RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 RGL3Q3MIN7 710 aa29.57■■■□□ 2.32
PKD1-218ENST00000485120 RIMS2Q9UQ26 1411 aa29.55■■■□□ 2.32
PKD1-218ENST00000485120 VGFO15240 615 aaPredicted RBP29.55■■■□□ 2.32
PKD1-218ENST00000485120 ZFYVE9O95405 1425 aa29.54■■■□□ 2.32
PKD1-218ENST00000485120 LTKP29376 864 aa29.54■■■□□ 2.32
PKD1-218ENST00000485120 NEUROD1Q13562 356 aa29.54■■■□□ 2.32
PKD1-218ENST00000485120 KIF1BO60333 1816 aa29.53■■■□□ 2.32
PKD1-218ENST00000485120 DMRT2Q9Y5R5 561 aa29.53■■■□□ 2.32
PKD1-218ENST00000485120 SCAF11Q99590 1463 aaKnown RBP29.5■■■□□ 2.31
PKD1-218ENST00000485120 PPP1R15AO75807 674 aaPredicted RBP29.5■■■□□ 2.31
PKD1-218ENST00000485120 TIMELESSQ9UNS1 1208 aa29.5■■■□□ 2.31
PKD1-218ENST00000485120 NCKAP5LQ9HCH0 1330 aa29.49■■■□□ 2.31
PKD1-218ENST00000485120 MED14O60244 1454 aa29.47■■■□□ 2.31
PKD1-218ENST00000485120 PLEKHG1Q9ULL1 1385 aa29.44■■■□□ 2.3
PKD1-218ENST00000485120 DCAF11Q8TEB1 546 aa29.43■■■□□ 2.3
PKD1-218ENST00000485120 NEXMIFQ5QGS0 1516 aa29.43■■■□□ 2.3
PKD1-218ENST00000485120 L3MBTL2Q969R5 705 aa29.42■■■□□ 2.3
PKD1-218ENST00000485120 NPHP4O75161 1426 aaPredicted RBP29.41■■■□□ 2.3
PKD1-218ENST00000485120 TONSLQ96HA7 1378 aa29.4■■■□□ 2.3
PKD1-218ENST00000485120 NUTM2DQ5VT03 806 aaPredicted RBP29.4■■■□□ 2.3
PKD1-218ENST00000485120 MYOM2P54296 1465 aa29.37■■■□□ 2.29
PKD1-218ENST00000485120 MYO5BQ9ULV0 1848 aa29.37■■■□□ 2.29
PKD1-218ENST00000485120 BCANQ96GW7 911 aa29.37■■■□□ 2.29
PKD1-218ENST00000485120 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
PKD1-218ENST00000485120 ADGRF5Q8IZF2 1346 aa29.36■■■□□ 2.29
PKD1-218ENST00000485120 KDM2AQ9Y2K7 1162 aa29.35■■■□□ 2.29
PKD1-218ENST00000485120 STRCQ7RTU9 1775 aa29.33■■■□□ 2.29
PKD1-218ENST00000485120 NRXN1Q9ULB1 1477 aa29.32■■■□□ 2.28
PKD1-218ENST00000485120 PPLO60437 1756 aa29.3■■■□□ 2.28
PKD1-218ENST00000485120 POLR1AO95602 1720 aaPredicted RBP29.29■■■□□ 2.28
PKD1-218ENST00000485120 PIK3C2GO75747 1445 aa29.28■■■□□ 2.28
PKD1-218ENST00000485120 SETBP1Q9Y6X0 1596 aa29.28■■■□□ 2.28
PKD1-218ENST00000485120 SLC26A8Q96RN1 970 aa29.28■■■□□ 2.28
PKD1-218ENST00000485120 C14orf93Q9H972 538 aaKnown RBP29.28■■■□□ 2.28
PKD1-218ENST00000485120 ADAMTS13Q76LX8 1427 aa29.27■■■□□ 2.28
PKD1-218ENST00000485120 PIK3R4Q99570 1358 aa29.26■■■□□ 2.27
PKD1-218ENST00000485120 IFT172Q9UG01 1749 aa29.25■■■□□ 2.27
PKD1-218ENST00000485120 IQGAP1P46940 1657 aa29.25■■■□□ 2.27
PKD1-218ENST00000485120 DIP2AQ14689 1571 aa29.22■■■□□ 2.27
PKD1-218ENST00000485120 PRAG1Q86YV5 1406 aa29.22■■■□□ 2.27
PKD1-218ENST00000485120 CFAP70Q5T0N1 1121 aa29.19■■■□□ 2.26
PKD1-218ENST00000485120 ALKQ9UM73 1620 aa29.17■■■□□ 2.26
PKD1-218ENST00000485120 KCNA6P17658 529 aa29.17■■■□□ 2.26
PKD1-218ENST00000485120 SENP3Q9H4L4 574 aaPredicted RBP29.17■■■□□ 2.26
PKD1-218ENST00000485120 NRXN3Q9Y4C0 1643 aa29.15■■■□□ 2.26
PKD1-218ENST00000485120 METP08581 1390 aa29.14■■■□□ 2.26
PKD1-218ENST00000485120 NBPF8Q3BBV2 869 aa29.12■■■□□ 2.25
PKD1-218ENST00000485120 AMOTL2Q9Y2J4 779 aa29.1■■■□□ 2.25
PKD1-218ENST00000485120 LAMC1P11047 1609 aa29.09■■■□□ 2.25
PKD1-218ENST00000485120 ZNF335Q9H4Z2 1342 aaPredicted RBP29.08■■■□□ 2.25
PKD1-218ENST00000485120 LRPPRCP42704 1394 aaKnown RBP29.07■■■□□ 2.24
PKD1-218ENST00000485120 TMEM132EQ6IEE7 984 aa29.07■■■□□ 2.24
PKD1-218ENST00000485120 SIRT1Q96EB6 747 aa29.07■■■□□ 2.24
PKD1-218ENST00000485120 ABCC11Q96J66 1382 aa29.07■■■□□ 2.24
PKD1-218ENST00000485120 PTPRUQ92729 1446 aa29.04■■■□□ 2.24
PKD1-218ENST00000485120 NBPF1Q3BBV0 1214 aa29.04■■■□□ 2.24
PKD1-218ENST00000485120 KIAA1210Q9ULL0 1709 aa29.03■■■□□ 2.24
PKD1-218ENST00000485120 YTHDC2Q9H6S0 1430 aaKnown RBP29.03■■■□□ 2.24
PKD1-218ENST00000485120 ZEB1P37275 1124 aaPredicted RBP29.02■■■□□ 2.24
PKD1-218ENST00000485120 ROCK2O75116 1388 aaKnown RBP29.01■■■□□ 2.24
PKD1-218ENST00000485120 GPRASP1Q5JY77 1395 aa29.01■■■□□ 2.24
PKD1-218ENST00000485120 ADGRB1O14514 1584 aa29.01■■■□□ 2.23
PKD1-218ENST00000485120 SETD1AO15047 1707 aaKnown RBP29■■■□□ 2.23
PKD1-218ENST00000485120 TECPR2O15040 1411 aa29■■■□□ 2.23
PKD1-218ENST00000485120 CPS1P31327 1500 aa28.99■■■□□ 2.23
PKD1-218ENST00000485120 NKTRP30414 1462 aaKnown RBP28.99■■■□□ 2.23
PKD1-218ENST00000485120 RALGAPBQ86X10 1494 aa28.99■■■□□ 2.23
PKD1-218ENST00000485120 NWD1Q149M9 1564 aa28.99■■■□□ 2.23
PKD1-218ENST00000485120 STK26Q9P289 416 aa28.98■■■□□ 2.23
PKD1-218ENST00000485120 PROSER2Q86WR7 435 aaPredicted RBP28.97■■■□□ 2.23
PKD1-218ENST00000485120 ASXL1Q8IXJ9 1541 aa28.97■■■□□ 2.23
PKD1-218ENST00000485120 PTCH1Q13635 1447 aa28.96■■■□□ 2.23
PKD1-218ENST00000485120 NCOA3Q9Y6Q9 1424 aa28.96■■■□□ 2.23
PKD1-218ENST00000485120 CARD11Q9BXL7 1154 aa28.96■■■□□ 2.23
PKD1-218ENST00000485120 FAM135BQ49AJ0 1406 aa28.94■■■□□ 2.22
PKD1-218ENST00000485120 CHD2O14647 1828 aaKnown RBP28.94■■■□□ 2.22
PKD1-218ENST00000485120 TRPM1Q7Z4N2 1603 aa28.94■■■□□ 2.22
PKD1-218ENST00000485120 LTBP4Q8N2S1 1624 aa28.94■■■□□ 2.22
PKD1-218ENST00000485120 TRAK1Q9UPV9 953 aa28.93■■■□□ 2.22
PKD1-218ENST00000485120 ROBO2Q9HCK4 1378 aa28.91■■■□□ 2.22
PKD1-218ENST00000485120 DLC1Q96QB1 1528 aa28.91■■■□□ 2.22
PKD1-218ENST00000485120 XRN1Q8IZH2 1706 aaKnown RBP28.91■■■□□ 2.22
PKD1-218ENST00000485120 LRRC7Q96NW7 1537 aa28.88■■■□□ 2.21
PKD1-218ENST00000485120 TMEM94Q12767 1356 aa28.88■■■□□ 2.21
PKD1-218ENST00000485120 POGKQ9P215 609 aa28.87■■■□□ 2.21
PKD1-218ENST00000485120 PRAM1Q96QH2 718 aa28.86■■■□□ 2.21
PKD1-218ENST00000485120 EIF3AQ14152 1382 aaKnown RBP28.86■■■□□ 2.21
PKD1-218ENST00000485120 WAPLQ7Z5K2 1190 aa28.84■■■□□ 2.21
PKD1-218ENST00000485120 CERKQ8TCT0 537 aa28.84■■■□□ 2.21
PKD1-218ENST00000485120 C19orf44Q9H6X5 657 aa28.83■■■□□ 2.21
PKD1-218ENST00000485120 STRCP1A6NGW2 1772 aa28.83■■■□□ 2.21
PKD1-218ENST00000485120 IQSEC2Q5JU85 1478 aa28.82■■■□□ 2.2
PKD1-218ENST00000485120 KNDC1Q76NI1 1749 aa28.82■■■□□ 2.2
PKD1-218ENST00000485120 SLC24A1O60721 1099 aa28.81■■■□□ 2.2
PKD1-218ENST00000485120 CENPJQ9HC77 1338 aaPredicted RBP28.8■■■□□ 2.2
PKD1-218ENST00000485120 C14orf37Q86TY3 774 aa28.8■■■□□ 2.2
PKD1-218ENST00000485120 MSH6P52701 1360 aa28.77■■■□□ 2.2
PKD1-218ENST00000485120 PLEKHH1Q9ULM0 1364 aa28.77■■■□□ 2.2
PKD1-218ENST00000485120 RBM33Q96EV2 1170 aaKnown RBP28.77■■■□□ 2.2
PKD1-218ENST00000485120 ADGRL3Q9HAR2 1447 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms