RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 PPP1R15AO75807 674 aaPredicted RBP26.22■■□□□ 1.79
ATG3-205ENST00000488910 BCANQ96GW7 911 aa26.21■■□□□ 1.79
ATG3-205ENST00000488910 SLC26A8Q96RN1 970 aa26.21■■□□□ 1.79
ATG3-205ENST00000488910 LRRC7Q96NW7 1537 aa26.2■■□□□ 1.79
ATG3-205ENST00000488910 SPHKAPQ2M3C7 1700 aa26.2■■□□□ 1.79
ATG3-205ENST00000488910 PLEKHG1Q9ULL1 1385 aa26.2■■□□□ 1.78
ATG3-205ENST00000488910 KCNA6P17658 529 aa26.18■■□□□ 1.78
ATG3-205ENST00000488910 SLC4A1APQ9BWU0 796 aaKnown RBP26.17■■□□□ 1.78
ATG3-205ENST00000488910 ACIN1Q9UKV3 1341 aaKnown RBP26.15■■□□□ 1.78
ATG3-205ENST00000488910 TBX22Q9Y458 520 aa26.14■■□□□ 1.78
ATG3-205ENST00000488910 TRPM2O94759 1503 aa26.13■■□□□ 1.77
ATG3-205ENST00000488910 NUTM2DQ5VT03 806 aaPredicted RBP26.11■■□□□ 1.77
ATG3-205ENST00000488910 PIP4K2BP78356 416 aa26.1■■□□□ 1.77
ATG3-205ENST00000488910 ZNF326Q5BKZ1 582 aaKnown RBP26.09■■□□□ 1.77
ATG3-205ENST00000488910 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
ATG3-205ENST00000488910 SCAF1Q9H7N4 1312 aaKnown RBP26.08■■□□□ 1.77
ATG3-205ENST00000488910 CLTCL1P53675 1640 aa26.07■■□□□ 1.76
ATG3-205ENST00000488910 PROSER2Q86WR7 435 aaPredicted RBP26.07■■□□□ 1.76
ATG3-205ENST00000488910 SETD5Q9C0A6 1442 aa26.05■■□□□ 1.76
ATG3-205ENST00000488910 NWD1Q149M9 1564 aa26.04■■□□□ 1.76
ATG3-205ENST00000488910 MPHOSPH9Q99550 1183 aa26.04■■□□□ 1.76
ATG3-205ENST00000488910 KIF1BO60333 1816 aa26.04■■□□□ 1.76
ATG3-205ENST00000488910 TMEM94Q12767 1356 aa26.04■■□□□ 1.76
ATG3-205ENST00000488910 ADAMTS13Q76LX8 1427 aa26.04■■□□□ 1.76
ATG3-205ENST00000488910 NKTRP30414 1462 aaKnown RBP26.04■■□□□ 1.76
ATG3-205ENST00000488910 DIP2AQ14689 1571 aa26.03■■□□□ 1.76
ATG3-205ENST00000488910 CHD2O14647 1828 aaKnown RBP26.03■■□□□ 1.76
ATG3-205ENST00000488910 XIRP1Q702N8 1843 aaKnown RBP26.03■■□□□ 1.76
ATG3-205ENST00000488910 PIK3R4Q99570 1358 aa26.03■■□□□ 1.76
ATG3-205ENST00000488910 ALKQ9UM73 1620 aa26.02■■□□□ 1.76
ATG3-205ENST00000488910 FOXD1Q16676 465 aa25.99■■□□□ 1.75
ATG3-205ENST00000488910 RPGRIP1LQ68CZ1 1315 aa25.97■■□□□ 1.75
ATG3-205ENST00000488910 HSPA1LP34931 641 aa25.97■■□□□ 1.75
ATG3-205ENST00000488910 VGFO15240 615 aaPredicted RBP25.96■■□□□ 1.75
ATG3-205ENST00000488910 NEXMIFQ5QGS0 1516 aa25.96■■□□□ 1.75
ATG3-205ENST00000488910 SETBP1Q9Y6X0 1596 aa25.95■■□□□ 1.75
ATG3-205ENST00000488910 RBM33Q96EV2 1170 aaKnown RBP25.95■■□□□ 1.74
ATG3-205ENST00000488910 NCOA3Q9Y6Q9 1424 aa25.94■■□□□ 1.74
ATG3-205ENST00000488910 RAB3GAP2Q9H2M9 1393 aa25.93■■□□□ 1.74
ATG3-205ENST00000488910 CCDC144AA2RUR9 1427 aa25.92■■□□□ 1.74
ATG3-205ENST00000488910 AMOTL2Q9Y2J4 779 aa25.92■■□□□ 1.74
ATG3-205ENST00000488910 MSH6P52701 1360 aa25.92■■□□□ 1.74
ATG3-205ENST00000488910 NRXN3Q9Y4C0 1643 aa25.91■■□□□ 1.74
ATG3-205ENST00000488910 HRCP23327 699 aa25.89■■□□□ 1.74
ATG3-205ENST00000488910 FAM135BQ49AJ0 1406 aa25.88■■□□□ 1.73
ATG3-205ENST00000488910 PTPRUQ92729 1446 aa25.88■■□□□ 1.73
ATG3-205ENST00000488910 METP08581 1390 aa25.85■■□□□ 1.73
ATG3-205ENST00000488910 DISP3Q9P2K9 1392 aa25.84■■□□□ 1.73
ATG3-205ENST00000488910 C14orf37Q86TY3 774 aa25.84■■□□□ 1.73
ATG3-205ENST00000488910 C19orf44Q9H6X5 657 aa25.84■■□□□ 1.73
ATG3-205ENST00000488910 SLAIN2Q9P270 581 aa25.84■■□□□ 1.73
ATG3-205ENST00000488910 SPATA31E1Q6ZUB1 1445 aa25.82■■□□□ 1.72
ATG3-205ENST00000488910 PPLO60437 1756 aa25.82■■□□□ 1.72
ATG3-205ENST00000488910 RGL3Q3MIN7 710 aa25.81■■□□□ 1.72
ATG3-205ENST00000488910 CADPS2Q86UW7 1296 aa25.8■■□□□ 1.72
ATG3-205ENST00000488910 XRN1Q8IZH2 1706 aaKnown RBP25.8■■□□□ 1.72
ATG3-205ENST00000488910 ANKRD30BQ9BXX2 1392 aa25.79■■□□□ 1.72
ATG3-205ENST00000488910 ATF3P18847 181 aa25.78■■□□□ 1.72
ATG3-205ENST00000488910 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.74■■□□□ 1.71
ATG3-205ENST00000488910 ROBO1Q9Y6N7 1651 aa25.74■■□□□ 1.71
ATG3-205ENST00000488910 ADGRF5Q8IZF2 1346 aa25.74■■□□□ 1.71
ATG3-205ENST00000488910 SETD1AO15047 1707 aaKnown RBP25.72■■□□□ 1.71
ATG3-205ENST00000488910 DCCP43146 1447 aa25.71■■□□□ 1.71
ATG3-205ENST00000488910 IFT172Q9UG01 1749 aa25.69■■□□□ 1.7
ATG3-205ENST00000488910 PTCH1Q13635 1447 aa25.68■■□□□ 1.7
ATG3-205ENST00000488910 PRAG1Q86YV5 1406 aa25.68■■□□□ 1.7
ATG3-205ENST00000488910 MED1Q15648 1581 aaPredicted RBP25.65■■□□□ 1.7
ATG3-205ENST00000488910 ADGRL3Q9HAR2 1447 aa25.65■■□□□ 1.7
ATG3-205ENST00000488910 ROBO2Q9HCK4 1378 aa25.64■■□□□ 1.69
ATG3-205ENST00000488910 PIK3C2GO75747 1445 aa25.63■■□□□ 1.69
ATG3-205ENST00000488910 ILDR2Q71H61 639 aa25.6■■□□□ 1.69
ATG3-205ENST00000488910 C14orf93Q9H972 538 aaKnown RBP25.6■■□□□ 1.69
ATG3-205ENST00000488910 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
ATG3-205ENST00000488910 BRINP3Q76B58 766 aa25.59■■□□□ 1.69
ATG3-205ENST00000488910 MYOM2P54296 1465 aa25.59■■□□□ 1.69
ATG3-205ENST00000488910 NRXN1Q9ULB1 1477 aa25.59■■□□□ 1.69
ATG3-205ENST00000488910 LRPPRCP42704 1394 aaKnown RBP25.58■■□□□ 1.69
ATG3-205ENST00000488910 MST1RQ04912 1400 aa25.58■■□□□ 1.69
ATG3-205ENST00000488910 STAC3Q96MF2 364 aa25.58■■□□□ 1.69
ATG3-205ENST00000488910 ABCC11Q96J66 1382 aa25.57■■□□□ 1.68
ATG3-205ENST00000488910 TMEM132EQ6IEE7 984 aa25.57■■□□□ 1.68
ATG3-205ENST00000488910 NALCNQ8IZF0 1738 aa25.57■■□□□ 1.68
ATG3-205ENST00000488910 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
ATG3-205ENST00000488910 STK26Q9P289 416 aa25.56■■□□□ 1.68
ATG3-205ENST00000488910 TECPR2O15040 1411 aa25.55■■□□□ 1.68
ATG3-205ENST00000488910 JCADQ9P266 1359 aa25.55■■□□□ 1.68
ATG3-205ENST00000488910 AHDC1Q5TGY3 1603 aaPredicted RBP25.54■■□□□ 1.68
ATG3-205ENST00000488910 CFAP70Q5T0N1 1121 aa25.53■■□□□ 1.68
ATG3-205ENST00000488910 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
ATG3-205ENST00000488910 YTHDC2Q9H6S0 1430 aaKnown RBP25.52■■□□□ 1.68
ATG3-205ENST00000488910 COL16A1Q07092 1604 aaPredicted RBP25.52■■□□□ 1.68
ATG3-205ENST00000488910 DCAF11Q8TEB1 546 aa25.51■■□□□ 1.67
ATG3-205ENST00000488910 DHX57Q6P158 1386 aaKnown RBP25.51■■□□□ 1.67
ATG3-205ENST00000488910 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
ATG3-205ENST00000488910 LAMC1P11047 1609 aa25.5■■□□□ 1.67
ATG3-205ENST00000488910 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
ATG3-205ENST00000488910 WAPLQ7Z5K2 1190 aa25.5■■□□□ 1.67
ATG3-205ENST00000488910 KDM2AQ9Y2K7 1162 aa25.49■■□□□ 1.67
ATG3-205ENST00000488910 KNDC1Q76NI1 1749 aa25.49■■□□□ 1.67
ATG3-205ENST00000488910 SPATA31A6Q5VVP1 1343 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms