RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 ZFYVE9O95405 1425 aa35.56■■■■□ 3.28
RNF38-208ENST00000488058 HDGFP51858 240 aaKnown RBP35.54■■■■□ 3.28
RNF38-208ENST00000488058 SLC26A8Q96RN1 970 aa35.54■■■■□ 3.28
RNF38-208ENST00000488058 SLC4A1APQ9BWU0 796 aaKnown RBP35.52■■■■□ 3.28
RNF38-208ENST00000488058 NUTM2DQ5VT03 806 aaPredicted RBP35.51■■■■□ 3.28
RNF38-208ENST00000488058 LRRC7Q96NW7 1537 aa35.49■■■■□ 3.27
RNF38-208ENST00000488058 CLTCL1P53675 1640 aa35.48■■■■□ 3.27
RNF38-208ENST00000488058 ABCF1Q8NE71 845 aaKnown RBP eCLIP35.48■■■■□ 3.27
RNF38-208ENST00000488058 PLEKHG1Q9ULL1 1385 aa35.48■■■■□ 3.27
RNF38-208ENST00000488058 TRPM2O94759 1503 aa35.47■■■■□ 3.27
RNF38-208ENST00000488058 SCAF1Q9H7N4 1312 aaKnown RBP35.43■■■■□ 3.26
RNF38-208ENST00000488058 ZNF326Q5BKZ1 582 aaKnown RBP35.43■■■■□ 3.26
RNF38-208ENST00000488058 TOM1O60784 492 aa35.41■■■■□ 3.26
RNF38-208ENST00000488058 KIF1BO60333 1816 aa35.4■■■■□ 3.26
RNF38-208ENST00000488058 PIP4K2BP78356 416 aa35.39■■■■□ 3.26
RNF38-208ENST00000488058 KCNA6P17658 529 aa35.38■■■■□ 3.25
RNF38-208ENST00000488058 SETD5Q9C0A6 1442 aa35.38■■■■□ 3.25
RNF38-208ENST00000488058 FOXD1Q16676 465 aa35.36■■■■□ 3.25
RNF38-208ENST00000488058 XIRP1Q702N8 1843 aaKnown RBP35.34■■■■□ 3.25
RNF38-208ENST00000488058 MPHOSPH9Q99550 1183 aa35.32■■■■□ 3.24
RNF38-208ENST00000488058 NWD1Q149M9 1564 aa35.32■■■■□ 3.24
RNF38-208ENST00000488058 PROSER2Q86WR7 435 aaPredicted RBP35.3■■■■□ 3.24
RNF38-208ENST00000488058 ADAMTS13Q76LX8 1427 aa35.3■■■■□ 3.24
RNF38-208ENST00000488058 TBX22Q9Y458 520 aa35.29■■■■□ 3.24
RNF38-208ENST00000488058 CHD2O14647 1828 aaKnown RBP35.29■■■■□ 3.24
RNF38-208ENST00000488058 DIP2AQ14689 1571 aa35.29■■■■□ 3.24
RNF38-208ENST00000488058 ALKQ9UM73 1620 aa35.28■■■■□ 3.24
RNF38-208ENST00000488058 TMEM94Q12767 1356 aa35.27■■■■□ 3.24
RNF38-208ENST00000488058 RBM33Q96EV2 1170 aaKnown RBP35.27■■■■□ 3.24
RNF38-208ENST00000488058 NKTRP30414 1462 aaKnown RBP35.27■■■■□ 3.24
RNF38-208ENST00000488058 RAB3GAP2Q9H2M9 1393 aa35.26■■■■□ 3.24
RNF38-208ENST00000488058 NEXMIFQ5QGS0 1516 aa35.26■■■■□ 3.23
RNF38-208ENST00000488058 ACIN1Q9UKV3 1341 aaKnown RBP35.23■■■■□ 3.23
RNF38-208ENST00000488058 NRXN3Q9Y4C0 1643 aa35.21■■■■□ 3.23
RNF38-208ENST00000488058 CCDC144AA2RUR9 1427 aa35.19■■■■□ 3.22
RNF38-208ENST00000488058 SETBP1Q9Y6X0 1596 aa35.19■■■■□ 3.22
RNF38-208ENST00000488058 PIK3R4Q99570 1358 aa35.16■■■■□ 3.22
RNF38-208ENST00000488058 HSPA1LP34931 641 aa35.15■■■■□ 3.22
RNF38-208ENST00000488058 PPLO60437 1756 aa35.11■■■■□ 3.21
RNF38-208ENST00000488058 PTPRUQ92729 1446 aa35.1■■■■□ 3.21
RNF38-208ENST00000488058 AMOTL2Q9Y2J4 779 aa35.1■■■■□ 3.21
RNF38-208ENST00000488058 MSH6P52701 1360 aa35.1■■■■□ 3.21
RNF38-208ENST00000488058 RPGRIP1LQ68CZ1 1315 aa35.09■■■■□ 3.21
RNF38-208ENST00000488058 VGFO15240 615 aaPredicted RBP35.09■■■■□ 3.21
RNF38-208ENST00000488058 C14orf37Q86TY3 774 aa35.08■■■■□ 3.21
RNF38-208ENST00000488058 RGL3Q3MIN7 710 aa35.07■■■■□ 3.2
RNF38-208ENST00000488058 METP08581 1390 aa35.05■■■■□ 3.2
RNF38-208ENST00000488058 XRN1Q8IZH2 1706 aaKnown RBP35.03■■■■□ 3.2
RNF38-208ENST00000488058 SPATA31E1Q6ZUB1 1445 aa35■■■■□ 3.19
RNF38-208ENST00000488058 DISP3Q9P2K9 1392 aa34.99■■■■□ 3.19
RNF38-208ENST00000488058 NCOA3Q9Y6Q9 1424 aa34.98■■■■□ 3.19
RNF38-208ENST00000488058 SETD1AO15047 1707 aaKnown RBP34.96■■■■□ 3.19
RNF38-208ENST00000488058 IFT172Q9UG01 1749 aa34.96■■■■□ 3.19
RNF38-208ENST00000488058 ROBO1Q9Y6N7 1651 aa34.95■■■■□ 3.19
RNF38-208ENST00000488058 FAM135BQ49AJ0 1406 aa34.94■■■■□ 3.18
RNF38-208ENST00000488058 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.94■■■■□ 3.18
RNF38-208ENST00000488058 HRCP23327 699 aa34.93■■■■□ 3.18
RNF38-208ENST00000488058 ADGRF5Q8IZF2 1346 aa34.92■■■■□ 3.18
RNF38-208ENST00000488058 ANKRD30BQ9BXX2 1392 aa34.91■■■■□ 3.18
RNF38-208ENST00000488058 SLAIN2Q9P270 581 aa34.91■■■■□ 3.18
RNF38-208ENST00000488058 C19orf44Q9H6X5 657 aa34.9■■■■□ 3.18
RNF38-208ENST00000488058 ATF3P18847 181 aa34.88■■■■□ 3.17
RNF38-208ENST00000488058 CADPS2Q86UW7 1296 aa34.86■■■■□ 3.17
RNF38-208ENST00000488058 MED1Q15648 1581 aaPredicted RBP34.79■■■■□ 3.16
RNF38-208ENST00000488058 NALCNQ8IZF0 1738 aa34.79■■■■□ 3.16
RNF38-208ENST00000488058 PTCH1Q13635 1447 aa34.78■■■■□ 3.16
RNF38-208ENST00000488058 ROBO2Q9HCK4 1378 aa34.77■■■■□ 3.16
RNF38-208ENST00000488058 PIK3C2GO75747 1445 aa34.77■■■■□ 3.16
RNF38-208ENST00000488058 DCCP43146 1447 aa34.77■■■■□ 3.16
RNF38-208ENST00000488058 ADGRL3Q9HAR2 1447 aa34.77■■■■□ 3.16
RNF38-208ENST00000488058 PHLPP1O60346 1717 aa34.76■■■■□ 3.16
RNF38-208ENST00000488058 MYOM2P54296 1465 aa34.73■■■■□ 3.15
RNF38-208ENST00000488058 STK26Q9P289 416 aa34.73■■■■□ 3.15
RNF38-208ENST00000488058 TMEM132EQ6IEE7 984 aa34.71■■■■□ 3.15
RNF38-208ENST00000488058 ASXL1Q8IXJ9 1541 aa34.71■■■■□ 3.15
RNF38-208ENST00000488058 PRAG1Q86YV5 1406 aa34.7■■■■□ 3.15
RNF38-208ENST00000488058 MST1RQ04912 1400 aa34.68■■■■□ 3.14
RNF38-208ENST00000488058 NRXN1Q9ULB1 1477 aa34.67■■■■□ 3.14
RNF38-208ENST00000488058 LAMC1P11047 1609 aa34.66■■■■□ 3.14
RNF38-208ENST00000488058 LRPPRCP42704 1394 aaKnown RBP34.65■■■■□ 3.14
RNF38-208ENST00000488058 KDM2AQ9Y2K7 1162 aa34.65■■■■□ 3.14
RNF38-208ENST00000488058 CFAP70Q5T0N1 1121 aa34.64■■■■□ 3.14
RNF38-208ENST00000488058 BRINP3Q76B58 766 aa34.64■■■■□ 3.14
RNF38-208ENST00000488058 C14orf93Q9H972 538 aaKnown RBP34.64■■■■□ 3.14
RNF38-208ENST00000488058 DCAF11Q8TEB1 546 aa34.63■■■■□ 3.13
RNF38-208ENST00000488058 KNDC1Q76NI1 1749 aa34.63■■■■□ 3.13
RNF38-208ENST00000488058 ILDR2Q71H61 639 aa34.62■■■■□ 3.13
RNF38-208ENST00000488058 PHF23Q9BUL5 403 aaPredicted RBP34.62■■■■□ 3.13
RNF38-208ENST00000488058 COL16A1Q07092 1604 aaPredicted RBP34.62■■■■□ 3.13
RNF38-208ENST00000488058 YTHDC2Q9H6S0 1430 aaKnown RBP34.61■■■■□ 3.13
RNF38-208ENST00000488058 AHDC1Q5TGY3 1603 aaPredicted RBP34.6■■■■□ 3.13
RNF38-208ENST00000488058 TECPR2O15040 1411 aa34.6■■■■□ 3.13
RNF38-208ENST00000488058 WAPLQ7Z5K2 1190 aa34.59■■■■□ 3.13
RNF38-208ENST00000488058 ABCC11Q96J66 1382 aa34.59■■■■□ 3.13
RNF38-208ENST00000488058 DHX57Q6P158 1386 aaKnown RBP34.56■■■■□ 3.12
RNF38-208ENST00000488058 C1orf167Q5SNV9 1468 aa34.54■■■■□ 3.12
RNF38-208ENST00000488058 JCADQ9P266 1359 aa34.54■■■■□ 3.12
RNF38-208ENST00000488058 PLEKHH1Q9ULM0 1364 aa34.53■■■■□ 3.12
RNF38-208ENST00000488058 CDC42BPGQ6DT37 1551 aa34.51■■■■□ 3.12
RNF38-208ENST00000488058 NHSL1Q5SYE7 1610 aa34.51■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms