RNA–Protein interactions for RNA: ENST00000491013.5

FDPS-216, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5

Gene FDPS, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-216ENST00000491013 RIMS2Q9UQ26 1411 aa21.97■■□□□ 1.11
FDPS-216ENST00000491013 CLTCL1P53675 1640 aa21.96■■□□□ 1.11
FDPS-216ENST00000491013 HDGFP51858 240 aaKnown RBP21.96■■□□□ 1.11
FDPS-216ENST00000491013 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
FDPS-216ENST00000491013 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.92■■□□□ 1.1
FDPS-216ENST00000491013 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
FDPS-216ENST00000491013 MPHOSPH9Q99550 1183 aa21.9■■□□□ 1.1
FDPS-216ENST00000491013 PPP1R15AO75807 674 aaPredicted RBP21.89■■□□□ 1.09
FDPS-216ENST00000491013 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
FDPS-216ENST00000491013 SLC26A8Q96RN1 970 aa21.88■■□□□ 1.09
FDPS-216ENST00000491013 LRRC7Q96NW7 1537 aa21.87■■□□□ 1.09
FDPS-216ENST00000491013 CHD2O14647 1828 aaKnown RBP21.87■■□□□ 1.09
FDPS-216ENST00000491013 XIRP1Q702N8 1843 aaKnown RBP21.86■■□□□ 1.09
FDPS-216ENST00000491013 BCANQ96GW7 911 aa21.86■■□□□ 1.09
FDPS-216ENST00000491013 FOXD1Q16676 465 aa21.85■■□□□ 1.09
FDPS-216ENST00000491013 NUTM2DQ5VT03 806 aaPredicted RBP21.85■■□□□ 1.09
FDPS-216ENST00000491013 KCNA6P17658 529 aa21.83■■□□□ 1.09
FDPS-216ENST00000491013 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.09
FDPS-216ENST00000491013 NEXMIFQ5QGS0 1516 aa21.83■■□□□ 1.09
FDPS-216ENST00000491013 DIP2AQ14689 1571 aa21.82■■□□□ 1.08
FDPS-216ENST00000491013 NWD1Q149M9 1564 aa21.82■■□□□ 1.08
FDPS-216ENST00000491013 ADAMTS13Q76LX8 1427 aa21.82■■□□□ 1.08
FDPS-216ENST00000491013 UBAP1LF5GYI3 381 aa21.82■■□□□ 1.08
FDPS-216ENST00000491013 TBX22Q9Y458 520 aa21.82■■□□□ 1.08
FDPS-216ENST00000491013 HRCP23327 699 aa21.81■■□□□ 1.08
FDPS-216ENST00000491013 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
FDPS-216ENST00000491013 NRXN3Q9Y4C0 1643 aa21.8■■□□□ 1.08
FDPS-216ENST00000491013 PPLO60437 1756 aa21.79■■□□□ 1.08
FDPS-216ENST00000491013 SETBP1Q9Y6X0 1596 aa21.78■■□□□ 1.08
FDPS-216ENST00000491013 CCDC144AA2RUR9 1427 aa21.78■■□□□ 1.08
FDPS-216ENST00000491013 NKTRP30414 1462 aaKnown RBP21.77■■□□□ 1.08
FDPS-216ENST00000491013 TOM1O60784 492 aa21.76■■□□□ 1.07
FDPS-216ENST00000491013 ALKQ9UM73 1620 aa21.76■■□□□ 1.07
FDPS-216ENST00000491013 RPGRIP1LQ68CZ1 1315 aa21.76■■□□□ 1.07
FDPS-216ENST00000491013 PIK3R4Q99570 1358 aa21.75■■□□□ 1.07
FDPS-216ENST00000491013 PROSER2Q86WR7 435 aaPredicted RBP21.73■■□□□ 1.07
FDPS-216ENST00000491013 TMEM94Q12767 1356 aa21.73■■□□□ 1.07
FDPS-216ENST00000491013 SPATA31E1Q6ZUB1 1445 aa21.72■■□□□ 1.07
FDPS-216ENST00000491013 IFT172Q9UG01 1749 aa21.72■■□□□ 1.07
FDPS-216ENST00000491013 VGFO15240 615 aaPredicted RBP21.71■■□□□ 1.07
FDPS-216ENST00000491013 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
FDPS-216ENST00000491013 PTPRUQ92729 1446 aa21.68■■□□□ 1.06
FDPS-216ENST00000491013 XRN1Q8IZH2 1706 aaKnown RBP21.67■■□□□ 1.06
FDPS-216ENST00000491013 ANKRD30BQ9BXX2 1392 aa21.66■■□□□ 1.06
FDPS-216ENST00000491013 PIP4K2BP78356 416 aa21.66■■□□□ 1.06
FDPS-216ENST00000491013 METP08581 1390 aa21.65■■□□□ 1.06
FDPS-216ENST00000491013 RGL3Q3MIN7 710 aa21.65■■□□□ 1.06
FDPS-216ENST00000491013 RBM33Q96EV2 1170 aaKnown RBP21.65■■□□□ 1.06
FDPS-216ENST00000491013 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
FDPS-216ENST00000491013 NCOA3Q9Y6Q9 1424 aa21.64■■□□□ 1.06
FDPS-216ENST00000491013 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
FDPS-216ENST00000491013 MSH6P52701 1360 aa21.61■■□□□ 1.05
FDPS-216ENST00000491013 ADGRF5Q8IZF2 1346 aa21.59■■□□□ 1.05
FDPS-216ENST00000491013 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.58■■□□□ 1.05
FDPS-216ENST00000491013 HSPA1LP34931 641 aa21.56■■□□□ 1.04
FDPS-216ENST00000491013 PIK3C2GO75747 1445 aa21.55■■□□□ 1.04
FDPS-216ENST00000491013 FAM135BQ49AJ0 1406 aa21.55■■□□□ 1.04
FDPS-216ENST00000491013 MYOM2P54296 1465 aa21.54■■□□□ 1.04
FDPS-216ENST00000491013 C19orf44Q9H6X5 657 aa21.54■■□□□ 1.04
FDPS-216ENST00000491013 PRAG1Q86YV5 1406 aa21.54■■□□□ 1.04
FDPS-216ENST00000491013 ROBO1Q9Y6N7 1651 aa21.53■■□□□ 1.04
FDPS-216ENST00000491013 NRXN1Q9ULB1 1477 aa21.53■■□□□ 1.04
FDPS-216ENST00000491013 C14orf37Q86TY3 774 aa21.53■■□□□ 1.04
FDPS-216ENST00000491013 PTCH1Q13635 1447 aa21.52■■□□□ 1.04
FDPS-216ENST00000491013 SLAIN2Q9P270 581 aa21.51■■□□□ 1.03
FDPS-216ENST00000491013 NALCNQ8IZF0 1738 aa21.49■■□□□ 1.03
FDPS-216ENST00000491013 LAMC1P11047 1609 aa21.49■■□□□ 1.03
FDPS-216ENST00000491013 CADPS2Q86UW7 1296 aa21.49■■□□□ 1.03
FDPS-216ENST00000491013 DCCP43146 1447 aa21.48■■□□□ 1.03
FDPS-216ENST00000491013 ASXL1Q8IXJ9 1541 aa21.48■■□□□ 1.03
FDPS-216ENST00000491013 ROBO2Q9HCK4 1378 aa21.48■■□□□ 1.03
FDPS-216ENST00000491013 KNDC1Q76NI1 1749 aa21.47■■□□□ 1.03
FDPS-216ENST00000491013 ATF3P18847 181 aa21.47■■□□□ 1.03
FDPS-216ENST00000491013 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
FDPS-216ENST00000491013 C14orf93Q9H972 538 aaKnown RBP21.47■■□□□ 1.03
FDPS-216ENST00000491013 ADGRL3Q9HAR2 1447 aa21.46■■□□□ 1.03
FDPS-216ENST00000491013 STAC3Q96MF2 364 aa21.45■■□□□ 1.02
FDPS-216ENST00000491013 TECPR2O15040 1411 aa21.45■■□□□ 1.02
FDPS-216ENST00000491013 LRPPRCP42704 1394 aaKnown RBP21.44■■□□□ 1.02
FDPS-216ENST00000491013 TMEM132EQ6IEE7 984 aa21.43■■□□□ 1.02
FDPS-216ENST00000491013 DCAF11Q8TEB1 546 aa21.43■■□□□ 1.02
FDPS-216ENST00000491013 DHX57Q6P158 1386 aaKnown RBP21.43■■□□□ 1.02
FDPS-216ENST00000491013 CFAP70Q5T0N1 1121 aa21.42■■□□□ 1.02
FDPS-216ENST00000491013 ABCC11Q96J66 1382 aa21.42■■□□□ 1.02
FDPS-216ENST00000491013 YTHDC2Q9H6S0 1430 aaKnown RBP21.41■■□□□ 1.02
FDPS-216ENST00000491013 PHLPP1O60346 1717 aa21.41■■□□□ 1.02
FDPS-216ENST00000491013 MST1RQ04912 1400 aa21.4■■□□□ 1.02
FDPS-216ENST00000491013 KDM2AQ9Y2K7 1162 aa21.4■■□□□ 1.02
FDPS-216ENST00000491013 STK26Q9P289 416 aa21.39■■□□□ 1.01
FDPS-216ENST00000491013 ADGRB1O14514 1584 aa21.36■■□□□ 1.01
FDPS-216ENST00000491013 SIRT1Q96EB6 747 aa21.36■■□□□ 1.01
FDPS-216ENST00000491013 AHDC1Q5TGY3 1603 aaPredicted RBP21.36■■□□□ 1.01
FDPS-216ENST00000491013 WAPLQ7Z5K2 1190 aa21.35■■□□□ 1.01
FDPS-216ENST00000491013 DISP3Q9P2K9 1392 aa21.35■■□□□ 1.01
FDPS-216ENST00000491013 COL16A1Q07092 1604 aaPredicted RBP21.34■■□□□ 1.01
FDPS-216ENST00000491013 BRINP3Q76B58 766 aa21.34■■□□□ 1.01
FDPS-216ENST00000491013 MED1Q15648 1581 aaPredicted RBP21.34■■□□□ 1.01
FDPS-216ENST00000491013 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
FDPS-216ENST00000491013 PLEKHH1Q9ULM0 1364 aa21.33■■□□□ 1
FDPS-216ENST00000491013 NHSL1Q5SYE7 1610 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms