RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.67
COL16A1-215ENST00000488897 LTKP29376 864 aa25.48■■□□□ 1.67
COL16A1-215ENST00000488897 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
COL16A1-215ENST00000488897 SPATA31E1Q6ZUB1 1445 aa25.48■■□□□ 1.67
COL16A1-215ENST00000488897 A2ML1A8K2U0 1454 aa25.47■■□□□ 1.67
COL16A1-215ENST00000488897 UHRF1BP1Q6BDS2 1440 aa25.46■■□□□ 1.67
COL16A1-215ENST00000488897 SETD1BQ9UPS6 1966 aaKnown RBP25.46■■□□□ 1.67
COL16A1-215ENST00000488897 TMEM131LA2VDJ0 1609 aa25.46■■□□□ 1.67
COL16A1-215ENST00000488897 ADGRF5Q8IZF2 1346 aa25.45■■□□□ 1.67
COL16A1-215ENST00000488897 KIF1BO60333 1816 aa25.45■■□□□ 1.66
COL16A1-215ENST00000488897 CEP170BQ9Y4F5 1589 aaPredicted RBP25.44■■□□□ 1.66
COL16A1-215ENST00000488897 NCKAP5LQ9HCH0 1330 aa25.43■■□□□ 1.66
COL16A1-215ENST00000488897 UBR1Q8IWV7 1749 aa25.43■■□□□ 1.66
COL16A1-215ENST00000488897 TXNDC2Q86VQ3 553 aa25.42■■□□□ 1.66
COL16A1-215ENST00000488897 BCANQ96GW7 911 aa25.42■■□□□ 1.66
COL16A1-215ENST00000488897 NLRP1Q9C000 1473 aa25.41■■□□□ 1.66
COL16A1-215ENST00000488897 NBPF8Q3BBV2 869 aa25.41■■□□□ 1.66
COL16A1-215ENST00000488897 THEMISQ8N1K5 641 aaPredicted RBP25.41■■□□□ 1.66
COL16A1-215ENST00000488897 LMTK3Q96Q04 1460 aa25.4■■□□□ 1.66
COL16A1-215ENST00000488897 ADGRB3O60242 1522 aa25.4■■□□□ 1.66
COL16A1-215ENST00000488897 TMEM2Q9UHN6 1383 aa25.37■■□□□ 1.65
COL16A1-215ENST00000488897 RIMS2Q9UQ26 1411 aa25.37■■□□□ 1.65
COL16A1-215ENST00000488897 SLC26A8Q96RN1 970 aa25.36■■□□□ 1.65
COL16A1-215ENST00000488897 TSHZ2Q9NRE2 1034 aa25.35■■□□□ 1.65
COL16A1-215ENST00000488897 FKBP8Q14318 412 aa25.33■■□□□ 1.65
COL16A1-215ENST00000488897 CFAP70Q5T0N1 1121 aa25.33■■□□□ 1.64
COL16A1-215ENST00000488897 NBPF1Q3BBV0 1214 aa25.32■■□□□ 1.64
COL16A1-215ENST00000488897 TMEM132EQ6IEE7 984 aa25.32■■□□□ 1.64
COL16A1-215ENST00000488897 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
COL16A1-215ENST00000488897 NEFLP07196 543 aa25.31■■□□□ 1.64
COL16A1-215ENST00000488897 ZFYVE9O95405 1425 aa25.3■■□□□ 1.64
COL16A1-215ENST00000488897 ANKLE2Q86XL3 938 aa25.29■■□□□ 1.64
COL16A1-215ENST00000488897 EID1Q9Y6B2 187 aa25.28■■□□□ 1.64
COL16A1-215ENST00000488897 ZNF142P52746 1687 aaPredicted RBP25.28■■□□□ 1.64
COL16A1-215ENST00000488897 VGFO15240 615 aaPredicted RBP25.26■■□□□ 1.63
COL16A1-215ENST00000488897 PPLO60437 1756 aa25.26■■□□□ 1.63
COL16A1-215ENST00000488897 RBM33Q96EV2 1170 aaKnown RBP25.23■■□□□ 1.63
COL16A1-215ENST00000488897 STK26Q9P289 416 aa25.23■■□□□ 1.63
COL16A1-215ENST00000488897 IFT172Q9UG01 1749 aa25.22■■□□□ 1.63
COL16A1-215ENST00000488897 RPGRIP1LQ68CZ1 1315 aa25.22■■□□□ 1.63
COL16A1-215ENST00000488897 ARHGAP23Q9P227 1491 aa25.21■■□□□ 1.63
COL16A1-215ENST00000488897 HSPA5P11021 654 aaKnown RBP25.21■■□□□ 1.63
COL16A1-215ENST00000488897 SLIT1O75093 1534 aa25.21■■□□□ 1.63
COL16A1-215ENST00000488897 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
COL16A1-215ENST00000488897 PRAG1Q86YV5 1406 aa25.2■■□□□ 1.62
COL16A1-215ENST00000488897 EIF4G2P78344 907 aaKnown RBP eCLIP25.2■■□□□ 1.62
COL16A1-215ENST00000488897 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
COL16A1-215ENST00000488897 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
COL16A1-215ENST00000488897 METP08581 1390 aa25.17■■□□□ 1.62
COL16A1-215ENST00000488897 STRCQ7RTU9 1775 aa25.16■■□□□ 1.62
COL16A1-215ENST00000488897 HDGFP51858 240 aaKnown RBP25.16■■□□□ 1.62
COL16A1-215ENST00000488897 PIK3C2GO75747 1445 aa25.15■■□□□ 1.62
COL16A1-215ENST00000488897 KDM5AP29375 1690 aaKnown RBP25.15■■□□□ 1.62
COL16A1-215ENST00000488897 NEURL4Q96JN8 1562 aa25.15■■□□□ 1.62
COL16A1-215ENST00000488897 IQGAP1P46940 1657 aa25.14■■□□□ 1.62
COL16A1-215ENST00000488897 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.61
COL16A1-215ENST00000488897 SAFB2Q14151 953 aaKnown RBP eCLIP25.13■■□□□ 1.61
COL16A1-215ENST00000488897 TRAK1Q9UPV9 953 aa25.13■■□□□ 1.61
COL16A1-215ENST00000488897 NPHP4O75161 1426 aaPredicted RBP25.13■■□□□ 1.61
COL16A1-215ENST00000488897 ADAMTS13Q76LX8 1427 aa25.13■■□□□ 1.61
COL16A1-215ENST00000488897 NRXN3Q9Y4C0 1643 aa25.12■■□□□ 1.61
COL16A1-215ENST00000488897 PLEKHG1Q9ULL1 1385 aa25.12■■□□□ 1.61
COL16A1-215ENST00000488897 MYOM2P54296 1465 aa25.11■■□□□ 1.61
COL16A1-215ENST00000488897 ROCK2O75116 1388 aaKnown RBP25.1■■□□□ 1.61
COL16A1-215ENST00000488897 CARD11Q9BXL7 1154 aa25.1■■□□□ 1.61
COL16A1-215ENST00000488897 ALKQ9UM73 1620 aa25.09■■□□□ 1.61
COL16A1-215ENST00000488897 NRXN1Q9ULB1 1477 aa25.09■■□□□ 1.61
COL16A1-215ENST00000488897 POLR1AO95602 1720 aaPredicted RBP25.07■■□□□ 1.6
COL16A1-215ENST00000488897 HNRNPUQ00839 825 aaKnown RBP eCLIP25.06■■□□□ 1.6
COL16A1-215ENST00000488897 WAPLQ7Z5K2 1190 aa25.06■■□□□ 1.6
COL16A1-215ENST00000488897 ZNF335Q9H4Z2 1342 aaPredicted RBP25.05■■□□□ 1.6
COL16A1-215ENST00000488897 ASXL1Q8IXJ9 1541 aa25.05■■□□□ 1.6
COL16A1-215ENST00000488897 PTPRUQ92729 1446 aa25.05■■□□□ 1.6
COL16A1-215ENST00000488897 AMOTL2Q9Y2J4 779 aa25.04■■□□□ 1.6
COL16A1-215ENST00000488897 TRPM1Q7Z4N2 1603 aa25.04■■□□□ 1.6
COL16A1-215ENST00000488897 KCNA6P17658 529 aa25.03■■□□□ 1.6
COL16A1-215ENST00000488897 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
COL16A1-215ENST00000488897 CCDC7Q96M83 1385 aa25.01■■□□□ 1.59
COL16A1-215ENST00000488897 MED14O60244 1454 aa25■■□□□ 1.59
COL16A1-215ENST00000488897 SETBP1Q9Y6X0 1596 aa25■■□□□ 1.59
COL16A1-215ENST00000488897 SETD1AO15047 1707 aaKnown RBP24.98■■□□□ 1.59
COL16A1-215ENST00000488897 PLEKHH1Q9ULM0 1364 aa24.98■■□□□ 1.59
COL16A1-215ENST00000488897 STAC3Q96MF2 364 aa24.98■■□□□ 1.59
COL16A1-215ENST00000488897 ADGRB1O14514 1584 aa24.98■■□□□ 1.59
COL16A1-215ENST00000488897 ST20-MTHFSA0A0A6YYL1 179 aa24.96■■□□□ 1.59
COL16A1-215ENST00000488897 RALGAPBQ86X10 1494 aa24.96■■□□□ 1.59
COL16A1-215ENST00000488897 PRAM1Q96QH2 718 aa24.96■■□□□ 1.59
COL16A1-215ENST00000488897 YTHDC2Q9H6S0 1430 aaKnown RBP24.95■■□□□ 1.58
COL16A1-215ENST00000488897 C11orf95C9JLR9 678 aaPredicted RBP24.94■■□□□ 1.58
COL16A1-215ENST00000488897 PRKRIP1Q9H875 184 aaPredicted RBP24.94■■□□□ 1.58
COL16A1-215ENST00000488897 ROBO2Q9HCK4 1378 aa24.94■■□□□ 1.58
COL16A1-215ENST00000488897 ANP32EQ9BTT0 268 aa24.92■■□□□ 1.58
COL16A1-215ENST00000488897 NUTM2FA1L443 756 aa24.92■■□□□ 1.58
COL16A1-215ENST00000488897 USP47Q96K76 1375 aa24.91■■□□□ 1.58
COL16A1-215ENST00000488897 STRCP1A6NGW2 1772 aa24.91■■□□□ 1.58
COL16A1-215ENST00000488897 MINK1Q8N4C8 1332 aaPredicted RBP24.91■■□□□ 1.58
COL16A1-215ENST00000488897 POGKQ9P215 609 aa24.9■■□□□ 1.58
COL16A1-215ENST00000488897 ERICH6BQ5W0A0 696 aa24.9■■□□□ 1.58
COL16A1-215ENST00000488897 RBM19Q9Y4C8 960 aaKnown RBP24.89■■□□□ 1.58
COL16A1-215ENST00000488897 PROSER2Q86WR7 435 aaPredicted RBP24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms