000492275 C19orf44Q9H6X5 657 aa37.32■■■■□ 3.56
TTC3-223ENST00000492275 YTHDC2Q9H6S0 1430 aaKnown RBP37.32■■■■□ 3.56
TTC3-223ENST00000492275 ABCC11Q96J66 1382 aa37.31■■■■□ 3.56
TTC3-223ENST00000492275 TECPR2O15040 1411 aa37.3■■■■□ 3.56
TTC3-223ENST00000492275 KNDC1Q76NI1 1749 aa37.3■■■■□ 3.56
TTC3-223ENST00000492275 ADGRB1O14514 1584 aa37.29■■■■□ 3.56
TTC3-223ENST00000492275 SCAF1Q9H7N4 1312 aaKnown RBP37.28■■■■□ 3.56
TTC3-223ENST00000492275 NALCNQ8IZF0 1738 aa37.25■■■■□ 3.55
TTC3-223ENST00000492275 WAPLQ7Z5K2 1190 aa37.23■■■■□ 3.55
TTC3-223ENST00000492275 KIAA1210Q9ULL0 1709 aa37.22■■■■□ 3.55
TTC3-223ENST00000492275 ADGRL3Q9HAR2 1447 aa37.22■■■■□ 3.55
TTC3-223ENST00000492275 ATF3P18847 181 aa37.2■■■■□ 3.55
TTC3-223ENST00000492275 CADPS2Q86UW7 1296 aa37.2■■■■□ 3.55
TTC3-223ENST00000492275 SIRT1Q96EB6 747 aa37.2■■■■□ 3.55
TTC3-223ENST00000492275 SLAIN2Q9P270 581 aa37.2■■■■□ 3.55
TTC3-223ENST00000492275 PLEKHH1Q9ULM0 1364 aa37.18■■■■□ 3.54
TTC3-223ENST00000492275 DCCP43146 1447 aa37.18■■■■□ 3.54
TTC3-223ENST00000492275 FAM135BQ49AJ0 1406 aa37.16■■■■□ 3.54
TTC3-223ENST00000492275 NBPF1Q3BBV0 1214 aa37.14■■■■□ 3.54
TTC3-223ENST00000492275 TRAK1Q9UPV9 953 aa37.13■■■■□ 3.53
TTC3-223ENST00000492275 DLC1Q96QB1 1528 aa37.13■■■■□ 3.53
TTC3-223ENST00000492275 TONSLQ96HA7 1378 aa37.13■■■■□ 3.53
TTC3-223ENST00000492275 ROBO1Q9Y6N7 1651 aa37.12■■■■□ 3.53
TTC3-223ENST00000492275 HSPA1LP34931 641 aa37.1■■■■□ 3.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms