RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SCAF11Q99590 1463 aaKnown RBP23.13■■□□□ 1.29
TRA2A-208ENST00000490942 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
TRA2A-208ENST00000490942 STRCQ7RTU9 1775 aa23.11■■□□□ 1.29
TRA2A-208ENST00000490942 TXNDC2Q86VQ3 553 aa23.1■■□□□ 1.29
TRA2A-208ENST00000490942 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
TRA2A-208ENST00000490942 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
TRA2A-208ENST00000490942 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.28
TRA2A-208ENST00000490942 LTKP29376 864 aa23.07■■□□□ 1.28
TRA2A-208ENST00000490942 ZNF326Q5BKZ1 582 aaKnown RBP23.07■■□□□ 1.28
TRA2A-208ENST00000490942 NCKAP5LQ9HCH0 1330 aa23.07■■□□□ 1.28
TRA2A-208ENST00000490942 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
TRA2A-208ENST00000490942 NEXMIFQ5QGS0 1516 aa23.06■■□□□ 1.28
TRA2A-208ENST00000490942 NPHP4O75161 1426 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-208ENST00000490942 PLEKHG1Q9ULL1 1385 aa23.04■■□□□ 1.28
TRA2A-208ENST00000490942 VGFO15240 615 aaPredicted RBP23.04■■□□□ 1.28
TRA2A-208ENST00000490942 PPP1R15AO75807 674 aaPredicted RBP23.02■■□□□ 1.28
TRA2A-208ENST00000490942 IQGAP1P46940 1657 aa23■■□□□ 1.27
TRA2A-208ENST00000490942 RGL3Q3MIN7 710 aa22.98■■□□□ 1.27
TRA2A-208ENST00000490942 PPLO60437 1756 aa22.98■■□□□ 1.27
TRA2A-208ENST00000490942 MYOM2P54296 1465 aa22.98■■□□□ 1.27
TRA2A-208ENST00000490942 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
TRA2A-208ENST00000490942 IFT172Q9UG01 1749 aa22.96■■□□□ 1.27
TRA2A-208ENST00000490942 DIP2AQ14689 1571 aa22.95■■□□□ 1.26
TRA2A-208ENST00000490942 TBX22Q9Y458 520 aa22.94■■□□□ 1.26
TRA2A-208ENST00000490942 NRXN1Q9ULB1 1477 aa22.93■■□□□ 1.26
TRA2A-208ENST00000490942 SIN3AQ96ST3 1273 aa22.93■■□□□ 1.26
TRA2A-208ENST00000490942 ADAMTS13Q76LX8 1427 aa22.92■■□□□ 1.26
TRA2A-208ENST00000490942 PIK3R4Q99570 1358 aa22.91■■□□□ 1.26
TRA2A-208ENST00000490942 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
TRA2A-208ENST00000490942 CCER1Q8TC90 406 aaPredicted RBP22.9■■□□□ 1.26
TRA2A-208ENST00000490942 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
TRA2A-208ENST00000490942 TIMELESSQ9UNS1 1208 aa22.89■■□□□ 1.25
TRA2A-208ENST00000490942 ADGRF5Q8IZF2 1346 aa22.88■■□□□ 1.25
TRA2A-208ENST00000490942 DCAF11Q8TEB1 546 aa22.88■■□□□ 1.25
TRA2A-208ENST00000490942 BCANQ96GW7 911 aa22.88■■□□□ 1.25
TRA2A-208ENST00000490942 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
TRA2A-208ENST00000490942 NEUROD1Q13562 356 aa22.87■■□□□ 1.25
TRA2A-208ENST00000490942 L3MBTL2Q969R5 705 aa22.85■■□□□ 1.25
TRA2A-208ENST00000490942 SLC26A8Q96RN1 970 aa22.85■■□□□ 1.25
TRA2A-208ENST00000490942 TONSLQ96HA7 1378 aa22.84■■□□□ 1.25
TRA2A-208ENST00000490942 ALKQ9UM73 1620 aa22.82■■□□□ 1.24
TRA2A-208ENST00000490942 C14orf93Q9H972 538 aaKnown RBP22.82■■□□□ 1.24
TRA2A-208ENST00000490942 LAMC1P11047 1609 aa22.82■■□□□ 1.24
TRA2A-208ENST00000490942 KCNA6P17658 529 aa22.81■■□□□ 1.24
TRA2A-208ENST00000490942 CPS1P31327 1500 aa22.81■■□□□ 1.24
TRA2A-208ENST00000490942 NWD1Q149M9 1564 aa22.8■■□□□ 1.24
TRA2A-208ENST00000490942 LTBP4Q8N2S1 1624 aa22.79■■□□□ 1.24
TRA2A-208ENST00000490942 PRAG1Q86YV5 1406 aa22.79■■□□□ 1.24
TRA2A-208ENST00000490942 SETD1AO15047 1707 aaKnown RBP22.79■■□□□ 1.24
TRA2A-208ENST00000490942 ZNF335Q9H4Z2 1342 aaPredicted RBP22.79■■□□□ 1.24
TRA2A-208ENST00000490942 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
TRA2A-208ENST00000490942 NKTRP30414 1462 aaKnown RBP22.78■■□□□ 1.24
TRA2A-208ENST00000490942 METP08581 1390 aa22.76■■□□□ 1.23
TRA2A-208ENST00000490942 CHD2O14647 1828 aaKnown RBP22.75■■□□□ 1.23
TRA2A-208ENST00000490942 KIAA1210Q9ULL0 1709 aa22.74■■□□□ 1.23
TRA2A-208ENST00000490942 IQSEC2Q5JU85 1478 aa22.73■■□□□ 1.23
TRA2A-208ENST00000490942 CFAP70Q5T0N1 1121 aa22.72■■□□□ 1.23
TRA2A-208ENST00000490942 PTPRUQ92729 1446 aa22.72■■□□□ 1.23
TRA2A-208ENST00000490942 XRN1Q8IZH2 1706 aaKnown RBP22.71■■□□□ 1.23
TRA2A-208ENST00000490942 AMOTL2Q9Y2J4 779 aa22.71■■□□□ 1.23
TRA2A-208ENST00000490942 LRPPRCP42704 1394 aaKnown RBP22.71■■□□□ 1.23
TRA2A-208ENST00000490942 ABCC11Q96J66 1382 aa22.71■■□□□ 1.23
TRA2A-208ENST00000490942 TECPR2O15040 1411 aa22.71■■□□□ 1.23
TRA2A-208ENST00000490942 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
TRA2A-208ENST00000490942 NCOA3Q9Y6Q9 1424 aa22.7■■□□□ 1.22
TRA2A-208ENST00000490942 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.22
TRA2A-208ENST00000490942 ADGRB1O14514 1584 aa22.7■■□□□ 1.22
TRA2A-208ENST00000490942 STRCP1A6NGW2 1772 aa22.69■■□□□ 1.22
TRA2A-208ENST00000490942 SIRT1Q96EB6 747 aa22.68■■□□□ 1.22
TRA2A-208ENST00000490942 LRRC7Q96NW7 1537 aa22.67■■□□□ 1.22
TRA2A-208ENST00000490942 YTHDC2Q9H6S0 1430 aaKnown RBP22.67■■□□□ 1.22
TRA2A-208ENST00000490942 TMEM132EQ6IEE7 984 aa22.64■■□□□ 1.21
TRA2A-208ENST00000490942 CERKQ8TCT0 537 aa22.64■■□□□ 1.21
TRA2A-208ENST00000490942 KNDC1Q76NI1 1749 aa22.64■■□□□ 1.21
TRA2A-208ENST00000490942 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
TRA2A-208ENST00000490942 PROSER2Q86WR7 435 aaPredicted RBP22.63■■□□□ 1.21
TRA2A-208ENST00000490942 FAM135BQ49AJ0 1406 aa22.63■■□□□ 1.21
TRA2A-208ENST00000490942 GPRASP1Q5JY77 1395 aa22.63■■□□□ 1.21
TRA2A-208ENST00000490942 TRPM1Q7Z4N2 1603 aa22.62■■□□□ 1.21
TRA2A-208ENST00000490942 NBPF8Q3BBV2 869 aa22.62■■□□□ 1.21
TRA2A-208ENST00000490942 TMEM94Q12767 1356 aa22.62■■□□□ 1.21
TRA2A-208ENST00000490942 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
TRA2A-208ENST00000490942 ROBO2Q9HCK4 1378 aa22.6■■□□□ 1.21
TRA2A-208ENST00000490942 NBPF1Q3BBV0 1214 aa22.58■■□□□ 1.21
TRA2A-208ENST00000490942 ROCK2O75116 1388 aaKnown RBP22.58■■□□□ 1.21
TRA2A-208ENST00000490942 STK26Q9P289 416 aa22.56■■□□□ 1.2
TRA2A-208ENST00000490942 DCCP43146 1447 aa22.55■■□□□ 1.2
TRA2A-208ENST00000490942 C19orf44Q9H6X5 657 aa22.54■■□□□ 1.2
TRA2A-208ENST00000490942 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
TRA2A-208ENST00000490942 MSH6P52701 1360 aa22.53■■□□□ 1.2
TRA2A-208ENST00000490942 XIRP1Q702N8 1843 aaKnown RBP22.52■■□□□ 1.2
TRA2A-208ENST00000490942 TRAK1Q9UPV9 953 aa22.51■■□□□ 1.19
TRA2A-208ENST00000490942 EIF3AQ14152 1382 aaKnown RBP22.5■■□□□ 1.19
TRA2A-208ENST00000490942 PRAM1Q96QH2 718 aa22.49■■□□□ 1.19
TRA2A-208ENST00000490942 CARD11Q9BXL7 1154 aa22.49■■□□□ 1.19
TRA2A-208ENST00000490942 C14orf37Q86TY3 774 aa22.48■■□□□ 1.19
TRA2A-208ENST00000490942 CADPS2Q86UW7 1296 aa22.48■■□□□ 1.19
TRA2A-208ENST00000490942 POGKQ9P215 609 aa22.48■■□□□ 1.19
TRA2A-208ENST00000490942 ARHGEF28Q8N1W1 1705 aaKnown RBP22.48■■□□□ 1.19
TRA2A-208ENST00000490942 WAPLQ7Z5K2 1190 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms