RNA–Protein interactions for RNA: ENST00000486021.5

CPNE1-226, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-226ENST00000486021 PIP4K2BP78356 416 aa11.24□□□□□ -0.61
CPNE1-226ENST00000486021 DISP3Q9P2K9 1392 aa11.24□□□□□ -0.61
CPNE1-226ENST00000486021 TMEM131LA2VDJ0 1609 aa11.24□□□□□ -0.61
CPNE1-226ENST00000486021 KCNA6P17658 529 aa11.23□□□□□ -0.61
CPNE1-226ENST00000486021 LRRC7Q96NW7 1537 aa11.23□□□□□ -0.61
CPNE1-226ENST00000486021 DIP2AQ14689 1571 aa11.23□□□□□ -0.61
CPNE1-226ENST00000486021 NKTRP30414 1462 aaKnown RBP11.21□□□□□ -0.61
CPNE1-226ENST00000486021 RIMS2Q9UQ26 1411 aa11.21□□□□□ -0.61
CPNE1-226ENST00000486021 PLEKHG1Q9ULL1 1385 aa11.21□□□□□ -0.61
CPNE1-226ENST00000486021 PPARGC1BQ86YN6 1023 aaKnown RBP11.21□□□□□ -0.61
CPNE1-226ENST00000486021 XIRP1Q702N8 1843 aaKnown RBP11.21□□□□□ -0.62
CPNE1-226ENST00000486021 PROSER2Q86WR7 435 aaPredicted RBP11.2□□□□□ -0.62
CPNE1-226ENST00000486021 MSH6P52701 1360 aa11.19□□□□□ -0.62
CPNE1-226ENST00000486021 PIK3R4Q99570 1358 aa11.19□□□□□ -0.62
CPNE1-226ENST00000486021 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
CPNE1-226ENST00000486021 TBX22Q9Y458 520 aa11.19□□□□□ -0.62
CPNE1-226ENST00000486021 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
CPNE1-226ENST00000486021 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
CPNE1-226ENST00000486021 ZNF326Q5BKZ1 582 aaKnown RBP11.18□□□□□ -0.62
CPNE1-226ENST00000486021 SLC26A8Q96RN1 970 aa11.18□□□□□ -0.62
CPNE1-226ENST00000486021 TRPM2O94759 1503 aa11.18□□□□□ -0.62
CPNE1-226ENST00000486021 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
CPNE1-226ENST00000486021 C14orf37Q86TY3 774 aa11.16□□□□□ -0.62
CPNE1-226ENST00000486021 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
CPNE1-226ENST00000486021 PHF23Q9BUL5 403 aaPredicted RBP11.15□□□□□ -0.62
CPNE1-226ENST00000486021 NAIPQ13075 1403 aa11.15□□□□□ -0.62
CPNE1-226ENST00000486021 VGFO15240 615 aaPredicted RBP11.14□□□□□ -0.63
CPNE1-226ENST00000486021 HSPA1LP34931 641 aa11.14□□□□□ -0.63
CPNE1-226ENST00000486021 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
CPNE1-226ENST00000486021 TMEM94Q12767 1356 aa11.14□□□□□ -0.63
CPNE1-226ENST00000486021 FAM135BQ49AJ0 1406 aa11.13□□□□□ -0.63
CPNE1-226ENST00000486021 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
CPNE1-226ENST00000486021 ROBO1Q9Y6N7 1651 aa11.12□□□□□ -0.63
CPNE1-226ENST00000486021 ATF3P18847 181 aa11.12□□□□□ -0.63
CPNE1-226ENST00000486021 CADPS2Q86UW7 1296 aa11.12□□□□□ -0.63
CPNE1-226ENST00000486021 MED1Q15648 1581 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-226ENST00000486021 SETBP1Q9Y6X0 1596 aa11.11□□□□□ -0.63
CPNE1-226ENST00000486021 CLTCL1P53675 1640 aa11.1□□□□□ -0.63
CPNE1-226ENST00000486021 PHLPP1O60346 1717 aa11.1□□□□□ -0.63
CPNE1-226ENST00000486021 C19orf44Q9H6X5 657 aa11.1□□□□□ -0.63
CPNE1-226ENST00000486021 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-226ENST00000486021 SLAIN2Q9P270 581 aa11.09□□□□□ -0.63
CPNE1-226ENST00000486021 PPLO60437 1756 aa11.08□□□□□ -0.64
CPNE1-226ENST00000486021 SOCS7O14512 581 aa11.08□□□□□ -0.64
CPNE1-226ENST00000486021 AMOTL2Q9Y2J4 779 aa11.08□□□□□ -0.64
CPNE1-226ENST00000486021 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
CPNE1-226ENST00000486021 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-226ENST00000486021 CCDC144AA2RUR9 1427 aa11.07□□□□□ -0.64
CPNE1-226ENST00000486021 DCCP43146 1447 aa11.07□□□□□ -0.64
CPNE1-226ENST00000486021 ADAMTS13Q76LX8 1427 aa11.07□□□□□ -0.64
CPNE1-226ENST00000486021 NEXMIFQ5QGS0 1516 aa11.06□□□□□ -0.64
CPNE1-226ENST00000486021 XRN1Q8IZH2 1706 aaKnown RBP11.05□□□□□ -0.64
CPNE1-226ENST00000486021 SENP3Q9H4L4 574 aaPredicted RBP11.05□□□□□ -0.64
CPNE1-226ENST00000486021 NRXN3Q9Y4C0 1643 aa11.04□□□□□ -0.64
CPNE1-226ENST00000486021 SETD5Q9C0A6 1442 aa11.03□□□□□ -0.64
CPNE1-226ENST00000486021 MPHOSPH9Q99550 1183 aa11.03□□□□□ -0.64
CPNE1-226ENST00000486021 ANKRD30BQ9BXX2 1392 aa11.03□□□□□ -0.64
CPNE1-226ENST00000486021 JCADQ9P266 1359 aa11.03□□□□□ -0.64
CPNE1-226ENST00000486021 SETD1AO15047 1707 aaKnown RBP11.01□□□□□ -0.65
CPNE1-226ENST00000486021 IFT172Q9UG01 1749 aa11.01□□□□□ -0.65
CPNE1-226ENST00000486021 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
CPNE1-226ENST00000486021 SPATA31A6Q5VVP1 1343 aa11.01□□□□□ -0.65
CPNE1-226ENST00000486021 SHPRHQ149N8 1683 aa11.01□□□□□ -0.65
CPNE1-226ENST00000486021 LAMC1P11047 1609 aa11□□□□□ -0.65
CPNE1-226ENST00000486021 AHDC1Q5TGY3 1603 aaPredicted RBP11□□□□□ -0.65
CPNE1-226ENST00000486021 ILDR2Q71H61 639 aa11□□□□□ -0.65
CPNE1-226ENST00000486021 STAC3Q96MF2 364 aa11□□□□□ -0.65
CPNE1-226ENST00000486021 HRCP23327 699 aa10.99□□□□□ -0.65
CPNE1-226ENST00000486021 PTCH1Q13635 1447 aa10.99□□□□□ -0.65
CPNE1-226ENST00000486021 ADGRL3Q9HAR2 1447 aa10.99□□□□□ -0.65
CPNE1-226ENST00000486021 NALCNQ8IZF0 1738 aa10.98□□□□□ -0.65
CPNE1-226ENST00000486021 MEX3CQ5U5Q3 659 aaKnown RBP10.98□□□□□ -0.65
CPNE1-226ENST00000486021 LRRC59Q96AG4 307 aaKnown RBP10.98□□□□□ -0.65
CPNE1-226ENST00000486021 PTPRUQ92729 1446 aa10.98□□□□□ -0.65
CPNE1-226ENST00000486021 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
CPNE1-226ENST00000486021 NHSL1Q5SYE7 1610 aa10.98□□□□□ -0.65
CPNE1-226ENST00000486021 RGL3Q3MIN7 710 aa10.97□□□□□ -0.65
CPNE1-226ENST00000486021 METP08581 1390 aa10.97□□□□□ -0.65
CPNE1-226ENST00000486021 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
CPNE1-226ENST00000486021 PRAG1Q86YV5 1406 aa10.95□□□□□ -0.66
CPNE1-226ENST00000486021 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
CPNE1-226ENST00000486021 ZNF772Q68DY9 489 aaPredicted RBP10.95□□□□□ -0.66
CPNE1-226ENST00000486021 ASXL1Q8IXJ9 1541 aa10.94□□□□□ -0.66
CPNE1-226ENST00000486021 DHX57Q6P158 1386 aaKnown RBP10.94□□□□□ -0.66
CPNE1-226ENST00000486021 RAB3GAP2Q9H2M9 1393 aa10.94□□□□□ -0.66
CPNE1-226ENST00000486021 BRINP3Q76B58 766 aa10.94□□□□□ -0.66
CPNE1-226ENST00000486021 MST1RQ04912 1400 aa10.93□□□□□ -0.66
CPNE1-226ENST00000486021 FOXD1Q16676 465 aa10.92□□□□□ -0.66
CPNE1-226ENST00000486021 SIRT1Q96EB6 747 aa10.92□□□□□ -0.66
CPNE1-226ENST00000486021 SPATA31E1Q6ZUB1 1445 aa10.92□□□□□ -0.66
CPNE1-226ENST00000486021 CDC42BPGQ6DT37 1551 aa10.91□□□□□ -0.66
CPNE1-226ENST00000486021 MYOM2P54296 1465 aa10.91□□□□□ -0.66
CPNE1-226ENST00000486021 KIF1AQ12756 1690 aa10.91□□□□□ -0.66
CPNE1-226ENST00000486021 ABCC11Q96J66 1382 aa10.9□□□□□ -0.66
CPNE1-226ENST00000486021 NPHP3Q7Z494 1330 aa10.9□□□□□ -0.66
CPNE1-226ENST00000486021 C1orf167Q5SNV9 1468 aa10.9□□□□□ -0.66
CPNE1-226ENST00000486021 PIK3C2GO75747 1445 aa10.9□□□□□ -0.66
CPNE1-226ENST00000486021 ADGRF5Q8IZF2 1346 aa10.89□□□□□ -0.67
CPNE1-226ENST00000486021 TECPR2O15040 1411 aa10.89□□□□□ -0.67
CPNE1-226ENST00000486021 YTHDC2Q9H6S0 1430 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms