RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 GRIN2AQ12879 1464 aa8.98□□□□□ -0.97
NHLRC3-205ENST00000485407 ERBB3P21860 1342 aa8.98□□□□□ -0.97
NHLRC3-205ENST00000485407 TMC2Q8TDI7 906 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 KRTAP3-3Q9BYR6 98 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 KRTAP3-2Q9BYR7 98 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 SHROOM2Q13796 1616 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 CARMIL1Q5VZK9 1371 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 EEA1Q15075 1411 aa8.97□□□□□ -0.97
NHLRC3-205ENST00000485407 ARSIQ5FYB1 569 aa8.96□□□□□ -0.98
NHLRC3-205ENST00000485407 NUP160Q12769 1436 aa8.96□□□□□ -0.98
NHLRC3-205ENST00000485407 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
NHLRC3-205ENST00000485407 CERKQ8TCT0 537 aa8.95□□□□□ -0.98
NHLRC3-205ENST00000485407 VARS2Q5ST30 1063 aaKnown RBP8.94□□□□□ -0.98
NHLRC3-205ENST00000485407 SPNS2Q8IVW8 549 aa8.94□□□□□ -0.98
NHLRC3-205ENST00000485407 DPYSL4O14531 572 aa8.93□□□□□ -0.98
NHLRC3-205ENST00000485407 SLC34A2O95436 690 aa8.93□□□□□ -0.98
NHLRC3-205ENST00000485407 KHSRPQ92945 711 aaKnown RBP eCLIP8.93□□□□□ -0.982e-10■■■■■ 27.7
NHLRC3-205ENST00000485407 RUSC2Q8N2Y8 1516 aa8.92□□□□□ -0.98
NHLRC3-205ENST00000485407 RAPGEF2Q9Y4G8 1499 aa8.92□□□□□ -0.98
NHLRC3-205ENST00000485407 MINK1Q8N4C8 1332 aaPredicted RBP8.92□□□□□ -0.98
NHLRC3-205ENST00000485407 PPP1R15BQ5SWA1 713 aa8.92□□□□□ -0.98
NHLRC3-205ENST00000485407 COL17A1Q9UMD9 1497 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-205ENST00000485407 SPDYE16A6NNV3 312 aaPredicted RBP8.91□□□□□ -0.98
NHLRC3-205ENST00000485407 CCDC82Q8N4S0 544 aa8.91□□□□□ -0.98
NHLRC3-205ENST00000485407 PRG4Q92954 1404 aaPredicted RBP8.9□□□□□ -0.98
NHLRC3-205ENST00000485407 GPHNQ9NQX3 736 aaPredicted RBP8.9□□□□□ -0.98
NHLRC3-205ENST00000485407 KIAA0586Q9BVV6 1533 aa8.9□□□□□ -0.99
NHLRC3-205ENST00000485407 PRXQ9BXM0 1461 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 TRAK2O60296 914 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 FOXK1P85037 733 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 CCDC102AQ96A19 550 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 CLUAP1Q96AJ1 413 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 PCDHGA4Q9Y5G9 962 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 ADCY10Q96PN6 1610 aa8.89□□□□□ -0.99
NHLRC3-205ENST00000485407 PPRC1Q5VV67 1664 aaKnown RBP8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 NUTM2FA1L443 756 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 GPR37O15354 613 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 MAP2K5Q13163 448 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 MMRN1Q13201 1228 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 PARP9Q8IXQ6 854 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 JPH4Q96JJ6 628 aa8.88□□□□□ -0.99
NHLRC3-205ENST00000485407 A6NJR5 290 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 IRF6O14896 467 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 NUDT7P0C024 238 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 PDIA6Q15084 440 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 ZNF687Q8N1G0 1237 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 NECTIN2Q92692 538 aa8.87□□□□□ -0.99
NHLRC3-205ENST00000485407 DSG2Q14126 1118 aa8.86□□□□□ -0.99
NHLRC3-205ENST00000485407 AMHR2Q16671 573 aa8.86□□□□□ -0.99
NHLRC3-205ENST00000485407 PLPP6Q8IY26 295 aa8.86□□□□□ -0.99
NHLRC3-205ENST00000485407 TTLL12Q14166 644 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-205ENST00000485407 PCMTD1Q96MG8 357 aaPredicted RBP8.85□□□□□ -0.99
NHLRC3-205ENST00000485407 GOPCQ9HD26 462 aa8.85□□□□□ -0.99
NHLRC3-205ENST00000485407 EMILIN3Q9NT22 766 aa8.85□□□□□ -0.99
NHLRC3-205ENST00000485407 PCF11O94913 1555 aaKnown RBP8.85□□□□□ -0.99
NHLRC3-205ENST00000485407 ONECUT3O60422 494 aaPredicted RBP8.84□□□□□ -0.99
NHLRC3-205ENST00000485407 GLI2P10070 1586 aa8.84□□□□□ -0.99
NHLRC3-205ENST00000485407 GRXCR2A6NFK2 248 aa8.83□□□□□ -1
NHLRC3-205ENST00000485407 PTCD2Q8WV60 388 aaKnown RBP8.83□□□□□ -1
NHLRC3-205ENST00000485407 PTPRMP28827 1452 aa8.83□□□□□ -1
NHLRC3-205ENST00000485407 IQGAP2Q13576 1575 aa8.82□□□□□ -1
NHLRC3-205ENST00000485407 LHX6Q9UPM6 363 aa8.82□□□□□ -1
NHLRC3-205ENST00000485407 KIF21BO75037 1637 aa8.81□□□□□ -1
NHLRC3-205ENST00000485407 CARMIL2Q6F5E8 1435 aa8.8□□□□□ -1
NHLRC3-205ENST00000485407 GNPATO15228 680 aa8.8□□□□□ -1
NHLRC3-205ENST00000485407 FAM9AQ8IZU1 332 aaPredicted RBP8.8□□□□□ -1
NHLRC3-205ENST00000485407 ZNF777Q9ULD5 760 aaPredicted RBP8.8□□□□□ -1
NHLRC3-205ENST00000485407 TEX14Q8IWB6 1497 aa8.8□□□□□ -1
NHLRC3-205ENST00000485407 CTTNBP2Q8WZ74 1663 aa8.8□□□□□ -1
NHLRC3-205ENST00000485407 UGGT2Q9NYU1 1516 aa8.8□□□□□ -1
NHLRC3-205ENST00000485407 KCTD17Q8N5Z5 321 aa8.79□□□□□ -1
NHLRC3-205ENST00000485407 PLB1Q6P1J6 1458 aa8.78□□□□□ -1
NHLRC3-205ENST00000485407 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
NHLRC3-205ENST00000485407 GOLGA3Q08378 1498 aa8.77□□□□□ -1
NHLRC3-205ENST00000485407 FCHSD2O94868 740 aa8.77□□□□□ -1.01
NHLRC3-205ENST00000485407 HIC1Q14526 733 aa8.77□□□□□ -1.01
NHLRC3-205ENST00000485407 MCM6Q14566 821 aa8.77□□□□□ -1.01
NHLRC3-205ENST00000485407 ATP1B4Q9UN42 357 aaPredicted RBP8.77□□□□□ -1.01
NHLRC3-205ENST00000485407 ASXL2Q76L83 1435 aa8.77□□□□□ -1.01
NHLRC3-205ENST00000485407 TNIKQ9UKE5 1360 aa8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 FECHP22830 423 aa8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 PROSER2Q86WR7 435 aaPredicted RBP8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 AEBP1Q8IUX7 1158 aa8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 TRAIPQ9BWF2 469 aa8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 SERPINA10Q9UK55 444 aa8.76□□□□□ -1.01
NHLRC3-205ENST00000485407 DISP1Q96F81 1524 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 PTPRGP23470 1445 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 RAD21O60216 631 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 TBC1D12O60347 775 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 HSPA2P54652 639 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 POTEEQ6S8J3 1075 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 OXER1Q8TDS5 423 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
NHLRC3-205ENST00000485407 MAP3K4Q9Y6R4 1608 aa8.74□□□□□ -1.01
NHLRC3-205ENST00000485407 PSDA5PKW4 1024 aaPredicted RBP8.74□□□□□ -1.01
NHLRC3-205ENST00000485407 MS4A1P11836 297 aa8.74□□□□□ -1.01
NHLRC3-205ENST00000485407 PBX2P40425 430 aa8.74□□□□□ -1.01
NHLRC3-205ENST00000485407 MAP3K9P80192 1104 aa8.74□□□□□ -1.01
NHLRC3-205ENST00000485407 LSM11P83369 360 aaKnown RBP eCLIP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms