RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 RPGRIP1LQ68CZ1 1315 aa25.46■■□□□ 1.67
NECTIN3-206ENST00000485303 TMC1Q8TDI8 760 aa25.45■■□□□ 1.66
NECTIN3-206ENST00000485303 EIF3AQ14152 1382 aaKnown RBP25.43■■□□□ 1.66
NECTIN3-206ENST00000485303 POGKQ9P215 609 aa25.43■■□□□ 1.66
NECTIN3-206ENST00000485303 ARHGAP31Q2M1Z3 1444 aa25.43■■□□□ 1.66
NECTIN3-206ENST00000485303 CLTCQ00610 1675 aaKnown RBP25.42■■□□□ 1.66
NECTIN3-206ENST00000485303 FAM9BQ8IZU0 186 aa25.42■■□□□ 1.66
NECTIN3-206ENST00000485303 MRS2Q9HD23 443 aa25.42■■□□□ 1.66
NECTIN3-206ENST00000485303 ERVK-7P63135 1459 aa25.4■■□□□ 1.66
NECTIN3-206ENST00000485303 CC2D1BQ5T0F9 858 aaKnown RBP25.4■■□□□ 1.66
NECTIN3-206ENST00000485303 AGLP35573 1532 aa25.4■■□□□ 1.66
NECTIN3-206ENST00000485303 DISP3Q9P2K9 1392 aa25.4■■□□□ 1.66
NECTIN3-206ENST00000485303 TNRQ92752 1358 aa25.39■■□□□ 1.65
NECTIN3-206ENST00000485303 C14orf93Q9H972 538 aaKnown RBP25.39■■□□□ 1.65
NECTIN3-206ENST00000485303 TESK2Q96S53 571 aa25.39■■□□□ 1.65
NECTIN3-206ENST00000485303 TRPM1Q7Z4N2 1603 aa25.38■■□□□ 1.65
NECTIN3-206ENST00000485303 GPRASP1Q5JY77 1395 aa25.38■■□□□ 1.65
NECTIN3-206ENST00000485303 CENPJQ9HC77 1338 aaPredicted RBP25.38■■□□□ 1.65
NECTIN3-206ENST00000485303 CDCA8Q53HL2 280 aa25.38■■□□□ 1.65
NECTIN3-206ENST00000485303 PANK3Q9H999 370 aa25.37■■□□□ 1.65
NECTIN3-206ENST00000485303 PRKRIP1Q9H875 184 aaPredicted RBP25.37■■□□□ 1.65
NECTIN3-206ENST00000485303 SYNMO15061 1565 aa25.37■■□□□ 1.65
NECTIN3-206ENST00000485303 SENP3-EIF4A1A0A087X0R7 540 aa25.36■■□□□ 1.65
NECTIN3-206ENST00000485303 SCAF11Q99590 1463 aaKnown RBP25.36■■□□□ 1.65
NECTIN3-206ENST00000485303 SIGLEC1Q9BZZ2 1709 aa25.35■■□□□ 1.65
NECTIN3-206ENST00000485303 MROH2AA6NES4 1674 aa25.35■■□□□ 1.65
NECTIN3-206ENST00000485303 HDGFP51858 240 aaKnown RBP25.34■■□□□ 1.65
NECTIN3-206ENST00000485303 ADGRB3O60242 1522 aa25.34■■□□□ 1.65
NECTIN3-206ENST00000485303 MADDQ8WXG6 1647 aa25.33■■□□□ 1.65
NECTIN3-206ENST00000485303 BCORL1Q5H9F3 1711 aa25.33■■□□□ 1.65
NECTIN3-206ENST00000485303 MINK1Q8N4C8 1332 aaPredicted RBP25.33■■□□□ 1.64
NECTIN3-206ENST00000485303 ZC3H13Q5T200 1668 aaKnown RBP25.32■■□□□ 1.64
NECTIN3-206ENST00000485303 CCER2I3L3R5 266 aa25.31■■□□□ 1.64
NECTIN3-206ENST00000485303 SRPK2P78362 688 aaKnown RBP25.31■■□□□ 1.64
NECTIN3-206ENST00000485303 KNSTRNQ9Y448 316 aa25.31■■□□□ 1.64
NECTIN3-206ENST00000485303 TXNDC2Q86VQ3 553 aa25.3■■□□□ 1.64
NECTIN3-206ENST00000485303 CCDC184Q52MB2 194 aa25.29■■□□□ 1.64
NECTIN3-206ENST00000485303 EID1Q9Y6B2 187 aa25.29■■□□□ 1.64
NECTIN3-206ENST00000485303 PREX1Q8TCU6 1659 aa25.29■■□□□ 1.64
NECTIN3-206ENST00000485303 MYOM2P54296 1465 aa25.28■■□□□ 1.64
NECTIN3-206ENST00000485303 HNRNPUQ00839 825 aaKnown RBP eCLIP25.28■■□□□ 1.64
NECTIN3-206ENST00000485303 REREQ9P2R6 1566 aa25.28■■□□□ 1.64
NECTIN3-206ENST00000485303 RIMS2Q9UQ26 1411 aa25.28■■□□□ 1.64
NECTIN3-206ENST00000485303 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.27■■□□□ 1.64
NECTIN3-206ENST00000485303 PRAM1Q96QH2 718 aa25.27■■□□□ 1.64
NECTIN3-206ENST00000485303 SLC26A8Q96RN1 970 aa25.27■■□□□ 1.64
NECTIN3-206ENST00000485303 PIK3C2GO75747 1445 aa25.24■■□□□ 1.63
NECTIN3-206ENST00000485303 CABP2Q9NPB3 220 aa25.23■■□□□ 1.63
NECTIN3-206ENST00000485303 WAPLQ7Z5K2 1190 aa25.21■■□□□ 1.63
NECTIN3-206ENST00000485303 PIK3C2BO00750 1634 aa25.21■■□□□ 1.63
NECTIN3-206ENST00000485303 SLC24A1O60721 1099 aa25.19■■□□□ 1.62
NECTIN3-206ENST00000485303 KTN1Q86UP2 1357 aaKnown RBP25.19■■□□□ 1.62
NECTIN3-206ENST00000485303 TNNT2P45379 298 aaPredicted RBP25.18■■□□□ 1.62
NECTIN3-206ENST00000485303 A2ML1A8K2U0 1454 aa25.18■■□□□ 1.62
NECTIN3-206ENST00000485303 NUTM2FA1L443 756 aa25.18■■□□□ 1.62
NECTIN3-206ENST00000485303 SLC12A5Q9H2X9 1139 aa25.18■■□□□ 1.62
NECTIN3-206ENST00000485303 THEMISQ8N1K5 641 aaPredicted RBP25.17■■□□□ 1.62
NECTIN3-206ENST00000485303 EVC2Q86UK5 1308 aa25.17■■□□□ 1.62
NECTIN3-206ENST00000485303 NEXMIFQ5QGS0 1516 aa25.17■■□□□ 1.62
NECTIN3-206ENST00000485303 LTKP29376 864 aa25.15■■□□□ 1.62
NECTIN3-206ENST00000485303 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.62
NECTIN3-206ENST00000485303 SALL2Q9Y467 1007 aaPredicted RBP25.13■■□□□ 1.61
NECTIN3-206ENST00000485303 TMEM131LA2VDJ0 1609 aa25.12■■□□□ 1.61
NECTIN3-206ENST00000485303 SPATA31D1Q6ZQQ2 1576 aa25.12■■□□□ 1.61
NECTIN3-206ENST00000485303 PPLO60437 1756 aa25.12■■□□□ 1.61
NECTIN3-206ENST00000485303 GTF3C3Q9Y5Q9 886 aa25.11■■□□□ 1.61
NECTIN3-206ENST00000485303 TMEM2Q9UHN6 1383 aa25.11■■□□□ 1.61
NECTIN3-206ENST00000485303 RALBP1Q15311 655 aa25.09■■□□□ 1.61
NECTIN3-206ENST00000485303 YTHDC2Q9H6S0 1430 aaKnown RBP25.09■■□□□ 1.61
NECTIN3-206ENST00000485303 NRXN1Q9ULB1 1477 aa25.08■■□□□ 1.61
NECTIN3-206ENST00000485303 NEURL4Q96JN8 1562 aa25.07■■□□□ 1.6
NECTIN3-206ENST00000485303 MYBBP1AQ9BQG0 1328 aaKnown RBP25.06■■□□□ 1.6
NECTIN3-206ENST00000485303 CDK19Q9BWU1 502 aa25.05■■□□□ 1.6
NECTIN3-206ENST00000485303 LAMC1P11047 1609 aa25.04■■□□□ 1.6
NECTIN3-206ENST00000485303 PER1O15534 1290 aaPredicted RBP25.04■■□□□ 1.6
NECTIN3-206ENST00000485303 METP08581 1390 aa25.03■■□□□ 1.6
NECTIN3-206ENST00000485303 ZFYVE9O95405 1425 aa25.03■■□□□ 1.6
NECTIN3-206ENST00000485303 IFT172Q9UG01 1749 aa25.03■■□□□ 1.6
NECTIN3-206ENST00000485303 IQGAP1P46940 1657 aa25.02■■□□□ 1.6
NECTIN3-206ENST00000485303 FER1L4A9Z1Z3 1794 aa25.02■■□□□ 1.6
NECTIN3-206ENST00000485303 NLRP13Q86W25 1043 aa25.01■■□□□ 1.59
NECTIN3-206ENST00000485303 C14orf37Q86TY3 774 aa25■■□□□ 1.59
NECTIN3-206ENST00000485303 MORC1Q86VD1 984 aa25■■□□□ 1.59
NECTIN3-206ENST00000485303 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
NECTIN3-206ENST00000485303 PLEKHH1Q9ULM0 1364 aa25■■□□□ 1.59
NECTIN3-206ENST00000485303 ANKLE2Q86XL3 938 aa24.99■■□□□ 1.59
NECTIN3-206ENST00000485303 ADGRB1O14514 1584 aa24.98■■□□□ 1.59
NECTIN3-206ENST00000485303 KIAA1210Q9ULL0 1709 aa24.98■■□□□ 1.59
NECTIN3-206ENST00000485303 NLRP1Q9C000 1473 aa24.98■■□□□ 1.59
NECTIN3-206ENST00000485303 ALKQ9UM73 1620 aa24.98■■□□□ 1.59
NECTIN3-206ENST00000485303 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.97■■□□□ 1.59
NECTIN3-206ENST00000485303 CABP1Q9NZU7 370 aa24.97■■□□□ 1.59
NECTIN3-206ENST00000485303 AMOTL2Q9Y2J4 779 aa24.97■■□□□ 1.59
NECTIN3-206ENST00000485303 POLR1AO95602 1720 aaPredicted RBP24.97■■□□□ 1.59
NECTIN3-206ENST00000485303 SCAF1Q9H7N4 1312 aaKnown RBP24.97■■□□□ 1.59
NECTIN3-206ENST00000485303 CARD14Q9BXL6 1004 aa24.96■■□□□ 1.59
NECTIN3-206ENST00000485303 RIMS1Q86UR5 1692 aaKnown RBP24.96■■□□□ 1.59
NECTIN3-206ENST00000485303 HDGFL2Q7Z4V5 671 aaPredicted RBP24.95■■□□□ 1.58
NECTIN3-206ENST00000485303 SETBP1Q9Y6X0 1596 aa24.95■■□□□ 1.58
NECTIN3-206ENST00000485303 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms