RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 LTKP29376 864 aa16.33■□□□□ 0.2
CPSF7-212ENST00000489728 CHGAP10645 457 aaKnown RBP16.32■□□□□ 0.2
CPSF7-212ENST00000489728 PLEKHG1Q9ULL1 1385 aa16.32■□□□□ 0.2
CPSF7-212ENST00000489728 FOXD1Q16676 465 aa16.31■□□□□ 0.2
CPSF7-212ENST00000489728 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
CPSF7-212ENST00000489728 NEXMIFQ5QGS0 1516 aa16.3■□□□□ 0.2
CPSF7-212ENST00000489728 ANKRD30BQ9BXX2 1392 aa16.3■□□□□ 0.2
CPSF7-212ENST00000489728 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
CPSF7-212ENST00000489728 SPATA31E1Q6ZUB1 1445 aa16.29■□□□□ 0.2
CPSF7-212ENST00000489728 LTBP4Q8N2S1 1624 aa16.29■□□□□ 0.2
CPSF7-212ENST00000489728 PPP1R15AO75807 674 aaPredicted RBP16.28■□□□□ 0.2
CPSF7-212ENST00000489728 SETBP1Q9Y6X0 1596 aa16.27■□□□□ 0.2
CPSF7-212ENST00000489728 CPS1P31327 1500 aa16.27■□□□□ 0.2
CPSF7-212ENST00000489728 IQSEC2Q5JU85 1478 aa16.27■□□□□ 0.19
CPSF7-212ENST00000489728 PPLO60437 1756 aa16.26■□□□□ 0.19
CPSF7-212ENST00000489728 ZNF326Q5BKZ1 582 aaKnown RBP16.26■□□□□ 0.19
CPSF7-212ENST00000489728 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
CPSF7-212ENST00000489728 ZNF335Q9H4Z2 1342 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-212ENST00000489728 VGFO15240 615 aaPredicted RBP16.23■□□□□ 0.19
CPSF7-212ENST00000489728 PIK3R4Q99570 1358 aa16.23■□□□□ 0.19
CPSF7-212ENST00000489728 NWD1Q149M9 1564 aa16.22■□□□□ 0.19
CPSF7-212ENST00000489728 ADAMTS13Q76LX8 1427 aa16.22■□□□□ 0.19
CPSF7-212ENST00000489728 TBX22Q9Y458 520 aa16.22■□□□□ 0.19
CPSF7-212ENST00000489728 NRXN3Q9Y4C0 1643 aa16.22■□□□□ 0.19
CPSF7-212ENST00000489728 MYOM2P54296 1465 aa16.21■□□□□ 0.19
CPSF7-212ENST00000489728 CERKQ8TCT0 537 aa16.2■□□□□ 0.18
CPSF7-212ENST00000489728 NKTRP30414 1462 aaKnown RBP16.2■□□□□ 0.18
CPSF7-212ENST00000489728 DHX57Q6P158 1386 aaKnown RBP16.19■□□□□ 0.18
CPSF7-212ENST00000489728 STAC3Q96MF2 364 aa16.19■□□□□ 0.18
CPSF7-212ENST00000489728 CHD2O14647 1828 aaKnown RBP16.18■□□□□ 0.18
CPSF7-212ENST00000489728 BCANQ96GW7 911 aa16.18■□□□□ 0.18
CPSF7-212ENST00000489728 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
CPSF7-212ENST00000489728 SLC26A8Q96RN1 970 aa16.17■□□□□ 0.18
CPSF7-212ENST00000489728 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
CPSF7-212ENST00000489728 KCNA6P17658 529 aa16.16■□□□□ 0.18
CPSF7-212ENST00000489728 NUTM2DQ5VT03 806 aaPredicted RBP16.16■□□□□ 0.18
CPSF7-212ENST00000489728 SETD1AO15047 1707 aaKnown RBP16.16■□□□□ 0.18
CPSF7-212ENST00000489728 LAMC1P11047 1609 aa16.16■□□□□ 0.18
CPSF7-212ENST00000489728 PIK3C2GO75747 1445 aa16.15■□□□□ 0.18
CPSF7-212ENST00000489728 RGL3Q3MIN7 710 aa16.15■□□□□ 0.18
CPSF7-212ENST00000489728 LRRC7Q96NW7 1537 aa16.14■□□□□ 0.18
CPSF7-212ENST00000489728 PRAG1Q86YV5 1406 aa16.14■□□□□ 0.17
CPSF7-212ENST00000489728 ALKQ9UM73 1620 aa16.14■□□□□ 0.17
CPSF7-212ENST00000489728 XRN1Q8IZH2 1706 aaKnown RBP16.13■□□□□ 0.17
CPSF7-212ENST00000489728 NCOA3Q9Y6Q9 1424 aa16.11■□□□□ 0.17
CPSF7-212ENST00000489728 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
CPSF7-212ENST00000489728 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
CPSF7-212ENST00000489728 FBXO41Q8TF61 875 aa16.09■□□□□ 0.17
CPSF7-212ENST00000489728 METP08581 1390 aa16.09■□□□□ 0.17
CPSF7-212ENST00000489728 PTCH1Q13635 1447 aa16.08■□□□□ 0.16
CPSF7-212ENST00000489728 PTPRUQ92729 1446 aa16.08■□□□□ 0.16
CPSF7-212ENST00000489728 XIRP1Q702N8 1843 aaKnown RBP16.08■□□□□ 0.16
CPSF7-212ENST00000489728 TMEM94Q12767 1356 aa16.06■□□□□ 0.16
CPSF7-212ENST00000489728 CLSPNQ9HAW4 1339 aa16.06■□□□□ 0.16
CPSF7-212ENST00000489728 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
CPSF7-212ENST00000489728 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
CPSF7-212ENST00000489728 TECPR2O15040 1411 aa16.05■□□□□ 0.16
CPSF7-212ENST00000489728 C14orf93Q9H972 538 aaKnown RBP16.05■□□□□ 0.16
CPSF7-212ENST00000489728 AMOTL2Q9Y2J4 779 aa16.05■□□□□ 0.16
CPSF7-212ENST00000489728 PROSER2Q86WR7 435 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-212ENST00000489728 SENP3Q9H4L4 574 aaPredicted RBP16.04■□□□□ 0.16
CPSF7-212ENST00000489728 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
CPSF7-212ENST00000489728 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
CPSF7-212ENST00000489728 LRPPRCP42704 1394 aaKnown RBP16.02■□□□□ 0.16
CPSF7-212ENST00000489728 DCCP43146 1447 aa16.02■□□□□ 0.15
CPSF7-212ENST00000489728 MSH6P52701 1360 aa16.01■□□□□ 0.15
CPSF7-212ENST00000489728 TOM1O60784 492 aa16.01■□□□□ 0.15
CPSF7-212ENST00000489728 ABCC11Q96J66 1382 aa16■□□□□ 0.15
CPSF7-212ENST00000489728 ADGRB1O14514 1584 aa16■□□□□ 0.15
CPSF7-212ENST00000489728 SIN3AQ96ST3 1273 aa16■□□□□ 0.15
CPSF7-212ENST00000489728 YTHDC2Q9H6S0 1430 aaKnown RBP16■□□□□ 0.15
CPSF7-212ENST00000489728 KDM2AQ9Y2K7 1162 aa15.99■□□□□ 0.15
CPSF7-212ENST00000489728 DLC1Q96QB1 1528 aa15.99■□□□□ 0.15
CPSF7-212ENST00000489728 UBAP1LF5GYI3 381 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 FAM135BQ49AJ0 1406 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 L3MBTL2Q969R5 705 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 SIRT1Q96EB6 747 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 ROBO2Q9HCK4 1378 aa15.98■□□□□ 0.15
CPSF7-212ENST00000489728 ADGRL3Q9HAR2 1447 aa15.97■□□□□ 0.15
CPSF7-212ENST00000489728 NEUROD1Q13562 356 aa15.97■□□□□ 0.15
CPSF7-212ENST00000489728 TONSLQ96HA7 1378 aa15.97■□□□□ 0.15
CPSF7-212ENST00000489728 C19orf44Q9H6X5 657 aa15.96■□□□□ 0.15
CPSF7-212ENST00000489728 NALCNQ8IZF0 1738 aa15.96■□□□□ 0.15
CPSF7-212ENST00000489728 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.96■□□□□ 0.15
CPSF7-212ENST00000489728 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
CPSF7-212ENST00000489728 CDC42BPGQ6DT37 1551 aa15.93■□□□□ 0.14
CPSF7-212ENST00000489728 TMEM132EQ6IEE7 984 aa15.93■□□□□ 0.14
CPSF7-212ENST00000489728 ILDR1Q86SU0 546 aaPredicted RBP15.93■□□□□ 0.14
CPSF7-212ENST00000489728 C14orf37Q86TY3 774 aa15.93■□□□□ 0.14
CPSF7-212ENST00000489728 TIMELESSQ9UNS1 1208 aa15.93■□□□□ 0.14
CPSF7-212ENST00000489728 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
CPSF7-212ENST00000489728 ATF3P18847 181 aa15.91■□□□□ 0.14
CPSF7-212ENST00000489728 RBM33Q96EV2 1170 aaKnown RBP15.91■□□□□ 0.14
CPSF7-212ENST00000489728 STK26Q9P289 416 aa15.9■□□□□ 0.14
CPSF7-212ENST00000489728 ARHGEF28Q8N1W1 1705 aaKnown RBP15.89■□□□□ 0.13
CPSF7-212ENST00000489728 ADGRB2O60241 1585 aa15.89■□□□□ 0.13
CPSF7-212ENST00000489728 CCER1Q8TC90 406 aaPredicted RBP15.88■□□□□ 0.13
CPSF7-212ENST00000489728 SLAIN2Q9P270 581 aa15.88■□□□□ 0.13
CPSF7-212ENST00000489728 GPRASP1Q5JY77 1395 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms