RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
SF1-218ENST00000489544 SLIT1O75093 1534 aa12.11□□□□□ -0.47
SF1-218ENST00000489544 ZFYVE9O95405 1425 aa12.11□□□□□ -0.47
SF1-218ENST00000489544 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
SF1-218ENST00000489544 KDM5AP29375 1690 aaKnown RBP12.1□□□□□ -0.47
SF1-218ENST00000489544 NEURL4Q96JN8 1562 aa12.09□□□□□ -0.47
SF1-218ENST00000489544 PPP1R15AO75807 674 aaPredicted RBP12.09□□□□□ -0.47
SF1-218ENST00000489544 EID1Q9Y6B2 187 aa12.09□□□□□ -0.47
SF1-218ENST00000489544 KIF1BO60333 1816 aa12.09□□□□□ -0.47
SF1-218ENST00000489544 SCAF11Q99590 1463 aaKnown RBP12.08□□□□□ -0.47
SF1-218ENST00000489544 NEXMIFQ5QGS0 1516 aa12.07□□□□□ -0.48
SF1-218ENST00000489544 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
SF1-218ENST00000489544 BCANQ96GW7 911 aa12.07□□□□□ -0.48
SF1-218ENST00000489544 CCER1Q8TC90 406 aaPredicted RBP12.06□□□□□ -0.48
SF1-218ENST00000489544 SLC26A8Q96RN1 970 aa12.06□□□□□ -0.48
SF1-218ENST00000489544 ADGRF5Q8IZF2 1346 aa12.06□□□□□ -0.48
SF1-218ENST00000489544 POLR1AO95602 1720 aaPredicted RBP12.06□□□□□ -0.48
SF1-218ENST00000489544 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.05□□□□□ -0.48
SF1-218ENST00000489544 KDM2AQ9Y2K7 1162 aa12.05□□□□□ -0.48
SF1-218ENST00000489544 MED14O60244 1454 aa12.05□□□□□ -0.48
SF1-218ENST00000489544 HDGFP51858 240 aaKnown RBP12.04□□□□□ -0.48
SF1-218ENST00000489544 RPGRIP1LQ68CZ1 1315 aa12.04□□□□□ -0.48
SF1-218ENST00000489544 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
SF1-218ENST00000489544 DMRT2Q9Y5R5 561 aa12.03□□□□□ -0.48
SF1-218ENST00000489544 PLEKHG1Q9ULL1 1385 aa12.03□□□□□ -0.48
SF1-218ENST00000489544 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
SF1-218ENST00000489544 L3MBTL2Q969R5 705 aa12.02□□□□□ -0.49
SF1-218ENST00000489544 IQGAP1P46940 1657 aa12.02□□□□□ -0.49
SF1-218ENST00000489544 ADAMTS13Q76LX8 1427 aa12.02□□□□□ -0.49
SF1-218ENST00000489544 PPLO60437 1756 aa12.01□□□□□ -0.49
SF1-218ENST00000489544 ZNF335Q9H4Z2 1342 aaPredicted RBP12.01□□□□□ -0.49
SF1-218ENST00000489544 IFT172Q9UG01 1749 aa12□□□□□ -0.49
SF1-218ENST00000489544 NRXN3Q9Y4C0 1643 aa11.99□□□□□ -0.49
SF1-218ENST00000489544 METP08581 1390 aa11.98□□□□□ -0.49
SF1-218ENST00000489544 CFAP70Q5T0N1 1121 aa11.98□□□□□ -0.49
SF1-218ENST00000489544 CERKQ8TCT0 537 aa11.98□□□□□ -0.49
SF1-218ENST00000489544 SETBP1Q9Y6X0 1596 aa11.97□□□□□ -0.49
SF1-218ENST00000489544 TBX22Q9Y458 520 aa11.97□□□□□ -0.49
SF1-218ENST00000489544 MYOM2P54296 1465 aa11.96□□□□□ -0.49
SF1-218ENST00000489544 PIK3C2GO75747 1445 aa11.96□□□□□ -0.49
SF1-218ENST00000489544 TONSLQ96HA7 1378 aa11.96□□□□□ -0.49
SF1-218ENST00000489544 TMEM132EQ6IEE7 984 aa11.96□□□□□ -0.49
SF1-218ENST00000489544 RBM33Q96EV2 1170 aaKnown RBP11.96□□□□□ -0.49
SF1-218ENST00000489544 ALKQ9UM73 1620 aa11.96□□□□□ -0.5
SF1-218ENST00000489544 NRXN1Q9ULB1 1477 aa11.95□□□□□ -0.5
SF1-218ENST00000489544 PTPRUQ92729 1446 aa11.95□□□□□ -0.5
SF1-218ENST00000489544 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
SF1-218ENST00000489544 NBPF8Q3BBV2 869 aa11.94□□□□□ -0.5
SF1-218ENST00000489544 C14orf93Q9H972 538 aaKnown RBP11.94□□□□□ -0.5
SF1-218ENST00000489544 STRCP1A6NGW2 1772 aa11.94□□□□□ -0.5
SF1-218ENST00000489544 LTBP4Q8N2S1 1624 aa11.93□□□□□ -0.5
SF1-218ENST00000489544 KCNA6P17658 529 aa11.93□□□□□ -0.5
SF1-218ENST00000489544 AMOTL2Q9Y2J4 779 aa11.93□□□□□ -0.5
SF1-218ENST00000489544 PRAG1Q86YV5 1406 aa11.93□□□□□ -0.5
SF1-218ENST00000489544 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
SF1-218ENST00000489544 SETD1AO15047 1707 aaKnown RBP11.92□□□□□ -0.5
SF1-218ENST00000489544 NBPF1Q3BBV0 1214 aa11.92□□□□□ -0.5
SF1-218ENST00000489544 STK26Q9P289 416 aa11.92□□□□□ -0.5
SF1-218ENST00000489544 DIP2AQ14689 1571 aa11.92□□□□□ -0.5
SF1-218ENST00000489544 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
SF1-218ENST00000489544 PROSER2Q86WR7 435 aaPredicted RBP11.89□□□□□ -0.51
SF1-218ENST00000489544 PIK3R4Q99570 1358 aa11.89□□□□□ -0.51
SF1-218ENST00000489544 NWD1Q149M9 1564 aa11.88□□□□□ -0.51
SF1-218ENST00000489544 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
SF1-218ENST00000489544 LRRC7Q96NW7 1537 aa11.88□□□□□ -0.51
SF1-218ENST00000489544 MSH5O43196 834 aa11.88□□□□□ -0.51
SF1-218ENST00000489544 ROBO2Q9HCK4 1378 aa11.88□□□□□ -0.51
SF1-218ENST00000489544 ADGRB1O14514 1584 aa11.88□□□□□ -0.51
SF1-218ENST00000489544 YTHDC2Q9H6S0 1430 aaKnown RBP11.87□□□□□ -0.51
SF1-218ENST00000489544 WAPLQ7Z5K2 1190 aa11.87□□□□□ -0.51
SF1-218ENST00000489544 TRAK1Q9UPV9 953 aa11.87□□□□□ -0.51
SF1-218ENST00000489544 LRPPRCP42704 1394 aaKnown RBP11.87□□□□□ -0.51
SF1-218ENST00000489544 TMEM94Q12767 1356 aa11.87□□□□□ -0.51
SF1-218ENST00000489544 CPS1P31327 1500 aa11.86□□□□□ -0.51
SF1-218ENST00000489544 XRN1Q8IZH2 1706 aaKnown RBP11.86□□□□□ -0.51
SF1-218ENST00000489544 PLEKHH1Q9ULM0 1364 aa11.86□□□□□ -0.51
SF1-218ENST00000489544 NKTRP30414 1462 aaKnown RBP11.85□□□□□ -0.51
SF1-218ENST00000489544 SAFB2Q14151 953 aaKnown RBP eCLIP11.85□□□□□ -0.51
SF1-218ENST00000489544 PIAS4Q8N2W9 510 aaPredicted RBP11.85□□□□□ -0.51
SF1-218ENST00000489544 ABCC11Q96J66 1382 aa11.84□□□□□ -0.51
SF1-218ENST00000489544 TIMELESSQ9UNS1 1208 aa11.84□□□□□ -0.51
SF1-218ENST00000489544 LAMC1P11047 1609 aa11.84□□□□□ -0.51
SF1-218ENST00000489544 TRPM1Q7Z4N2 1603 aa11.84□□□□□ -0.51
SF1-218ENST00000489544 ROCK2O75116 1388 aaKnown RBP11.83□□□□□ -0.52
SF1-218ENST00000489544 C14orf37Q86TY3 774 aa11.83□□□□□ -0.52
SF1-218ENST00000489544 PRAM1Q96QH2 718 aa11.83□□□□□ -0.52
SF1-218ENST00000489544 XIRP1Q702N8 1843 aaKnown RBP11.82□□□□□ -0.52
SF1-218ENST00000489544 ADRA2BP18089 450 aa11.82□□□□□ -0.52
SF1-218ENST00000489544 TECPR2O15040 1411 aa11.82□□□□□ -0.52
SF1-218ENST00000489544 PTCH1Q13635 1447 aa11.82□□□□□ -0.52
SF1-218ENST00000489544 KIAA1210Q9ULL0 1709 aa11.81□□□□□ -0.52
SF1-218ENST00000489544 CARD11Q9BXL7 1154 aa11.81□□□□□ -0.52
SF1-218ENST00000489544 RALGAPBQ86X10 1494 aa11.81□□□□□ -0.52
SF1-218ENST00000489544 POGKQ9P215 609 aa11.8□□□□□ -0.52
SF1-218ENST00000489544 GPRASP1Q5JY77 1395 aa11.79□□□□□ -0.52
SF1-218ENST00000489544 HIRIP3Q9BW71 556 aaPredicted RBP11.79□□□□□ -0.52
SF1-218ENST00000489544 KNDC1Q76NI1 1749 aa11.79□□□□□ -0.52
SF1-218ENST00000489544 MINK1Q8N4C8 1332 aaPredicted RBP11.79□□□□□ -0.52
SF1-218ENST00000489544 FAM135BQ49AJ0 1406 aa11.78□□□□□ -0.52
SF1-218ENST00000489544 DLC1Q96QB1 1528 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms