RNA–Protein interactions for RNA: ENST00000488857.5

VAMP2-204, Transcript of vesicle associated membrane protein 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene VAMP2, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP2-204ENST00000488857 SETD5Q9C0A6 1442 aa33.5■■■□□ 2.95
VAMP2-204ENST00000488857 CLTCL1P53675 1640 aa33.5■■■□□ 2.95
VAMP2-204ENST00000488857 CHGAP10645 457 aaKnown RBP33.49■■■□□ 2.95
VAMP2-204ENST00000488857 PLEKHG1Q9ULL1 1385 aa33.48■■■□□ 2.95
VAMP2-204ENST00000488857 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.47■■■□□ 2.95
VAMP2-204ENST00000488857 LRRC7Q96NW7 1537 aa33.42■■■□□ 2.94
VAMP2-204ENST00000488857 KIF1BO60333 1816 aa33.42■■■□□ 2.94
VAMP2-204ENST00000488857 PPP1R15AO75807 674 aaPredicted RBP33.41■■■□□ 2.94
VAMP2-204ENST00000488857 SLC26A8Q96RN1 970 aa33.39■■■□□ 2.94
VAMP2-204ENST00000488857 MPHOSPH9Q99550 1183 aa33.37■■■□□ 2.93
VAMP2-204ENST00000488857 RAB3GAP2Q9H2M9 1393 aa33.36■■■□□ 2.93
VAMP2-204ENST00000488857 NWD1Q149M9 1564 aa33.36■■■□□ 2.93
VAMP2-204ENST00000488857 DIP2AQ14689 1571 aa33.35■■■□□ 2.93
VAMP2-204ENST00000488857 UBAP1LF5GYI3 381 aa33.34■■■□□ 2.93
VAMP2-204ENST00000488857 KCNA6P17658 529 aa33.34■■■□□ 2.93
VAMP2-204ENST00000488857 BCANQ96GW7 911 aa33.33■■■□□ 2.93
VAMP2-204ENST00000488857 ADAMTS13Q76LX8 1427 aa33.33■■■□□ 2.93
VAMP2-204ENST00000488857 TBX22Q9Y458 520 aa33.32■■■□□ 2.92
VAMP2-204ENST00000488857 NEXMIFQ5QGS0 1516 aa33.32■■■□□ 2.92
VAMP2-204ENST00000488857 NUTM2DQ5VT03 806 aaPredicted RBP33.31■■■□□ 2.92
VAMP2-204ENST00000488857 CHD2O14647 1828 aaKnown RBP33.3■■■□□ 2.92
VAMP2-204ENST00000488857 XIRP1Q702N8 1843 aaKnown RBP33.3■■■□□ 2.92
VAMP2-204ENST00000488857 NKTRP30414 1462 aaKnown RBP33.3■■■□□ 2.92
VAMP2-204ENST00000488857 FOXD1Q16676 465 aa33.29■■■□□ 2.92
VAMP2-204ENST00000488857 ZNF326Q5BKZ1 582 aaKnown RBP33.29■■■□□ 2.92
VAMP2-204ENST00000488857 SETBP1Q9Y6X0 1596 aa33.28■■■□□ 2.92
VAMP2-204ENST00000488857 NRXN3Q9Y4C0 1643 aa33.26■■■□□ 2.91
VAMP2-204ENST00000488857 PIK3R4Q99570 1358 aa33.25■■■□□ 2.91
VAMP2-204ENST00000488857 ALKQ9UM73 1620 aa33.25■■■□□ 2.91
VAMP2-204ENST00000488857 TOM1O60784 492 aa33.25■■■□□ 2.91
VAMP2-204ENST00000488857 HRCP23327 699 aa33.25■■■□□ 2.91
VAMP2-204ENST00000488857 CCDC144AA2RUR9 1427 aa33.24■■■□□ 2.91
VAMP2-204ENST00000488857 SENP3Q9H4L4 574 aaPredicted RBP33.23■■■□□ 2.91
VAMP2-204ENST00000488857 RPGRIP1LQ68CZ1 1315 aa33.21■■■□□ 2.91
VAMP2-204ENST00000488857 TMEM94Q12767 1356 aa33.19■■■□□ 2.9
VAMP2-204ENST00000488857 PPLO60437 1756 aa33.17■■■□□ 2.9
VAMP2-204ENST00000488857 PROSER2Q86WR7 435 aaPredicted RBP33.16■■■□□ 2.9
VAMP2-204ENST00000488857 SPATA31E1Q6ZUB1 1445 aa33.16■■■□□ 2.9
VAMP2-204ENST00000488857 VGFO15240 615 aaPredicted RBP33.14■■■□□ 2.9
VAMP2-204ENST00000488857 PTPRUQ92729 1446 aa33.1■■■□□ 2.89
VAMP2-204ENST00000488857 NCOA3Q9Y6Q9 1424 aa33.1■■■□□ 2.89
VAMP2-204ENST00000488857 XRN1Q8IZH2 1706 aaKnown RBP33.09■■■□□ 2.89
VAMP2-204ENST00000488857 PIP4K2BP78356 416 aa33.09■■■□□ 2.89
VAMP2-204ENST00000488857 IFT172Q9UG01 1749 aa33.08■■■□□ 2.89
VAMP2-204ENST00000488857 SETD1AO15047 1707 aaKnown RBP33.06■■■□□ 2.88
VAMP2-204ENST00000488857 METP08581 1390 aa33.06■■■□□ 2.88
VAMP2-204ENST00000488857 SCAF1Q9H7N4 1312 aaKnown RBP33.04■■■□□ 2.88
VAMP2-204ENST00000488857 RBM33Q96EV2 1170 aaKnown RBP33.04■■■□□ 2.88
VAMP2-204ENST00000488857 AMOTL2Q9Y2J4 779 aa33.04■■■□□ 2.88
VAMP2-204ENST00000488857 ANKRD30BQ9BXX2 1392 aa33.03■■■□□ 2.88
VAMP2-204ENST00000488857 MSH6P52701 1360 aa33.01■■■□□ 2.88
VAMP2-204ENST00000488857 RGL3Q3MIN7 710 aa33■■■□□ 2.87
VAMP2-204ENST00000488857 HSPA1LP34931 641 aa32.96■■■□□ 2.87
VAMP2-204ENST00000488857 FAM135BQ49AJ0 1406 aa32.94■■■□□ 2.86
VAMP2-204ENST00000488857 ADGRF5Q8IZF2 1346 aa32.94■■■□□ 2.86
VAMP2-204ENST00000488857 PRAG1Q86YV5 1406 aa32.94■■■□□ 2.86
VAMP2-204ENST00000488857 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.91■■■□□ 2.86
VAMP2-204ENST00000488857 C19orf44Q9H6X5 657 aa32.9■■■□□ 2.86
VAMP2-204ENST00000488857 PIK3C2GO75747 1445 aa32.9■■■□□ 2.86
VAMP2-204ENST00000488857 MYOM2P54296 1465 aa32.89■■■□□ 2.86
VAMP2-204ENST00000488857 PTCH1Q13635 1447 aa32.89■■■□□ 2.86
VAMP2-204ENST00000488857 NRXN1Q9ULB1 1477 aa32.88■■■□□ 2.85
VAMP2-204ENST00000488857 C14orf37Q86TY3 774 aa32.87■■■□□ 2.85
VAMP2-204ENST00000488857 ROBO1Q9Y6N7 1651 aa32.87■■■□□ 2.85
VAMP2-204ENST00000488857 DCCP43146 1447 aa32.86■■■□□ 2.85
VAMP2-204ENST00000488857 SLAIN2Q9P270 581 aa32.85■■■□□ 2.85
VAMP2-204ENST00000488857 CADPS2Q86UW7 1296 aa32.83■■■□□ 2.85
VAMP2-204ENST00000488857 ADGRL3Q9HAR2 1447 aa32.81■■■□□ 2.84
VAMP2-204ENST00000488857 ATF3P18847 181 aa32.8■■■□□ 2.84
VAMP2-204ENST00000488857 ROBO2Q9HCK4 1378 aa32.8■■■□□ 2.84
VAMP2-204ENST00000488857 ASXL1Q8IXJ9 1541 aa32.79■■■□□ 2.84
VAMP2-204ENST00000488857 LAMC1P11047 1609 aa32.79■■■□□ 2.84
VAMP2-204ENST00000488857 NALCNQ8IZF0 1738 aa32.79■■■□□ 2.84
VAMP2-204ENST00000488857 TECPR2O15040 1411 aa32.77■■■□□ 2.84
VAMP2-204ENST00000488857 KNDC1Q76NI1 1749 aa32.74■■■□□ 2.83
VAMP2-204ENST00000488857 LRPPRCP42704 1394 aaKnown RBP32.74■■■□□ 2.83
VAMP2-204ENST00000488857 C14orf93Q9H972 538 aaKnown RBP32.74■■■□□ 2.83
VAMP2-204ENST00000488857 STAC3Q96MF2 364 aa32.73■■■□□ 2.83
VAMP2-204ENST00000488857 ABCC11Q96J66 1382 aa32.71■■■□□ 2.83
VAMP2-204ENST00000488857 MST1RQ04912 1400 aa32.69■■■□□ 2.82
VAMP2-204ENST00000488857 DHX57Q6P158 1386 aaKnown RBP32.68■■■□□ 2.82
VAMP2-204ENST00000488857 YTHDC2Q9H6S0 1430 aaKnown RBP32.68■■■□□ 2.82
VAMP2-204ENST00000488857 TMEM132EQ6IEE7 984 aa32.67■■■□□ 2.82
VAMP2-204ENST00000488857 TRIM26Q12899 539 aaPredicted RBP32.66■■■□□ 2.82
VAMP2-204ENST00000488857 DCAF11Q8TEB1 546 aa32.66■■■□□ 2.82
VAMP2-204ENST00000488857 DISP3Q9P2K9 1392 aa32.66■■■□□ 2.82
VAMP2-204ENST00000488857 PHLPP1O60346 1717 aa32.65■■■□□ 2.82
VAMP2-204ENST00000488857 CFAP70Q5T0N1 1121 aa32.65■■■□□ 2.82
VAMP2-204ENST00000488857 MED1Q15648 1581 aaPredicted RBP32.64■■■□□ 2.82
VAMP2-204ENST00000488857 AHDC1Q5TGY3 1603 aaPredicted RBP32.64■■■□□ 2.82
VAMP2-204ENST00000488857 STK26Q9P289 416 aa32.62■■■□□ 2.81
VAMP2-204ENST00000488857 BRINP3Q76B58 766 aa32.61■■■□□ 2.81
VAMP2-204ENST00000488857 SIRT1Q96EB6 747 aa32.61■■■□□ 2.81
VAMP2-204ENST00000488857 COL16A1Q07092 1604 aaPredicted RBP32.61■■■□□ 2.81
VAMP2-204ENST00000488857 ADGRB1O14514 1584 aa32.6■■■□□ 2.81
VAMP2-204ENST00000488857 CDC42BPGQ6DT37 1551 aa32.6■■■□□ 2.81
VAMP2-204ENST00000488857 KDM2AQ9Y2K7 1162 aa32.59■■■□□ 2.81
VAMP2-204ENST00000488857 C1orf167Q5SNV9 1468 aa32.55■■■□□ 2.8
VAMP2-204ENST00000488857 WAPLQ7Z5K2 1190 aa32.55■■■□□ 2.8
VAMP2-204ENST00000488857 DLC1Q96QB1 1528 aa32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms