RNA–Protein interactions for RNA: ENST00000489559.1

ACAA1-218, Transcript of acetyl-CoA acyltransferase 1, humanhuman

TSL 4

Gene ACAA1, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1-218ENST00000489559 CLTCL1P53675 1640 aa33.39■■■□□ 2.94
ACAA1-218ENST00000489559 PPP1R15AO75807 674 aaPredicted RBP33.36■■■□□ 2.93
ACAA1-218ENST00000489559 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.36■■■□□ 2.93
ACAA1-218ENST00000489559 PLEKHG1Q9ULL1 1385 aa33.35■■■□□ 2.93
ACAA1-218ENST00000489559 SETD5Q9C0A6 1442 aa33.35■■■□□ 2.93
ACAA1-218ENST00000489559 KIF1BO60333 1816 aa33.34■■■□□ 2.93
ACAA1-218ENST00000489559 BCANQ96GW7 911 aa33.32■■■□□ 2.92
ACAA1-218ENST00000489559 SLC26A8Q96RN1 970 aa33.32■■■□□ 2.92
ACAA1-218ENST00000489559 LRRC7Q96NW7 1537 aa33.32■■■□□ 2.92
ACAA1-218ENST00000489559 ACIN1Q9UKV3 1341 aaKnown RBP33.31■■■□□ 2.92
ACAA1-218ENST00000489559 UBAP1LF5GYI3 381 aa33.3■■■□□ 2.92
ACAA1-218ENST00000489559 NUTM2DQ5VT03 806 aaPredicted RBP33.26■■■□□ 2.91
ACAA1-218ENST00000489559 SENP3Q9H4L4 574 aaPredicted RBP33.25■■■□□ 2.91
ACAA1-218ENST00000489559 MPHOSPH9Q99550 1183 aa33.24■■■□□ 2.91
ACAA1-218ENST00000489559 NWD1Q149M9 1564 aa33.24■■■□□ 2.91
ACAA1-218ENST00000489559 KCNA6P17658 529 aa33.23■■■□□ 2.91
ACAA1-218ENST00000489559 ZNF326Q5BKZ1 582 aaKnown RBP33.23■■■□□ 2.91
ACAA1-218ENST00000489559 RAB3GAP2Q9H2M9 1393 aa33.22■■■□□ 2.91
ACAA1-218ENST00000489559 DIP2AQ14689 1571 aa33.22■■■□□ 2.91
ACAA1-218ENST00000489559 XIRP1Q702N8 1843 aaKnown RBP33.22■■■□□ 2.91
ACAA1-218ENST00000489559 CHD2O14647 1828 aaKnown RBP33.21■■■□□ 2.91
ACAA1-218ENST00000489559 FOXD1Q16676 465 aa33.2■■■□□ 2.91
ACAA1-218ENST00000489559 ADAMTS13Q76LX8 1427 aa33.19■■■□□ 2.9
ACAA1-218ENST00000489559 NEXMIFQ5QGS0 1516 aa33.19■■■□□ 2.9
ACAA1-218ENST00000489559 TOM1O60784 492 aa33.19■■■□□ 2.9
ACAA1-218ENST00000489559 TBX22Q9Y458 520 aa33.19■■■□□ 2.9
ACAA1-218ENST00000489559 NKTRP30414 1462 aaKnown RBP33.17■■■□□ 2.9
ACAA1-218ENST00000489559 SETBP1Q9Y6X0 1596 aa33.14■■■□□ 2.9
ACAA1-218ENST00000489559 ALKQ9UM73 1620 aa33.13■■■□□ 2.89
ACAA1-218ENST00000489559 NRXN3Q9Y4C0 1643 aa33.13■■■□□ 2.89
ACAA1-218ENST00000489559 CCDC144AA2RUR9 1427 aa33.11■■■□□ 2.89
ACAA1-218ENST00000489559 PIK3R4Q99570 1358 aa33.1■■■□□ 2.89
ACAA1-218ENST00000489559 PROSER2Q86WR7 435 aaPredicted RBP33.1■■■□□ 2.89
ACAA1-218ENST00000489559 TMEM94Q12767 1356 aa33.09■■■□□ 2.89
ACAA1-218ENST00000489559 SCAF1Q9H7N4 1312 aaKnown RBP33.07■■■□□ 2.88
ACAA1-218ENST00000489559 PPLO60437 1756 aa33.07■■■□□ 2.88
ACAA1-218ENST00000489559 PIP4K2BP78356 416 aa33.07■■■□□ 2.88
ACAA1-218ENST00000489559 RPGRIP1LQ68CZ1 1315 aa33.05■■■□□ 2.88
ACAA1-218ENST00000489559 HRCP23327 699 aa33.03■■■□□ 2.88
ACAA1-218ENST00000489559 VGFO15240 615 aaPredicted RBP33.02■■■□□ 2.88
ACAA1-218ENST00000489559 RBM33Q96EV2 1170 aaKnown RBP33■■■□□ 2.87
ACAA1-218ENST00000489559 SPATA31E1Q6ZUB1 1445 aa33■■■□□ 2.87
ACAA1-218ENST00000489559 PTPRUQ92729 1446 aa32.98■■■□□ 2.87
ACAA1-218ENST00000489559 XRN1Q8IZH2 1706 aaKnown RBP32.97■■■□□ 2.87
ACAA1-218ENST00000489559 IFT172Q9UG01 1749 aa32.97■■■□□ 2.87
ACAA1-218ENST00000489559 AMOTL2Q9Y2J4 779 aa32.95■■■□□ 2.87
ACAA1-218ENST00000489559 NCOA3Q9Y6Q9 1424 aa32.94■■■□□ 2.86
ACAA1-218ENST00000489559 SETD1AO15047 1707 aaKnown RBP32.94■■■□□ 2.86
ACAA1-218ENST00000489559 METP08581 1390 aa32.94■■■□□ 2.86
ACAA1-218ENST00000489559 MSH6P52701 1360 aa32.94■■■□□ 2.86
ACAA1-218ENST00000489559 RGL3Q3MIN7 710 aa32.92■■■□□ 2.86
ACAA1-218ENST00000489559 HSPA1LP34931 641 aa32.9■■■□□ 2.86
ACAA1-218ENST00000489559 ANKRD30BQ9BXX2 1392 aa32.88■■■□□ 2.85
ACAA1-218ENST00000489559 C14orf37Q86TY3 774 aa32.84■■■□□ 2.85
ACAA1-218ENST00000489559 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.84■■■□□ 2.85
ACAA1-218ENST00000489559 ADGRF5Q8IZF2 1346 aa32.82■■■□□ 2.84
ACAA1-218ENST00000489559 FAM135BQ49AJ0 1406 aa32.82■■■□□ 2.84
ACAA1-218ENST00000489559 ROBO1Q9Y6N7 1651 aa32.81■■■□□ 2.84
ACAA1-218ENST00000489559 C19orf44Q9H6X5 657 aa32.79■■■□□ 2.84
ACAA1-218ENST00000489559 SLAIN2Q9P270 581 aa32.75■■■□□ 2.83
ACAA1-218ENST00000489559 PIK3C2GO75747 1445 aa32.75■■■□□ 2.83
ACAA1-218ENST00000489559 CADPS2Q86UW7 1296 aa32.74■■■□□ 2.83
ACAA1-218ENST00000489559 PTCH1Q13635 1447 aa32.74■■■□□ 2.83
ACAA1-218ENST00000489559 PRAG1Q86YV5 1406 aa32.74■■■□□ 2.83
ACAA1-218ENST00000489559 MYOM2P54296 1465 aa32.74■■■□□ 2.83
ACAA1-218ENST00000489559 DCCP43146 1447 aa32.72■■■□□ 2.83
ACAA1-218ENST00000489559 ATF3P18847 181 aa32.72■■■□□ 2.83
ACAA1-218ENST00000489559 NALCNQ8IZF0 1738 aa32.71■■■□□ 2.83
ACAA1-218ENST00000489559 NRXN1Q9ULB1 1477 aa32.7■■■□□ 2.83
ACAA1-218ENST00000489559 ADGRL3Q9HAR2 1447 aa32.68■■■□□ 2.82
ACAA1-218ENST00000489559 LAMC1P11047 1609 aa32.67■■■□□ 2.82
ACAA1-218ENST00000489559 ROBO2Q9HCK4 1378 aa32.67■■■□□ 2.82
ACAA1-218ENST00000489559 DISP3Q9P2K9 1392 aa32.66■■■□□ 2.82
ACAA1-218ENST00000489559 ASXL1Q8IXJ9 1541 aa32.66■■■□□ 2.82
ACAA1-218ENST00000489559 KNDC1Q76NI1 1749 aa32.63■■■□□ 2.81
ACAA1-218ENST00000489559 PHLPP1O60346 1717 aa32.62■■■□□ 2.81
ACAA1-218ENST00000489559 LRPPRCP42704 1394 aaKnown RBP32.61■■■□□ 2.81
ACAA1-218ENST00000489559 C14orf93Q9H972 538 aaKnown RBP32.61■■■□□ 2.81
ACAA1-218ENST00000489559 TECPR2O15040 1411 aa32.6■■■□□ 2.81
ACAA1-218ENST00000489559 MED1Q15648 1581 aaPredicted RBP32.59■■■□□ 2.81
ACAA1-218ENST00000489559 TMEM132EQ6IEE7 984 aa32.59■■■□□ 2.81
ACAA1-218ENST00000489559 MST1RQ04912 1400 aa32.59■■■□□ 2.81
ACAA1-218ENST00000489559 ABCC11Q96J66 1382 aa32.57■■■□□ 2.8
ACAA1-218ENST00000489559 STK26Q9P289 416 aa32.56■■■□□ 2.8
ACAA1-218ENST00000489559 YTHDC2Q9H6S0 1430 aaKnown RBP32.56■■■□□ 2.8
ACAA1-218ENST00000489559 CFAP70Q5T0N1 1121 aa32.55■■■□□ 2.8
ACAA1-218ENST00000489559 DCAF11Q8TEB1 546 aa32.55■■■□□ 2.8
ACAA1-218ENST00000489559 STAC3Q96MF2 364 aa32.55■■■□□ 2.8
ACAA1-218ENST00000489559 AHDC1Q5TGY3 1603 aaPredicted RBP32.53■■■□□ 2.8
ACAA1-218ENST00000489559 KDM2AQ9Y2K7 1162 aa32.53■■■□□ 2.8
ACAA1-218ENST00000489559 DHX57Q6P158 1386 aaKnown RBP32.52■■■□□ 2.8
ACAA1-218ENST00000489559 COL16A1Q07092 1604 aaPredicted RBP32.51■■■□□ 2.8
ACAA1-218ENST00000489559 BRINP3Q76B58 766 aa32.51■■■□□ 2.79
ACAA1-218ENST00000489559 TRIM26Q12899 539 aaPredicted RBP32.5■■■□□ 2.79
ACAA1-218ENST00000489559 CDC42BPGQ6DT37 1551 aa32.48■■■□□ 2.79
ACAA1-218ENST00000489559 WAPLQ7Z5K2 1190 aa32.46■■■□□ 2.79
ACAA1-218ENST00000489559 ADGRB1O14514 1584 aa32.45■■■□□ 2.79
ACAA1-218ENST00000489559 NHSL1Q5SYE7 1610 aa32.45■■■□□ 2.79
ACAA1-218ENST00000489559 SIRT1Q96EB6 747 aa32.45■■■□□ 2.79
ACAA1-218ENST00000489559 C1orf167Q5SNV9 1468 aa32.45■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms