RNA–Protein interactions for RNA: ENST00000486556.1

TRADD-202, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2 BASIC

Gene TRADD, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-202ENST00000486556 MLECQ14165 292 aa30.07■■■□□ 2.4
TRADD-202ENST00000486556 ADGRF5Q8IZF2 1346 aa30.06■■■□□ 2.4
TRADD-202ENST00000486556 ESF1Q9H501 851 aaKnown RBP30.06■■■□□ 2.4
TRADD-202ENST00000486556 CLTCQ00610 1675 aaKnown RBP30.06■■■□□ 2.4
TRADD-202ENST00000486556 ERVK-7P63135 1459 aa30.05■■■□□ 2.4
TRADD-202ENST00000486556 FBXO31Q5XUX0 539 aaPredicted RBP30.03■■■□□ 2.4
TRADD-202ENST00000486556 PPLO60437 1756 aa30.02■■■□□ 2.4
TRADD-202ENST00000486556 CCER2I3L3R5 266 aa30.01■■■□□ 2.39
TRADD-202ENST00000486556 VGFO15240 615 aaPredicted RBP30.01■■■□□ 2.39
TRADD-202ENST00000486556 SCAF11Q99590 1463 aaKnown RBP30■■■□□ 2.39
TRADD-202ENST00000486556 CFAP70Q5T0N1 1121 aa29.99■■■□□ 2.39
TRADD-202ENST00000486556 ZMYM3Q14202 1370 aa29.98■■■□□ 2.39
TRADD-202ENST00000486556 SPATA31D1Q6ZQQ2 1576 aa29.98■■■□□ 2.39
TRADD-202ENST00000486556 TESK2Q96S53 571 aa29.98■■■□□ 2.39
TRADD-202ENST00000486556 IQGAP1P46940 1657 aa29.96■■■□□ 2.39
TRADD-202ENST00000486556 PIK3C2GO75747 1445 aa29.95■■■□□ 2.39
TRADD-202ENST00000486556 ZFYVE9O95405 1425 aa29.95■■■□□ 2.39
TRADD-202ENST00000486556 C14orf93Q9H972 538 aaKnown RBP29.95■■■□□ 2.39
TRADD-202ENST00000486556 TMEM131LA2VDJ0 1609 aa29.95■■■□□ 2.38
TRADD-202ENST00000486556 CENPBP07199 599 aaPredicted RBP29.94■■■□□ 2.38
TRADD-202ENST00000486556 EIF3AQ14152 1382 aaKnown RBP29.94■■■□□ 2.38
TRADD-202ENST00000486556 NEXMIFQ5QGS0 1516 aa29.94■■■□□ 2.38
TRADD-202ENST00000486556 SLC24A1O60721 1099 aa29.92■■■□□ 2.38
TRADD-202ENST00000486556 TMF1P82094 1093 aa29.92■■■□□ 2.38
TRADD-202ENST00000486556 POLR3GLQ9BT43 218 aa29.92■■■□□ 2.38
TRADD-202ENST00000486556 SETBP1Q9Y6X0 1596 aa29.91■■■□□ 2.38
TRADD-202ENST00000486556 YTHDC1Q96MU7 727 aaKnown RBP29.87■■■□□ 2.37
TRADD-202ENST00000486556 STAG3Q9UJ98 1225 aa29.87■■■□□ 2.37
TRADD-202ENST00000486556 CDCA8Q53HL2 280 aa29.83■■■□□ 2.37
TRADD-202ENST00000486556 PRKRIP1Q9H875 184 aaPredicted RBP29.82■■■□□ 2.36
TRADD-202ENST00000486556 MYO5BQ9ULV0 1848 aa29.82■■■□□ 2.36
TRADD-202ENST00000486556 DISP3Q9P2K9 1392 aa29.81■■■□□ 2.36
TRADD-202ENST00000486556 A2ML1A8K2U0 1454 aa29.79■■■□□ 2.36
TRADD-202ENST00000486556 ADGRB1O14514 1584 aa29.79■■■□□ 2.36
TRADD-202ENST00000486556 NUTM2DQ5VT03 806 aaPredicted RBP29.78■■■□□ 2.36
TRADD-202ENST00000486556 TNRQ92752 1358 aa29.77■■■□□ 2.36
TRADD-202ENST00000486556 SBNO2Q9Y2G9 1366 aa29.74■■■□□ 2.35
TRADD-202ENST00000486556 MYO3AQ8NEV4 1616 aa29.72■■■□□ 2.35
TRADD-202ENST00000486556 TMEM132EQ6IEE7 984 aa29.71■■■□□ 2.35
TRADD-202ENST00000486556 HDGFP51858 240 aaKnown RBP29.71■■■□□ 2.35
TRADD-202ENST00000486556 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.71■■■□□ 2.35
TRADD-202ENST00000486556 CENPJQ9HC77 1338 aaPredicted RBP29.7■■■□□ 2.35
TRADD-202ENST00000486556 KDM5AP29375 1690 aaKnown RBP29.7■■■□□ 2.34
TRADD-202ENST00000486556 TRAK1Q9UPV9 953 aa29.69■■■□□ 2.34
TRADD-202ENST00000486556 RIMS2Q9UQ26 1411 aa29.69■■■□□ 2.34
TRADD-202ENST00000486556 KTN1Q86UP2 1357 aaKnown RBP29.66■■■□□ 2.34
TRADD-202ENST00000486556 NLRP1Q9C000 1473 aa29.65■■■□□ 2.34
TRADD-202ENST00000486556 PER1O15534 1290 aaPredicted RBP29.64■■■□□ 2.34
TRADD-202ENST00000486556 FER1L4A9Z1Z3 1794 aa29.63■■■□□ 2.33
TRADD-202ENST00000486556 PANK3Q9H999 370 aa29.61■■■□□ 2.33
TRADD-202ENST00000486556 CEBPAP49715 358 aaPredicted RBP29.61■■■□□ 2.33
TRADD-202ENST00000486556 ALKQ9UM73 1620 aa29.61■■■□□ 2.33
TRADD-202ENST00000486556 RALBP1Q15311 655 aa29.6■■■□□ 2.33
TRADD-202ENST00000486556 C3P01024 1663 aa29.6■■■□□ 2.33
TRADD-202ENST00000486556 TMEM2Q9UHN6 1383 aa29.57■■■□□ 2.32
TRADD-202ENST00000486556 UBR1Q8IWV7 1749 aa29.56■■■□□ 2.32
TRADD-202ENST00000486556 ASXL1Q8IXJ9 1541 aa29.56■■■□□ 2.32
TRADD-202ENST00000486556 PUS7Q96PZ0 661 aaKnown RBP29.56■■■□□ 2.32
TRADD-202ENST00000486556 YTHDC2Q9H6S0 1430 aaKnown RBP29.54■■■□□ 2.32
TRADD-202ENST00000486556 ARHGEF28Q8N1W1 1705 aaKnown RBP29.54■■■□□ 2.32
TRADD-202ENST00000486556 QRICH2Q9H0J4 1663 aa29.54■■■□□ 2.32
TRADD-202ENST00000486556 MRS2Q9HD23 443 aa29.52■■■□□ 2.32
TRADD-202ENST00000486556 CCDC184Q52MB2 194 aa29.5■■■□□ 2.31
TRADD-202ENST00000486556 STK26Q9P289 416 aa29.5■■■□□ 2.31
TRADD-202ENST00000486556 EVC2Q86UK5 1308 aa29.49■■■□□ 2.31
TRADD-202ENST00000486556 KNSTRNQ9Y448 316 aa29.48■■■□□ 2.31
TRADD-202ENST00000486556 MYBBP1AQ9BQG0 1328 aaKnown RBP29.47■■■□□ 2.31
TRADD-202ENST00000486556 PARD3Q8TEW0 1356 aa29.47■■■□□ 2.31
TRADD-202ENST00000486556 PTPRMP28827 1452 aa29.46■■■□□ 2.31
TRADD-202ENST00000486556 MYOM1P52179 1685 aa29.46■■■□□ 2.31
TRADD-202ENST00000486556 SENP3Q9H4L4 574 aaPredicted RBP29.45■■■□□ 2.31
TRADD-202ENST00000486556 LRPPRCP42704 1394 aaKnown RBP29.45■■■□□ 2.3
TRADD-202ENST00000486556 CNGB1Q14028 1251 aaPredicted RBP29.45■■■□□ 2.3
TRADD-202ENST00000486556 THEMISQ8N1K5 641 aaPredicted RBP29.44■■■□□ 2.3
TRADD-202ENST00000486556 SETD1AO15047 1707 aaKnown RBP29.44■■■□□ 2.3
TRADD-202ENST00000486556 ABCC11Q96J66 1382 aa29.44■■■□□ 2.3
TRADD-202ENST00000486556 DLC1Q96QB1 1528 aa29.43■■■□□ 2.3
TRADD-202ENST00000486556 NRXN3Q9Y4C0 1643 aa29.43■■■□□ 2.3
TRADD-202ENST00000486556 POGKQ9P215 609 aa29.43■■■□□ 2.3
TRADD-202ENST00000486556 PRAM1Q96QH2 718 aa29.42■■■□□ 2.3
TRADD-202ENST00000486556 EID1Q9Y6B2 187 aa29.42■■■□□ 2.3
TRADD-202ENST00000486556 BRD4O60885 1362 aaPredicted RBP29.4■■■□□ 2.3
TRADD-202ENST00000486556 NPC1L1Q9UHC9 1359 aa29.4■■■□□ 2.3
TRADD-202ENST00000486556 SLIT1O75093 1534 aa29.4■■■□□ 2.3
TRADD-202ENST00000486556 TXNDC2Q86VQ3 553 aa29.4■■■□□ 2.3
TRADD-202ENST00000486556 PLEKHG1Q9ULL1 1385 aa29.4■■■□□ 2.3
TRADD-202ENST00000486556 ADAMTSL3P82987 1691 aa29.4■■■□□ 2.3
TRADD-202ENST00000486556 ARHGAP23Q9P227 1491 aa29.39■■■□□ 2.3
TRADD-202ENST00000486556 PLPPR3Q6T4P5 718 aa29.39■■■□□ 2.3
TRADD-202ENST00000486556 TMC1Q8TDI8 760 aa29.38■■■□□ 2.29
TRADD-202ENST00000486556 SIRT1Q96EB6 747 aa29.38■■■□□ 2.29
TRADD-202ENST00000486556 LTKP29376 864 aa29.38■■■□□ 2.29
TRADD-202ENST00000486556 AMER1Q5JTC6 1135 aaPredicted RBP29.38■■■□□ 2.29
TRADD-202ENST00000486556 RIMS1Q86UR5 1692 aaKnown RBP29.37■■■□□ 2.29
TRADD-202ENST00000486556 CC2D1BQ5T0F9 858 aaKnown RBP29.37■■■□□ 2.29
TRADD-202ENST00000486556 NLRP13Q86W25 1043 aa29.37■■■□□ 2.29
TRADD-202ENST00000486556 BCANQ96GW7 911 aa29.37■■■□□ 2.29
TRADD-202ENST00000486556 TULP4Q9NRJ4 1543 aa29.36■■■□□ 2.29
TRADD-202ENST00000486556 METP08581 1390 aa29.36■■■□□ 2.29
TRADD-202ENST00000486556 SAFB2Q14151 953 aaKnown RBP eCLIP29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms