RNA–Protein interactions for RNA: ENST00000485399.5

NECAB3-211, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 1,373 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-211ENST00000485399 PIK3C2BO00750 1634 aa31.53■■■□□ 2.64
NECAB3-211ENST00000485399 UBR1Q8IWV7 1749 aa31.51■■■□□ 2.64
NECAB3-211ENST00000485399 KIF1BO60333 1816 aa31.51■■■□□ 2.63
NECAB3-211ENST00000485399 TIMELESSQ9UNS1 1208 aa31.51■■■□□ 2.63
NECAB3-211ENST00000485399 TONSLQ96HA7 1378 aa31.48■■■□□ 2.63
NECAB3-211ENST00000485399 STRCP1A6NGW2 1772 aa31.47■■■□□ 2.63
NECAB3-211ENST00000485399 IDI1Q13907 227 aa31.47■■■□□ 2.63
NECAB3-211ENST00000485399 ALKQ9UM73 1620 aa31.44■■■□□ 2.62
NECAB3-211ENST00000485399 SPATA31E1Q6ZUB1 1445 aa31.42■■■□□ 2.62
NECAB3-211ENST00000485399 SOCS7O14512 581 aa31.41■■■□□ 2.62
NECAB3-211ENST00000485399 CHGAP10645 457 aaKnown RBP31.4■■■□□ 2.62
NECAB3-211ENST00000485399 ARHGAP23Q9P227 1491 aa31.4■■■□□ 2.62
NECAB3-211ENST00000485399 SLIT1O75093 1534 aa31.39■■■□□ 2.62
NECAB3-211ENST00000485399 TOM1O60784 492 aa31.39■■■□□ 2.62
NECAB3-211ENST00000485399 ADGRB3O60242 1522 aa31.38■■■□□ 2.61
NECAB3-211ENST00000485399 SCAF11Q99590 1463 aaKnown RBP31.37■■■□□ 2.61
NECAB3-211ENST00000485399 RGL3Q3MIN7 710 aa31.37■■■□□ 2.61
NECAB3-211ENST00000485399 TMEM131LA2VDJ0 1609 aa31.36■■■□□ 2.61
NECAB3-211ENST00000485399 HSPA1LP34931 641 aa31.36■■■□□ 2.61
NECAB3-211ENST00000485399 PIP4K2BP78356 416 aa31.36■■■□□ 2.61
NECAB3-211ENST00000485399 L3MBTL2Q969R5 705 aa31.36■■■□□ 2.61
NECAB3-211ENST00000485399 LRRC7Q96NW7 1537 aa31.35■■■□□ 2.61
NECAB3-211ENST00000485399 STAG3Q9UJ98 1225 aa31.35■■■□□ 2.61
NECAB3-211ENST00000485399 KDM5AP29375 1690 aaKnown RBP31.35■■■□□ 2.61
NECAB3-211ENST00000485399 SCAF1Q9H7N4 1312 aaKnown RBP31.34■■■□□ 2.61
NECAB3-211ENST00000485399 LTKP29376 864 aa31.32■■■□□ 2.6
NECAB3-211ENST00000485399 MYO5BQ9ULV0 1848 aa31.32■■■□□ 2.6
NECAB3-211ENST00000485399 ZNF326Q5BKZ1 582 aaKnown RBP31.3■■■□□ 2.6
NECAB3-211ENST00000485399 RPGRIP1LQ68CZ1 1315 aa31.29■■■□□ 2.6
NECAB3-211ENST00000485399 STAC3Q96MF2 364 aa31.28■■■□□ 2.6
NECAB3-211ENST00000485399 DCAF11Q8TEB1 546 aa31.27■■■□□ 2.6
NECAB3-211ENST00000485399 PPP1R15AO75807 674 aaPredicted RBP31.26■■■□□ 2.59
NECAB3-211ENST00000485399 TXNDC2Q86VQ3 553 aa31.26■■■□□ 2.59
NECAB3-211ENST00000485399 MED1Q15648 1581 aaPredicted RBP31.26■■■□□ 2.59
NECAB3-211ENST00000485399 IFT172Q9UG01 1749 aa31.23■■■□□ 2.59
NECAB3-211ENST00000485399 TMEM2Q9UHN6 1383 aa31.23■■■□□ 2.59
NECAB3-211ENST00000485399 KDM2AQ9Y2K7 1162 aa31.22■■■□□ 2.59
NECAB3-211ENST00000485399 PPLO60437 1756 aa31.22■■■□□ 2.59
NECAB3-211ENST00000485399 XIRP1Q702N8 1843 aaKnown RBP31.22■■■□□ 2.59
NECAB3-211ENST00000485399 NEXMIFQ5QGS0 1516 aa31.2■■■□□ 2.58
NECAB3-211ENST00000485399 EID1Q9Y6B2 187 aa31.17■■■□□ 2.58
NECAB3-211ENST00000485399 MYOM2P54296 1465 aa31.17■■■□□ 2.58
NECAB3-211ENST00000485399 HDGFP51858 240 aaKnown RBP31.17■■■□□ 2.58
NECAB3-211ENST00000485399 VGFO15240 615 aaPredicted RBP31.16■■■□□ 2.58
NECAB3-211ENST00000485399 RIMS2Q9UQ26 1411 aa31.15■■■□□ 2.58
NECAB3-211ENST00000485399 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.14■■■□□ 2.58
NECAB3-211ENST00000485399 ZFYVE9O95405 1425 aa31.13■■■□□ 2.57
NECAB3-211ENST00000485399 PRAG1Q86YV5 1406 aa31.1■■■□□ 2.57
NECAB3-211ENST00000485399 NBPF8Q3BBV2 869 aa31.09■■■□□ 2.57
NECAB3-211ENST00000485399 ADGRF5Q8IZF2 1346 aa31.08■■■□□ 2.57
NECAB3-211ENST00000485399 NRXN1Q9ULB1 1477 aa31.08■■■□□ 2.57
NECAB3-211ENST00000485399 NUTM2DQ5VT03 806 aaPredicted RBP31.06■■■□□ 2.56
NECAB3-211ENST00000485399 PIK3C2GO75747 1445 aa31■■■□□ 2.55
NECAB3-211ENST00000485399 NWD1Q149M9 1564 aa31■■■□□ 2.55
NECAB3-211ENST00000485399 SLC26A8Q96RN1 970 aa31■■■□□ 2.55
NECAB3-211ENST00000485399 SENP3Q9H4L4 574 aaPredicted RBP31■■■□□ 2.55
NECAB3-211ENST00000485399 TRPM1Q7Z4N2 1603 aa30.99■■■□□ 2.55
NECAB3-211ENST00000485399 KIAA1210Q9ULL0 1709 aa30.99■■■□□ 2.55
NECAB3-211ENST00000485399 KCNA6P17658 529 aa30.99■■■□□ 2.55
NECAB3-211ENST00000485399 TMEM94Q12767 1356 aa30.99■■■□□ 2.55
NECAB3-211ENST00000485399 RALGAPBQ86X10 1494 aa30.98■■■□□ 2.55
NECAB3-211ENST00000485399 NKTRP30414 1462 aaKnown RBP30.95■■■□□ 2.54
NECAB3-211ENST00000485399 PLEKHG1Q9ULL1 1385 aa30.95■■■□□ 2.54
NECAB3-211ENST00000485399 FAM135BQ49AJ0 1406 aa30.94■■■□□ 2.54
NECAB3-211ENST00000485399 LAMC1P11047 1609 aa30.94■■■□□ 2.54
NECAB3-211ENST00000485399 C14orf93Q9H972 538 aaKnown RBP30.93■■■□□ 2.54
NECAB3-211ENST00000485399 SETBP1Q9Y6X0 1596 aa30.92■■■□□ 2.54
NECAB3-211ENST00000485399 CFAP70Q5T0N1 1121 aa30.92■■■□□ 2.54
NECAB3-211ENST00000485399 ROCK2O75116 1388 aaKnown RBP30.9■■■□□ 2.54
NECAB3-211ENST00000485399 CHD2O14647 1828 aaKnown RBP30.89■■■□□ 2.54
NECAB3-211ENST00000485399 RBM33Q96EV2 1170 aaKnown RBP30.89■■■□□ 2.54
NECAB3-211ENST00000485399 BCANQ96GW7 911 aa30.89■■■□□ 2.54
NECAB3-211ENST00000485399 PHF23Q9BUL5 403 aaPredicted RBP30.89■■■□□ 2.54
NECAB3-211ENST00000485399 NBPF1Q3BBV0 1214 aa30.88■■■□□ 2.53
NECAB3-211ENST00000485399 PROSER2Q86WR7 435 aaPredicted RBP30.88■■■□□ 2.53
NECAB3-211ENST00000485399 ROBO1Q9Y6N7 1651 aa30.87■■■□□ 2.53
NECAB3-211ENST00000485399 NRXN3Q9Y4C0 1643 aa30.87■■■□□ 2.53
NECAB3-211ENST00000485399 GPRASP1Q5JY77 1395 aa30.86■■■□□ 2.53
NECAB3-211ENST00000485399 CARD11Q9BXL7 1154 aa30.84■■■□□ 2.53
NECAB3-211ENST00000485399 SETD1AO15047 1707 aaKnown RBP30.81■■■□□ 2.52
NECAB3-211ENST00000485399 ADAMTS13Q76LX8 1427 aa30.81■■■□□ 2.52
NECAB3-211ENST00000485399 DIP2AQ14689 1571 aa30.8■■■□□ 2.52
NECAB3-211ENST00000485399 TBX22Q9Y458 520 aa30.79■■■□□ 2.52
NECAB3-211ENST00000485399 ADGRB1O14514 1584 aa30.78■■■□□ 2.52
NECAB3-211ENST00000485399 RGS17Q9UGC6 210 aaPredicted RBP30.78■■■□□ 2.52
NECAB3-211ENST00000485399 MSH6P52701 1360 aa30.76■■■□□ 2.52
NECAB3-211ENST00000485399 TMEM132EQ6IEE7 984 aa30.76■■■□□ 2.51
NECAB3-211ENST00000485399 EIF4G2P78344 907 aaKnown RBP eCLIP30.74■■■□□ 2.512e-6■■■■□ 22.4
NECAB3-211ENST00000485399 ASXL1Q8IXJ9 1541 aa30.74■■■□□ 2.51
NECAB3-211ENST00000485399 METP08581 1390 aa30.71■■■□□ 2.51
NECAB3-211ENST00000485399 USP47Q96K76 1375 aa30.71■■■□□ 2.51
NECAB3-211ENST00000485399 SLAIN2Q9P270 581 aa30.69■■■□□ 2.5
NECAB3-211ENST00000485399 YTHDC2Q9H6S0 1430 aaKnown RBP30.69■■■□□ 2.5
NECAB3-211ENST00000485399 NCOA3Q9Y6Q9 1424 aa30.69■■■□□ 2.5
NECAB3-211ENST00000485399 PHLPP1O60346 1717 aa30.68■■■□□ 2.5
NECAB3-211ENST00000485399 LRPPRCP42704 1394 aaKnown RBP30.67■■■□□ 2.5
NECAB3-211ENST00000485399 PIK3R4Q99570 1358 aa30.67■■■□□ 2.5
NECAB3-211ENST00000485399 HSPA5P11021 654 aaKnown RBP30.66■■■□□ 2.5
NECAB3-211ENST00000485399 EIF3AQ14152 1382 aaKnown RBP30.66■■■□□ 2.5
NECAB3-211ENST00000485399 TRAK1Q9UPV9 953 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms