RNA–Protein interactions for RNA: ENST00000485892.5

ZNF3-214, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 722 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-214ENST00000485892 RIMS2Q9UQ26 1411 aa16.96■□□□□ 0.31
ZNF3-214ENST00000485892 CPS1P31327 1500 aa16.96■□□□□ 0.31
ZNF3-214ENST00000485892 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
ZNF3-214ENST00000485892 SETD5Q9C0A6 1442 aa16.96■□□□□ 0.3
ZNF3-214ENST00000485892 ZNF326Q5BKZ1 582 aaKnown RBP16.95■□□□□ 0.3
ZNF3-214ENST00000485892 TRPM2O94759 1503 aa16.95■□□□□ 0.3
ZNF3-214ENST00000485892 IQSEC2Q5JU85 1478 aa16.94■□□□□ 0.3
ZNF3-214ENST00000485892 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
ZNF3-214ENST00000485892 FOXD1Q16676 465 aa16.93■□□□□ 0.3
ZNF3-214ENST00000485892 ZFYVE9O95405 1425 aa16.92■□□□□ 0.3
ZNF3-214ENST00000485892 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
ZNF3-214ENST00000485892 RAB3GAP2Q9H2M9 1393 aa16.9■□□□□ 0.3
ZNF3-214ENST00000485892 UBAP1LF5GYI3 381 aa16.9■□□□□ 0.3
ZNF3-214ENST00000485892 XIRP1Q702N8 1843 aaKnown RBP16.9■□□□□ 0.3
ZNF3-214ENST00000485892 MPHOSPH9Q99550 1183 aa16.89■□□□□ 0.29
ZNF3-214ENST00000485892 SCAF1Q9H7N4 1312 aaKnown RBP16.89■□□□□ 0.29
ZNF3-214ENST00000485892 CHD2O14647 1828 aaKnown RBP16.89■□□□□ 0.29
ZNF3-214ENST00000485892 PLEKHG1Q9ULL1 1385 aa16.89■□□□□ 0.29
ZNF3-214ENST00000485892 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
ZNF3-214ENST00000485892 ACIN1Q9UKV3 1341 aaKnown RBP16.85■□□□□ 0.29
ZNF3-214ENST00000485892 PPLO60437 1756 aa16.84■□□□□ 0.29
ZNF3-214ENST00000485892 PIP4K2BP78356 416 aa16.84■□□□□ 0.29
ZNF3-214ENST00000485892 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
ZNF3-214ENST00000485892 CCDC144AA2RUR9 1427 aa16.83■□□□□ 0.28
ZNF3-214ENST00000485892 TOM1O60784 492 aa16.83■□□□□ 0.28
ZNF3-214ENST00000485892 DIP2AQ14689 1571 aa16.83■□□□□ 0.28
ZNF3-214ENST00000485892 KCNA6P17658 529 aa16.82■□□□□ 0.28
ZNF3-214ENST00000485892 NWD1Q149M9 1564 aa16.81■□□□□ 0.28
ZNF3-214ENST00000485892 PROSER2Q86WR7 435 aaPredicted RBP16.81■□□□□ 0.28
ZNF3-214ENST00000485892 RBM33Q96EV2 1170 aaKnown RBP16.81■□□□□ 0.28
ZNF3-214ENST00000485892 NRXN3Q9Y4C0 1643 aa16.81■□□□□ 0.28
ZNF3-214ENST00000485892 ADAMTS13Q76LX8 1427 aa16.79■□□□□ 0.28
ZNF3-214ENST00000485892 RGL3Q3MIN7 710 aa16.79■□□□□ 0.28
ZNF3-214ENST00000485892 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
ZNF3-214ENST00000485892 SETBP1Q9Y6X0 1596 aa16.78■□□□□ 0.28
ZNF3-214ENST00000485892 IFT172Q9UG01 1749 aa16.78■□□□□ 0.28
ZNF3-214ENST00000485892 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
ZNF3-214ENST00000485892 TMEM94Q12767 1356 aa16.77■□□□□ 0.27
ZNF3-214ENST00000485892 VGFO15240 615 aaPredicted RBP16.75■□□□□ 0.27
ZNF3-214ENST00000485892 C14orf37Q86TY3 774 aa16.75■□□□□ 0.27
ZNF3-214ENST00000485892 ALKQ9UM73 1620 aa16.74■□□□□ 0.27
ZNF3-214ENST00000485892 RPGRIP1LQ68CZ1 1315 aa16.73■□□□□ 0.27
ZNF3-214ENST00000485892 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
ZNF3-214ENST00000485892 SETD1AO15047 1707 aaKnown RBP16.73■□□□□ 0.27
ZNF3-214ENST00000485892 PIK3R4Q99570 1358 aa16.72■□□□□ 0.27
ZNF3-214ENST00000485892 XRN1Q8IZH2 1706 aaKnown RBP16.71■□□□□ 0.27
ZNF3-214ENST00000485892 MSH6P52701 1360 aa16.71■□□□□ 0.27
ZNF3-214ENST00000485892 PTPRUQ92729 1446 aa16.7■□□□□ 0.26
ZNF3-214ENST00000485892 METP08581 1390 aa16.7■□□□□ 0.26
ZNF3-214ENST00000485892 HRCP23327 699 aa16.7■□□□□ 0.26
ZNF3-214ENST00000485892 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.7■□□□□ 0.26
ZNF3-214ENST00000485892 SPATA31E1Q6ZUB1 1445 aa16.7■□□□□ 0.26
ZNF3-214ENST00000485892 ROBO1Q9Y6N7 1651 aa16.68■□□□□ 0.26
ZNF3-214ENST00000485892 HSPA1LP34931 641 aa16.67■□□□□ 0.26
ZNF3-214ENST00000485892 ADGRF5Q8IZF2 1346 aa16.67■□□□□ 0.26
ZNF3-214ENST00000485892 ANKRD30BQ9BXX2 1392 aa16.66■□□□□ 0.26
ZNF3-214ENST00000485892 NALCNQ8IZF0 1738 aa16.65■□□□□ 0.26
ZNF3-214ENST00000485892 ATF3P18847 181 aa16.62■□□□□ 0.25
ZNF3-214ENST00000485892 KDM2AQ9Y2K7 1162 aa16.62■□□□□ 0.25
ZNF3-214ENST00000485892 PHLPP1O60346 1717 aa16.62■□□□□ 0.25
ZNF3-214ENST00000485892 NCOA3Q9Y6Q9 1424 aa16.62■□□□□ 0.25
ZNF3-214ENST00000485892 LAMC1P11047 1609 aa16.61■□□□□ 0.25
ZNF3-214ENST00000485892 C19orf44Q9H6X5 657 aa16.6■□□□□ 0.25
ZNF3-214ENST00000485892 SLAIN2Q9P270 581 aa16.6■□□□□ 0.25
ZNF3-214ENST00000485892 STK26Q9P289 416 aa16.6■□□□□ 0.25
ZNF3-214ENST00000485892 TRIM26Q12899 539 aaPredicted RBP16.59■□□□□ 0.25
ZNF3-214ENST00000485892 CADPS2Q86UW7 1296 aa16.59■□□□□ 0.25
ZNF3-214ENST00000485892 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
ZNF3-214ENST00000485892 PIK3C2GO75747 1445 aa16.59■□□□□ 0.25
ZNF3-214ENST00000485892 MYOM2P54296 1465 aa16.59■□□□□ 0.25
ZNF3-214ENST00000485892 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.24
ZNF3-214ENST00000485892 KNDC1Q76NI1 1749 aa16.58■□□□□ 0.24
ZNF3-214ENST00000485892 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
ZNF3-214ENST00000485892 DISP3Q9P2K9 1392 aa16.57■□□□□ 0.24
ZNF3-214ENST00000485892 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
ZNF3-214ENST00000485892 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
ZNF3-214ENST00000485892 ADGRL3Q9HAR2 1447 aa16.55■□□□□ 0.24
ZNF3-214ENST00000485892 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
ZNF3-214ENST00000485892 CFAP70Q5T0N1 1121 aa16.55■□□□□ 0.24
ZNF3-214ENST00000485892 DCCP43146 1447 aa16.53■□□□□ 0.24
ZNF3-214ENST00000485892 NRXN1Q9ULB1 1477 aa16.53■□□□□ 0.24
ZNF3-214ENST00000485892 MED1Q15648 1581 aaPredicted RBP16.52■□□□□ 0.24
ZNF3-214ENST00000485892 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
ZNF3-214ENST00000485892 YTHDC2Q9H6S0 1430 aaKnown RBP16.52■□□□□ 0.23
ZNF3-214ENST00000485892 DHX57Q6P158 1386 aaKnown RBP16.51■□□□□ 0.23
ZNF3-214ENST00000485892 WAPLQ7Z5K2 1190 aa16.51■□□□□ 0.23
ZNF3-214ENST00000485892 LRPPRCP42704 1394 aaKnown RBP16.51■□□□□ 0.23
ZNF3-214ENST00000485892 NEUROD1Q13562 356 aa16.5■□□□□ 0.23
ZNF3-214ENST00000485892 MST1RQ04912 1400 aa16.5■□□□□ 0.23
ZNF3-214ENST00000485892 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
ZNF3-214ENST00000485892 SAFB2Q14151 953 aaKnown RBP eCLIP16.48■□□□□ 0.23
ZNF3-214ENST00000485892 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
ZNF3-214ENST00000485892 COL16A1Q07092 1604 aaPredicted RBP16.48■□□□□ 0.23
ZNF3-214ENST00000485892 BRINP3Q76B58 766 aa16.47■□□□□ 0.23
ZNF3-214ENST00000485892 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
ZNF3-214ENST00000485892 NHSL1Q5SYE7 1610 aa16.47■□□□□ 0.23
ZNF3-214ENST00000485892 ABCC11Q96J66 1382 aa16.47■□□□□ 0.23
ZNF3-214ENST00000485892 PLEKHH1Q9ULM0 1364 aa16.47■□□□□ 0.23
ZNF3-214ENST00000485892 TECPR2O15040 1411 aa16.46■□□□□ 0.23
ZNF3-214ENST00000485892 AHDC1Q5TGY3 1603 aaPredicted RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms