RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SCRIBQ14160 1630 aa9.2□□□□□ -0.94
SSX2IP-208ENST00000490476 CDCA7LQ96GN5 454 aa9.19□□□□□ -0.94
SSX2IP-208ENST00000490476 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
SSX2IP-208ENST00000490476 SH3D19Q5HYK7 790 aa9.18□□□□□ -0.94
SSX2IP-208ENST00000490476 ARAP1Q96P48 1450 aa9.18□□□□□ -0.94
SSX2IP-208ENST00000490476 RSPH6AQ9H0K4 717 aa9.18□□□□□ -0.94
SSX2IP-208ENST00000490476 POLR3EQ9NVU0 708 aa9.18□□□□□ -0.94
SSX2IP-208ENST00000490476 PPP4R3BQ5MIZ7 849 aa9.17□□□□□ -0.94
SSX2IP-208ENST00000490476 HOMEZQ8IX15 550 aa9.17□□□□□ -0.94
SSX2IP-208ENST00000490476 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
SSX2IP-208ENST00000490476 COL9A1P20849 921 aa9.16□□□□□ -0.94
SSX2IP-208ENST00000490476 FLIIQ13045 1269 aa9.16□□□□□ -0.94
SSX2IP-208ENST00000490476 TTC13Q8NBP0 860 aa9.16□□□□□ -0.94
SSX2IP-208ENST00000490476 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
SSX2IP-208ENST00000490476 SKIV2LQ15477 1246 aaKnown RBP9.15□□□□□ -0.94
SSX2IP-208ENST00000490476 PROCA1Q8NCQ7 364 aaPredicted RBP9.14□□□□□ -0.95
SSX2IP-208ENST00000490476 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
SSX2IP-208ENST00000490476 PTPREP23469 700 aa9.12□□□□□ -0.95
SSX2IP-208ENST00000490476 PBX2P40425 430 aa9.12□□□□□ -0.95
SSX2IP-208ENST00000490476 BCL2L12Q9HB09 334 aa9.12□□□□□ -0.95
SSX2IP-208ENST00000490476 HECW2Q9P2P5 1572 aa9.12□□□□□ -0.95
SSX2IP-208ENST00000490476 PSDA5PKW4 1024 aaPredicted RBP9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 RCCD1A6NED2 376 aa9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 ARID3AQ99856 593 aa9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 TSKSQ9UJT2 592 aa9.11□□□□□ -0.95
SSX2IP-208ENST00000490476 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.1□□□□□ -0.95
SSX2IP-208ENST00000490476 TBC1D2Q9BYX2 928 aa9.1□□□□□ -0.95
SSX2IP-208ENST00000490476 DISP3Q9P2K9 1392 aa9.1□□□□□ -0.95
SSX2IP-208ENST00000490476 LAMC3Q9Y6N6 1575 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 ARID3CA6NKF2 412 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 PPP1R3GB7ZBB8 358 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 ONECUT3O60422 494 aaPredicted RBP9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 EYA1Q99502 592 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 PNMA3Q9UL41 463 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 WDR62O43379 1518 aa9.09□□□□□ -0.95
SSX2IP-208ENST00000490476 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
SSX2IP-208ENST00000490476 UBTFP17480 764 aaKnown RBP9.08□□□□□ -0.96
SSX2IP-208ENST00000490476 CLUAP1Q96AJ1 413 aa9.08□□□□□ -0.96
SSX2IP-208ENST00000490476 KCNK17Q96T54 332 aa9.08□□□□□ -0.96
SSX2IP-208ENST00000490476 DDX11L8A8MPP1 907 aa9.07□□□□□ -0.96
SSX2IP-208ENST00000490476 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
SSX2IP-208ENST00000490476 CLK2P49760 499 aaKnown RBP9.07□□□□□ -0.96
SSX2IP-208ENST00000490476 PACS2Q86VP3 889 aa9.07□□□□□ -0.96
SSX2IP-208ENST00000490476 TATDN2Q93075 761 aa9.07□□□□□ -0.96
SSX2IP-208ENST00000490476 TRIM6-TRIM34B2RNG4 842 aa9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 SMAPO00193 183 aa9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 PROX2Q3B8N5 592 aa9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 MYT1LQ9UL68 1186 aa9.06□□□□□ -0.96
SSX2IP-208ENST00000490476 APBB1O00213 710 aa9.05□□□□□ -0.96
SSX2IP-208ENST00000490476 DNAJB2P25686 324 aa9.05□□□□□ -0.96
SSX2IP-208ENST00000490476 MCM6Q14566 821 aa9.05□□□□□ -0.96
SSX2IP-208ENST00000490476 NUTM1Q86Y26 1132 aa9.05□□□□□ -0.96
SSX2IP-208ENST00000490476 DIXDC1Q155Q3 683 aa9.04□□□□□ -0.96
SSX2IP-208ENST00000490476 CSPP1Q1MSJ5 1256 aa9.04□□□□□ -0.96
SSX2IP-208ENST00000490476 SULF1Q8IWU6 871 aa9.04□□□□□ -0.96
SSX2IP-208ENST00000490476 SPIRE2Q8WWL2 714 aa9.04□□□□□ -0.96
SSX2IP-208ENST00000490476 KCNH8Q96L42 1107 aa9.04□□□□□ -0.96
SSX2IP-208ENST00000490476 MRC2Q9UBG0 1479 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 CD46P15529 392 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 ANKRD13DQ6ZTN6 518 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 RIC3Q7Z5B4 369 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 RDH13Q8NBN7 331 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 C1orf115Q9H7X2 142 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 LIMD1Q9UGP4 676 aa9.03□□□□□ -0.96
SSX2IP-208ENST00000490476 POTEEQ6S8J3 1075 aa9.02□□□□□ -0.97
SSX2IP-208ENST00000490476 SPATA31D1Q6ZQQ2 1576 aa9.02□□□□□ -0.97
SSX2IP-208ENST00000490476 ARHGAP33O14559 1287 aa9.01□□□□□ -0.97
SSX2IP-208ENST00000490476 TMEM134Q9H6X4 195 aa9.01□□□□□ -0.97
SSX2IP-208ENST00000490476 KIAA1468Q9P260 1216 aa9.01□□□□□ -0.97
SSX2IP-208ENST00000490476 NCAPD3P42695 1498 aa9.01□□□□□ -0.97
SSX2IP-208ENST00000490476 A6NJR5 290 aa9□□□□□ -0.97
SSX2IP-208ENST00000490476 RFC5P40937 340 aa9□□□□□ -0.97
SSX2IP-208ENST00000490476 PDS5BQ9NTI5 1447 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 MOXD2PA6NHM9 499 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 RAD21O60216 631 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 TRAK2O60296 914 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 NDUFV2P19404 249 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 PSEN2P49810 448 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 FBXO31Q5XUX0 539 aaPredicted RBP8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 POM121Q96HA1 1249 aa8.99□□□□□ -0.97
SSX2IP-208ENST00000490476 SNRKQ9NRH2 765 aa8.98□□□□□ -0.97
SSX2IP-208ENST00000490476 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
SSX2IP-208ENST00000490476 AXIN2Q9Y2T1 843 aa8.97□□□□□ -0.97
SSX2IP-208ENST00000490476 TK2O00142 265 aa8.96□□□□□ -0.98
SSX2IP-208ENST00000490476 SPTLC1O15269 473 aa8.96□□□□□ -0.98
SSX2IP-208ENST00000490476 SPDYE5A6NIY4 337 aa8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 NUTM2BA6NNL0 878 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 NUTM2EB1AL46 878 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 NUTM2DQ5VT03 806 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 PROSER2Q86WR7 435 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 NUTM2AQ8IVF1 878 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 ZBED2Q9BTP6 218 aa8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 SEPT9Q9UHD8 586 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 ZNF777Q9ULD5 760 aaPredicted RBP8.95□□□□□ -0.98
SSX2IP-208ENST00000490476 PCDHB15Q9Y5E8 787 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms