RNA–Protein interactions for RNA: ENST00000486715.5

GFM1-210, Transcript of G elongation factor mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM1, Length 3,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-210ENST00000486715 NASPP49321 788 aaPredicted RBP12.81□□□□□ -0.36
GFM1-210ENST00000486715 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
GFM1-210ENST00000486715 DDX11L8A8MPP1 907 aa12.8□□□□□ -0.36
GFM1-210ENST00000486715 MAPK8IP2Q13387 824 aaPredicted RBP12.8□□□□□ -0.36
GFM1-210ENST00000486715 DDX49Q9Y6V7 483 aaKnown RBP12.8□□□□□ -0.36
GFM1-210ENST00000486715 CFDP1Q9UEE9 299 aaPredicted RBP12.8□□□□□ -0.36
GFM1-210ENST00000486715 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
GFM1-210ENST00000486715 UQCRHLA0A096LP55 91 aa12.79□□□□□ -0.36
GFM1-210ENST00000486715 UQCRHP07919 91 aa12.79□□□□□ -0.36
GFM1-210ENST00000486715 TBC1D32Q96NH3 1257 aa12.79□□□□□ -0.36
GFM1-210ENST00000486715 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
GFM1-210ENST00000486715 FOXD4L5Q5VV16 416 aaPredicted RBP12.79□□□□□ -0.36
GFM1-210ENST00000486715 FOXD4L4Q8WXT5 416 aaPredicted RBP12.79□□□□□ -0.36
GFM1-210ENST00000486715 ABCC10Q5T3U5 1492 aa12.78□□□□□ -0.36
GFM1-210ENST00000486715 NUP155O75694 1391 aa12.78□□□□□ -0.36
GFM1-210ENST00000486715 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
GFM1-210ENST00000486715 TEX14Q8IWB6 1497 aa12.78□□□□□ -0.36
GFM1-210ENST00000486715 PTMAP06454 111 aaKnown RBP12.78□□□□□ -0.36
GFM1-210ENST00000486715 PRG4Q92954 1404 aaPredicted RBP12.78□□□□□ -0.36
GFM1-210ENST00000486715 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.36
GFM1-210ENST00000486715 TNPO1Q92973 898 aaKnown RBP12.77□□□□□ -0.37
GFM1-210ENST00000486715 GBP4Q96PP9 640 aa12.77□□□□□ -0.37
GFM1-210ENST00000486715 PCDHB15Q9Y5E8 787 aa12.77□□□□□ -0.37
GFM1-210ENST00000486715 BCORL1Q5H9F3 1711 aa12.77□□□□□ -0.37
GFM1-210ENST00000486715 SLFN5Q08AF3 891 aa12.76□□□□□ -0.37
GFM1-210ENST00000486715 AAMPQ13685 434 aa12.76□□□□□ -0.37
GFM1-210ENST00000486715 IQGAP2Q13576 1575 aa12.76□□□□□ -0.37
GFM1-210ENST00000486715 FBLN2P98095 1184 aa12.76□□□□□ -0.37
GFM1-210ENST00000486715 FTSJ3Q8IY81 847 aaKnown RBP12.76□□□□□ -0.37
GFM1-210ENST00000486715 CFAP43Q8NDM7 1665 aa12.76□□□□□ -0.37
GFM1-210ENST00000486715 FAM177BA6PVY3 158 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 IGSF3O75054 1194 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 TSC1Q92574 1164 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 GOLGA6L22H0YM25 854 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 PPP2R1AP30153 589 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.75□□□□□ -0.37
GFM1-210ENST00000486715 CGNL1Q0VF96 1302 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
GFM1-210ENST00000486715 RNF214Q8ND24 703 aa12.75□□□□□ -0.37
GFM1-210ENST00000486715 RIPK4P57078 832 aa12.74□□□□□ -0.37
GFM1-210ENST00000486715 TMF1P82094 1093 aa12.74□□□□□ -0.37
GFM1-210ENST00000486715 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
GFM1-210ENST00000486715 PER1O15534 1290 aaPredicted RBP12.74□□□□□ -0.37
GFM1-210ENST00000486715 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
GFM1-210ENST00000486715 JARID2Q92833 1246 aaPredicted RBP12.74□□□□□ -0.37
GFM1-210ENST00000486715 PPRC1Q5VV67 1664 aaKnown RBP12.73□□□□□ -0.37
GFM1-210ENST00000486715 CBX1P83916 185 aa12.73□□□□□ -0.37
GFM1-210ENST00000486715 PMFBP1Q8TBY8 1022 aa12.73□□□□□ -0.37
GFM1-210ENST00000486715 RWDD1Q9H446 243 aaPredicted RBP12.73□□□□□ -0.37
GFM1-210ENST00000486715 FOXD4L6Q3SYB3 417 aaPredicted RBP12.73□□□□□ -0.37
GFM1-210ENST00000486715 FOXD4L3Q6VB84 417 aaPredicted RBP12.73□□□□□ -0.37
GFM1-210ENST00000486715 PLCB2Q00722 1185 aa12.72□□□□□ -0.37
GFM1-210ENST00000486715 PRDM4Q9UKN5 801 aa12.72□□□□□ -0.37
GFM1-210ENST00000486715 RLBP1P12271 317 aa12.72□□□□□ -0.37
GFM1-210ENST00000486715 MCTP1Q6DN14 999 aa12.72□□□□□ -0.37
GFM1-210ENST00000486715 PARD3Q8TEW0 1356 aa12.71□□□□□ -0.37
GFM1-210ENST00000486715 SSFA2P28290 1259 aa12.71□□□□□ -0.37
GFM1-210ENST00000486715 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
GFM1-210ENST00000486715 MAP3K4Q9Y6R4 1608 aa12.71□□□□□ -0.38
GFM1-210ENST00000486715 CCDC173Q0VFZ6 552 aa12.71□□□□□ -0.38
GFM1-210ENST00000486715 ITPRIPQ8IWB1 547 aa12.7□□□□□ -0.38
GFM1-210ENST00000486715 RBM42Q9BTD8 480 aaKnown RBP12.7□□□□□ -0.38
GFM1-210ENST00000486715 LNPKQ9C0E8 428 aa12.7□□□□□ -0.38
GFM1-210ENST00000486715 PDE4CQ08493 712 aa12.7□□□□□ -0.38
GFM1-210ENST00000486715 E9PSI1 815 aa12.69□□□□□ -0.38
GFM1-210ENST00000486715 OFD1O75665 1012 aa12.69□□□□□ -0.38
GFM1-210ENST00000486715 JPH4Q96JJ6 628 aa12.69□□□□□ -0.38
GFM1-210ENST00000486715 SENP3Q9H4L4 574 aaPredicted RBP12.69□□□□□ -0.38
GFM1-210ENST00000486715 DISP1Q96F81 1524 aa12.69□□□□□ -0.38
GFM1-210ENST00000486715 KIAA0556O60303 1618 aa12.69□□□□□ -0.38
GFM1-210ENST00000486715 ABCC2Q92887 1545 aa12.68□□□□□ -0.38
GFM1-210ENST00000486715 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
GFM1-210ENST00000486715 FGD1P98174 961 aa12.68□□□□□ -0.38
GFM1-210ENST00000486715 TSPY4P0CV99 314 aa12.67□□□□□ -0.38
GFM1-210ENST00000486715 TSPY10P0CW01 314 aa12.67□□□□□ -0.38
GFM1-210ENST00000486715 RBM27Q9P2N5 1060 aaKnown RBP12.67□□□□□ -0.38
GFM1-210ENST00000486715 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
GFM1-210ENST00000486715 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
GFM1-210ENST00000486715 CDK13Q14004 1512 aaKnown RBP12.66□□□□□ -0.38
GFM1-210ENST00000486715 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
GFM1-210ENST00000486715 EFCAB5A4FU69 1503 aa12.66□□□□□ -0.38
GFM1-210ENST00000486715 SUPT6HQ7KZ85 1726 aaKnown RBP12.65□□□□□ -0.38
GFM1-210ENST00000486715 DAPK1P53355 1430 aa12.65□□□□□ -0.38
GFM1-210ENST00000486715 VGLL3A8MV65 326 aa12.65□□□□□ -0.38
GFM1-210ENST00000486715 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
GFM1-210ENST00000486715 HECW1Q76N89 1606 aa12.65□□□□□ -0.38
GFM1-210ENST00000486715 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
GFM1-210ENST00000486715 EIF3AQ14152 1382 aaKnown RBP12.64□□□□□ -0.39
GFM1-210ENST00000486715 ABCC5O15440 1437 aa12.64□□□□□ -0.39
GFM1-210ENST00000486715 CARMIL2Q6F5E8 1435 aa12.64□□□□□ -0.39
GFM1-210ENST00000486715 PLB1Q6P1J6 1458 aa12.63□□□□□ -0.39
GFM1-210ENST00000486715 PRPF40AO75400 957 aaKnown RBP12.63□□□□□ -0.39
GFM1-210ENST00000486715 ZNF830Q96NB3 372 aaPredicted RBP12.63□□□□□ -0.39
GFM1-210ENST00000486715 NOL8Q76FK4 1167 aaKnown RBP12.63□□□□□ -0.39
GFM1-210ENST00000486715 MAP7D2Q96T17 732 aa12.63□□□□□ -0.39
GFM1-210ENST00000486715 PLCD3Q8N3E9 789 aa12.63□□□□□ -0.39
GFM1-210ENST00000486715 ABCA8O94911 1581 aa12.62□□□□□ -0.39
GFM1-210ENST00000486715 CHMP4BQ9H444 224 aaKnown RBP12.62□□□□□ -0.39
GFM1-210ENST00000486715 SMC4Q9NTJ3 1288 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms