RNA–Protein interactions for RNA: ENST00000488553.3

RN7SL561P-201, Transcript of RNA, 7SL, cytoplasmic 561, pseudogene, humanhuman

BASIC

Gene RN7SL561P, Length 281 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL561P-201ENST00000488553 CHGAP10645 457 aaKnown RBP9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 IDI1Q13907 227 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 C14orf93Q9H972 538 aaKnown RBP9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 MRS2Q9HD23 443 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 REREQ9P2R6 1566 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 CAMSAP1Q5T5Y3 1602 aa9.23□□□□□ -0.93
RN7SL561P-201ENST00000488553 KIAA1210Q9ULL0 1709 aa9.22□□□□□ -0.93
RN7SL561P-201ENST00000488553 RALBP1Q15311 655 aa9.22□□□□□ -0.93
RN7SL561P-201ENST00000488553 VGFO15240 615 aaPredicted RBP9.21□□□□□ -0.94
RN7SL561P-201ENST00000488553 CDCA8Q53HL2 280 aa9.21□□□□□ -0.94
RN7SL561P-201ENST00000488553 PANK3Q9H999 370 aa9.21□□□□□ -0.94
RN7SL561P-201ENST00000488553 KIF1BO60333 1816 aa9.21□□□□□ -0.94
RN7SL561P-201ENST00000488553 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 ZC3H13Q5T200 1668 aaKnown RBP9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 EIF3AQ14152 1382 aaKnown RBP9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 SYNMO15061 1565 aa9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 PIK3C2BO00750 1634 aa9.2□□□□□ -0.94
RN7SL561P-201ENST00000488553 SIGLEC1Q9BZZ2 1709 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 IFT172Q9UG01 1749 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 HNRNPUQ00839 825 aaKnown RBP eCLIP9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 FAM9BQ8IZU0 186 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 PNISRQ8TF01 805 aaKnown RBP9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 PIK3C2GO75747 1445 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 ZFYVE9O95405 1425 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 MROH2AA6NES4 1674 aa9.19□□□□□ -0.94
RN7SL561P-201ENST00000488553 TSPOAP1O95153 1857 aa9.18□□□□□ -0.94
RN7SL561P-201ENST00000488553 MYBBP1AQ9BQG0 1328 aaKnown RBP9.18□□□□□ -0.94
RN7SL561P-201ENST00000488553 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
RN7SL561P-201ENST00000488553 BRD4O60885 1362 aaPredicted RBP9.17□□□□□ -0.94
RN7SL561P-201ENST00000488553 PARD3Q8TEW0 1356 aa9.17□□□□□ -0.94
RN7SL561P-201ENST00000488553 TMC1Q8TDI8 760 aa9.17□□□□□ -0.94
RN7SL561P-201ENST00000488553 KIF13AQ9H1H9 1805 aa9.17□□□□□ -0.94
RN7SL561P-201ENST00000488553 SBNO2Q9Y2G9 1366 aa9.16□□□□□ -0.94
RN7SL561P-201ENST00000488553 CNGB1Q14028 1251 aaPredicted RBP9.16□□□□□ -0.94
RN7SL561P-201ENST00000488553 TMEM132EQ6IEE7 984 aa9.16□□□□□ -0.94
RN7SL561P-201ENST00000488553 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.94
RN7SL561P-201ENST00000488553 ERVK-7P63135 1459 aa9.15□□□□□ -0.94
RN7SL561P-201ENST00000488553 PPLO60437 1756 aa9.15□□□□□ -0.94
RN7SL561P-201ENST00000488553 CENPJQ9HC77 1338 aaPredicted RBP9.15□□□□□ -0.94
RN7SL561P-201ENST00000488553 TRAK1Q9UPV9 953 aa9.15□□□□□ -0.94
RN7SL561P-201ENST00000488553 ADGRB1O14514 1584 aa9.15□□□□□ -0.95
RN7SL561P-201ENST00000488553 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 ZBED9Q6R2W3 1325 aa9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 NUTM2DQ5VT03 806 aaPredicted RBP9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 NLRP13Q86W25 1043 aa9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 PUS7Q96PZ0 661 aaKnown RBP9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 KNSTRNQ9Y448 316 aa9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 SUPT16HQ9Y5B9 1047 aaKnown RBP9.14□□□□□ -0.95
RN7SL561P-201ENST00000488553 LRPPRCP42704 1394 aaKnown RBP9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 TMEM131LA2VDJ0 1609 aa9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 MLECQ14165 292 aa9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 AMER1Q5JTC6 1135 aaPredicted RBP9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 CC2D1BQ5T0F9 858 aaKnown RBP9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 ARHGEF40Q8TER5 1519 aa9.13□□□□□ -0.95
RN7SL561P-201ENST00000488553 ZMYM3Q14202 1370 aa9.12□□□□□ -0.95
RN7SL561P-201ENST00000488553 NPC1L1Q9UHC9 1359 aa9.12□□□□□ -0.95
RN7SL561P-201ENST00000488553 ILDR1Q86SU0 546 aaPredicted RBP9.12□□□□□ -0.95
RN7SL561P-201ENST00000488553 MYO3AQ8NEV4 1616 aa9.12□□□□□ -0.95
RN7SL561P-201ENST00000488553 SPATA31D1Q6ZQQ2 1576 aa9.12□□□□□ -0.95
RN7SL561P-201ENST00000488553 CFAP65Q6ZU64 1925 aaKnown RBP9.11□□□□□ -0.95
RN7SL561P-201ENST00000488553 CARD14Q9BXL6 1004 aa9.11□□□□□ -0.95
RN7SL561P-201ENST00000488553 ESF1Q9H501 851 aaKnown RBP9.11□□□□□ -0.95
RN7SL561P-201ENST00000488553 A2ML1A8K2U0 1454 aa9.1□□□□□ -0.95
RN7SL561P-201ENST00000488553 STAG3Q9UJ98 1225 aa9.1□□□□□ -0.95
RN7SL561P-201ENST00000488553 INSRP06213 1382 aa9.1□□□□□ -0.95
RN7SL561P-201ENST00000488553 CLTCQ00610 1675 aaKnown RBP9.1□□□□□ -0.95
RN7SL561P-201ENST00000488553 PPP2R1AP30153 589 aa9.09□□□□□ -0.95
RN7SL561P-201ENST00000488553 EVC2Q86UK5 1308 aa9.08□□□□□ -0.96
RN7SL561P-201ENST00000488553 FKBP8Q14318 412 aa9.08□□□□□ -0.96
RN7SL561P-201ENST00000488553 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.08□□□□□ -0.96
RN7SL561P-201ENST00000488553 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
RN7SL561P-201ENST00000488553 RIMS2Q9UQ26 1411 aa9.07□□□□□ -0.96
RN7SL561P-201ENST00000488553 SLC12A5Q9H2X9 1139 aa9.07□□□□□ -0.96
RN7SL561P-201ENST00000488553 STK26Q9P289 416 aa9.07□□□□□ -0.96
RN7SL561P-201ENST00000488553 KDM5AP29375 1690 aaKnown RBP9.07□□□□□ -0.96
RN7SL561P-201ENST00000488553 NEFLP07196 543 aa9.06□□□□□ -0.96
RN7SL561P-201ENST00000488553 HDGFP51858 240 aaKnown RBP9.06□□□□□ -0.96
RN7SL561P-201ENST00000488553 MYOM1P52179 1685 aa9.06□□□□□ -0.96
RN7SL561P-201ENST00000488553 SMG6Q86US8 1419 aaKnown RBP9.05□□□□□ -0.96
RN7SL561P-201ENST00000488553 YTHDC2Q9H6S0 1430 aaKnown RBP9.05□□□□□ -0.96
RN7SL561P-201ENST00000488553 ALKQ9UM73 1620 aa9.05□□□□□ -0.96
RN7SL561P-201ENST00000488553 TNRQ92752 1358 aa9.05□□□□□ -0.96
RN7SL561P-201ENST00000488553 PTPRMP28827 1452 aa9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 TRHP20396 242 aaPredicted RBP9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 SIRT1Q96EB6 747 aa9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 PRAM1Q96QH2 718 aa9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 POGKQ9P215 609 aa9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 QRICH2Q9H0J4 1663 aa9.04□□□□□ -0.96
RN7SL561P-201ENST00000488553 MYO5BQ9ULV0 1848 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 ABCC11Q96J66 1382 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 SENP3Q9H4L4 574 aaPredicted RBP9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 CABP2Q9NPB3 220 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 ADAMTS8Q9UP79 889 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 NUDCQ9Y266 331 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 TULP4Q9NRJ4 1543 aa9.03□□□□□ -0.96
RN7SL561P-201ENST00000488553 PDE3BQ13370 1112 aa9.02□□□□□ -0.97
RN7SL561P-201ENST00000488553 SAFB2Q14151 953 aaKnown RBP eCLIP9.02□□□□□ -0.97
RN7SL561P-201ENST00000488553 ERICH6BQ5W0A0 696 aa9.02□□□□□ -0.97
RN7SL561P-201ENST00000488553 BLMP54132 1417 aaPredicted RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms