RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SYNMO15061 1565 aa15.79■□□□□ 0.12
HDLBP-242ENST00000488013 DCAF11Q8TEB1 546 aa15.79■□□□□ 0.12
HDLBP-242ENST00000488013 PIK3C2BO00750 1634 aa15.77■□□□□ 0.12
HDLBP-242ENST00000488013 RIMS1Q86UR5 1692 aaKnown RBP15.76■□□□□ 0.11
HDLBP-242ENST00000488013 CLTCL1P53675 1640 aa15.76■□□□□ 0.11
HDLBP-242ENST00000488013 ADGRB3O60242 1522 aa15.76■□□□□ 0.11
HDLBP-242ENST00000488013 A2ML1A8K2U0 1454 aa15.76■□□□□ 0.11
HDLBP-242ENST00000488013 C3P01024 1663 aa15.76■□□□□ 0.11
HDLBP-242ENST00000488013 UHRF1BP1Q6BDS2 1440 aa15.76■□□□□ 0.11
HDLBP-242ENST00000488013 EID1Q9Y6B2 187 aa15.75■□□□□ 0.11
HDLBP-242ENST00000488013 ZFYVE9O95405 1425 aa15.75■□□□□ 0.11
HDLBP-242ENST00000488013 UGGT1Q9NYU2 1555 aa15.75■□□□□ 0.11
HDLBP-242ENST00000488013 TMEM2Q9UHN6 1383 aa15.74■□□□□ 0.11
HDLBP-242ENST00000488013 KDM2AQ9Y2K7 1162 aa15.73■□□□□ 0.11
HDLBP-242ENST00000488013 MYOM2P54296 1465 aa15.71■□□□□ 0.11
HDLBP-242ENST00000488013 KDM5AP29375 1690 aaKnown RBP15.7■□□□□ 0.1
HDLBP-242ENST00000488013 SETD1BQ9UPS6 1966 aaKnown RBP15.69■□□□□ 0.1
HDLBP-242ENST00000488013 RIMS2Q9UQ26 1411 aa15.69■□□□□ 0.1
HDLBP-242ENST00000488013 TMEM131LA2VDJ0 1609 aa15.69■□□□□ 0.1
HDLBP-242ENST00000488013 ANKLE2Q86XL3 938 aa15.69■□□□□ 0.1
HDLBP-242ENST00000488013 DCAF8L1A6NGE4 600 aa15.68■□□□□ 0.1
HDLBP-242ENST00000488013 TXNDC2Q86VQ3 553 aa15.68■□□□□ 0.1
HDLBP-242ENST00000488013 PRAG1Q86YV5 1406 aa15.68■□□□□ 0.1
HDLBP-242ENST00000488013 CEP170BQ9Y4F5 1589 aaPredicted RBP15.67■□□□□ 0.1
HDLBP-242ENST00000488013 KIF1BO60333 1816 aa15.66■□□□□ 0.1
HDLBP-242ENST00000488013 SLIT1O75093 1534 aa15.66■□□□□ 0.1
HDLBP-242ENST00000488013 ADGRF5Q8IZF2 1346 aa15.66■□□□□ 0.1
HDLBP-242ENST00000488013 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
HDLBP-242ENST00000488013 NRXN1Q9ULB1 1477 aa15.65■□□□□ 0.1
HDLBP-242ENST00000488013 C14orf93Q9H972 538 aaKnown RBP15.65■□□□□ 0.1
HDLBP-242ENST00000488013 MYO3AQ8NEV4 1616 aa15.65■□□□□ 0.1
HDLBP-242ENST00000488013 NBPF8Q3BBV2 869 aa15.64■□□□□ 0.09
HDLBP-242ENST00000488013 NEXMIFQ5QGS0 1516 aa15.63■□□□□ 0.09
HDLBP-242ENST00000488013 PLEKHG1Q9ULL1 1385 aa15.63■□□□□ 0.09
HDLBP-242ENST00000488013 CFAP65Q6ZU64 1925 aaKnown RBP15.63■□□□□ 0.09
HDLBP-242ENST00000488013 PIK3C2GO75747 1445 aa15.63■□□□□ 0.09
HDLBP-242ENST00000488013 BCANQ96GW7 911 aa15.62■□□□□ 0.09
HDLBP-242ENST00000488013 ROCK2O75116 1388 aaKnown RBP15.62■□□□□ 0.09
HDLBP-242ENST00000488013 SCAF11Q99590 1463 aaKnown RBP15.61■□□□□ 0.09
HDLBP-242ENST00000488013 LTKP29376 864 aa15.61■□□□□ 0.09
HDLBP-242ENST00000488013 CARD11Q9BXL7 1154 aa15.61■□□□□ 0.09
HDLBP-242ENST00000488013 GPRASP1Q5JY77 1395 aa15.61■□□□□ 0.09
HDLBP-242ENST00000488013 RALGAPBQ86X10 1494 aa15.6■□□□□ 0.09
HDLBP-242ENST00000488013 SLC24A1O60721 1099 aa15.6■□□□□ 0.09
HDLBP-242ENST00000488013 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
HDLBP-242ENST00000488013 ZNF142P52746 1687 aaPredicted RBP15.6■□□□□ 0.09
HDLBP-242ENST00000488013 UBR1Q8IWV7 1749 aa15.6■□□□□ 0.09
HDLBP-242ENST00000488013 CFAP70Q5T0N1 1121 aa15.59■□□□□ 0.09
HDLBP-242ENST00000488013 TBX22Q9Y458 520 aa15.59■□□□□ 0.09
HDLBP-242ENST00000488013 EIF4G2P78344 907 aaKnown RBP eCLIP15.58■□□□□ 0.08
HDLBP-242ENST00000488013 LMTK3Q96Q04 1460 aa15.55■□□□□ 0.08
HDLBP-242ENST00000488013 EIF3AQ14152 1382 aaKnown RBP15.55■□□□□ 0.08
HDLBP-242ENST00000488013 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
HDLBP-242ENST00000488013 MED14O60244 1454 aa15.54■□□□□ 0.08
HDLBP-242ENST00000488013 NBPF1Q3BBV0 1214 aa15.54■□□□□ 0.08
HDLBP-242ENST00000488013 SETBP1Q9Y6X0 1596 aa15.53■□□□□ 0.08
HDLBP-242ENST00000488013 NPHP4O75161 1426 aaPredicted RBP15.53■□□□□ 0.08
HDLBP-242ENST00000488013 PPLO60437 1756 aa15.53■□□□□ 0.08
HDLBP-242ENST00000488013 SIRT1Q96EB6 747 aa15.52■□□□□ 0.08
HDLBP-242ENST00000488013 IFT172Q9UG01 1749 aa15.51■□□□□ 0.07
HDLBP-242ENST00000488013 HSPA2P54652 639 aa15.51■□□□□ 0.07
HDLBP-242ENST00000488013 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
HDLBP-242ENST00000488013 LAMC1P11047 1609 aa15.5■□□□□ 0.07
HDLBP-242ENST00000488013 LRPPRCP42704 1394 aaKnown RBP15.5■□□□□ 0.07
HDLBP-242ENST00000488013 ABCC11Q96J66 1382 aa15.5■□□□□ 0.07
HDLBP-242ENST00000488013 USP47Q96K76 1375 aa15.5■□□□□ 0.07
HDLBP-242ENST00000488013 NCKAP5LQ9HCH0 1330 aa15.5■□□□□ 0.07
HDLBP-242ENST00000488013 KIAA1210Q9ULL0 1709 aa15.5■□□□□ 0.07
HDLBP-242ENST00000488013 DIP2AQ14689 1571 aa15.49■□□□□ 0.07
HDLBP-242ENST00000488013 TMEM132EQ6IEE7 984 aa15.49■□□□□ 0.07
HDLBP-242ENST00000488013 SLC26A8Q96RN1 970 aa15.49■□□□□ 0.07
HDLBP-242ENST00000488013 ALKQ9UM73 1620 aa15.48■□□□□ 0.07
HDLBP-242ENST00000488013 YTHDC2Q9H6S0 1430 aaKnown RBP15.47■□□□□ 0.07
HDLBP-242ENST00000488013 METP08581 1390 aa15.47■□□□□ 0.07
HDLBP-242ENST00000488013 TRPM1Q7Z4N2 1603 aa15.46■□□□□ 0.07
HDLBP-242ENST00000488013 ADGRB1O14514 1584 aa15.46■□□□□ 0.07
HDLBP-242ENST00000488013 HSPA5P11021 654 aaKnown RBP15.46■□□□□ 0.07
HDLBP-242ENST00000488013 CDCA8Q53HL2 280 aa15.45■□□□□ 0.06
HDLBP-242ENST00000488013 TRAK1Q9UPV9 953 aa15.45■□□□□ 0.06
HDLBP-242ENST00000488013 MYO5BQ9ULV0 1848 aa15.45■□□□□ 0.06
HDLBP-242ENST00000488013 CENPJQ9HC77 1338 aaPredicted RBP15.44■□□□□ 0.06
HDLBP-242ENST00000488013 TECPR2O15040 1411 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 ST20-MTHFSA0A0A6YYL1 179 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 ZNF316A6NFI3 1004 aaPredicted RBP15.44■□□□□ 0.06
HDLBP-242ENST00000488013 KCNA6P17658 529 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 POGKQ9P215 609 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 STK26Q9P289 416 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 AMOTL2Q9Y2J4 779 aa15.44■□□□□ 0.06
HDLBP-242ENST00000488013 FAM135BQ49AJ0 1406 aa15.43■□□□□ 0.06
HDLBP-242ENST00000488013 SBNO2Q9Y2G9 1366 aa15.43■□□□□ 0.06
HDLBP-242ENST00000488013 TMF1P82094 1093 aa15.41■□□□□ 0.06
HDLBP-242ENST00000488013 DLC1Q96QB1 1528 aa15.41■□□□□ 0.06
HDLBP-242ENST00000488013 PUS7Q96PZ0 661 aaKnown RBP15.4■□□□□ 0.06
HDLBP-242ENST00000488013 PRAM1Q96QH2 718 aa15.4■□□□□ 0.06
HDLBP-242ENST00000488013 PTCH1Q13635 1447 aa15.4■□□□□ 0.06
HDLBP-242ENST00000488013 NRXN3Q9Y4C0 1643 aa15.39■□□□□ 0.05
HDLBP-242ENST00000488013 TESK2Q96S53 571 aa15.38■□□□□ 0.05
HDLBP-242ENST00000488013 IQGAP1P46940 1657 aa15.38■□□□□ 0.05
HDLBP-242ENST00000488013 ASXL1Q8IXJ9 1541 aa15.38■□□□□ 0.05
HDLBP-242ENST00000488013 EVC2Q86UK5 1308 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms