RNA–Protein interactions for RNA: ENST00000484048.1

UBE2E1-209, Transcript of ubiquitin conjugating enzyme E2 E1, humanhuman

TSL 3

Gene UBE2E1, Length 786 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E1-209ENST00000484048 NLRP1Q9C000 1473 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 UGGT1Q9NYU2 1555 aa23.61■■□□□ 1.37
UBE2E1-209ENST00000484048 ARHGAP31Q2M1Z3 1444 aa23.59■■□□□ 1.37
UBE2E1-209ENST00000484048 STRCP1A6NGW2 1772 aa23.58■■□□□ 1.37
UBE2E1-209ENST00000484048 TRPM2O94759 1503 aa23.54■■□□□ 1.36
UBE2E1-209ENST00000484048 CLTCL1P53675 1640 aa23.5■■□□□ 1.35
UBE2E1-209ENST00000484048 KIF1BO60333 1816 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 SIN3AQ96ST3 1273 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 NOS1P29475 1434 aa23.49■■□□□ 1.35
UBE2E1-209ENST00000484048 PIK3C2BO00750 1634 aa23.48■■□□□ 1.35
UBE2E1-209ENST00000484048 SETD1AO15047 1707 aaKnown RBP23.47■■□□□ 1.35
UBE2E1-209ENST00000484048 FAM135BQ49AJ0 1406 aa23.47■■□□□ 1.35
UBE2E1-209ENST00000484048 ERVK-7P63135 1459 aa23.46■■□□□ 1.35
UBE2E1-209ENST00000484048 CCDC144AA2RUR9 1427 aa23.44■■□□□ 1.34
UBE2E1-209ENST00000484048 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
UBE2E1-209ENST00000484048 NEUROD1Q13562 356 aa23.42■■□□□ 1.34
UBE2E1-209ENST00000484048 MYO5BQ9ULV0 1848 aa23.4■■□□□ 1.34
UBE2E1-209ENST00000484048 SCAF11Q99590 1463 aaKnown RBP23.38■■□□□ 1.33
UBE2E1-209ENST00000484048 XIRP1Q702N8 1843 aaKnown RBP23.36■■□□□ 1.33
UBE2E1-209ENST00000484048 TIMELESSQ9UNS1 1208 aa23.35■■□□□ 1.33
UBE2E1-209ENST00000484048 UPF1Q92900 1129 aaKnown RBP eCLIP23.34■■□□□ 1.33
UBE2E1-209ENST00000484048 TONSLQ96HA7 1378 aa23.34■■□□□ 1.33
UBE2E1-209ENST00000484048 ADGRB3O60242 1522 aa23.33■■□□□ 1.32
UBE2E1-209ENST00000484048 SPATA31E1Q6ZUB1 1445 aa23.33■■□□□ 1.32
UBE2E1-209ENST00000484048 ROBO1Q9Y6N7 1651 aa23.32■■□□□ 1.32
UBE2E1-209ENST00000484048 IFT172Q9UG01 1749 aa23.32■■□□□ 1.32
UBE2E1-209ENST00000484048 TMEM131LA2VDJ0 1609 aa23.31■■□□□ 1.32
UBE2E1-209ENST00000484048 KDM5AP29375 1690 aaKnown RBP23.31■■□□□ 1.32
UBE2E1-209ENST00000484048 SLC52A1Q9NWF4 448 aa23.3■■□□□ 1.32
UBE2E1-209ENST00000484048 TMEM94Q12767 1356 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 LTKP29376 864 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 UBR1Q8IWV7 1749 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
UBE2E1-209ENST00000484048 PPLO60437 1756 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 TXNDC2Q86VQ3 553 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 SLIT1O75093 1534 aa23.28■■□□□ 1.32
UBE2E1-209ENST00000484048 IDI1Q13907 227 aa23.27■■□□□ 1.32
UBE2E1-209ENST00000484048 JCADQ9P266 1359 aa23.26■■□□□ 1.31
UBE2E1-209ENST00000484048 L3MBTL2Q969R5 705 aa23.25■■□□□ 1.31
UBE2E1-209ENST00000484048 EID1Q9Y6B2 187 aa23.22■■□□□ 1.31
UBE2E1-209ENST00000484048 RGL3Q3MIN7 710 aa23.2■■□□□ 1.3
UBE2E1-209ENST00000484048 PPP1R15AO75807 674 aaPredicted RBP23.19■■□□□ 1.3
UBE2E1-209ENST00000484048 ZNF772Q68DY9 489 aaPredicted RBP23.19■■□□□ 1.3
UBE2E1-209ENST00000484048 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 CHGAP10645 457 aaKnown RBP23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 PHLPP1O60346 1717 aa23.18■■□□□ 1.3
UBE2E1-209ENST00000484048 KCNA6P17658 529 aa23.17■■□□□ 1.3
UBE2E1-209ENST00000484048 LRP6O75581 1613 aa23.16■■□□□ 1.3
UBE2E1-209ENST00000484048 PROSER2Q86WR7 435 aaPredicted RBP23.16■■□□□ 1.3
UBE2E1-209ENST00000484048 RBM33Q96EV2 1170 aaKnown RBP23.15■■□□□ 1.3
UBE2E1-209ENST00000484048 MYOM2P54296 1465 aa23.15■■□□□ 1.3
UBE2E1-209ENST00000484048 TMEM2Q9UHN6 1383 aa23.14■■□□□ 1.3
UBE2E1-209ENST00000484048 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 DCAF11Q8TEB1 546 aa23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 MSH6P52701 1360 aa23.14■■□□□ 1.29
UBE2E1-209ENST00000484048 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 RPGRIP1LQ68CZ1 1315 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 SLAIN2Q9P270 581 aa23.13■■□□□ 1.29
UBE2E1-209ENST00000484048 NKTRP30414 1462 aaKnown RBP23.12■■□□□ 1.29
UBE2E1-209ENST00000484048 COL16A1Q07092 1604 aaPredicted RBP23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 ZNF326Q5BKZ1 582 aaKnown RBP23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 STAC3Q96MF2 364 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 STAG3Q9UJ98 1225 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 KIAA1210Q9ULL0 1709 aa23.11■■□□□ 1.29
UBE2E1-209ENST00000484048 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
UBE2E1-209ENST00000484048 RXRBP28702 533 aa23.1■■□□□ 1.29
UBE2E1-209ENST00000484048 KDM2AQ9Y2K7 1162 aa23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 CDK12Q9NYV4 1490 aaPredicted RBP23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 NRXN1Q9ULB1 1477 aa23.09■■□□□ 1.29
UBE2E1-209ENST00000484048 SLC26A8Q96RN1 970 aa23.08■■□□□ 1.29
UBE2E1-209ENST00000484048 NWD1Q149M9 1564 aa23.08■■□□□ 1.29
UBE2E1-209ENST00000484048 NBPF8Q3BBV2 869 aa23.07■■□□□ 1.28
UBE2E1-209ENST00000484048 ZFYVE9O95405 1425 aa23.07■■□□□ 1.28
UBE2E1-209ENST00000484048 SRCAPQ6ZRS2 3230 aa23.05■■□□□ 1.28
UBE2E1-209ENST00000484048 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
UBE2E1-209ENST00000484048 LAMC1P11047 1609 aa23.03■■□□□ 1.28
UBE2E1-209ENST00000484048 RALGAPBQ86X10 1494 aa23.03■■□□□ 1.28
UBE2E1-209ENST00000484048 ADGRF5Q8IZF2 1346 aa23.02■■□□□ 1.28
UBE2E1-209ENST00000484048 PIK3C2GO75747 1445 aa23.01■■□□□ 1.27
UBE2E1-209ENST00000484048 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
UBE2E1-209ENST00000484048 SHPRHQ149N8 1683 aa22.99■■□□□ 1.27
UBE2E1-209ENST00000484048 NRXN3Q9Y4C0 1643 aa22.98■■□□□ 1.27
UBE2E1-209ENST00000484048 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.98■■□□□ 1.27
UBE2E1-209ENST00000484048 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
UBE2E1-209ENST00000484048 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
UBE2E1-209ENST00000484048 HDGFP51858 240 aaKnown RBP22.95■■□□□ 1.26
UBE2E1-209ENST00000484048 SETBP1Q9Y6X0 1596 aa22.95■■□□□ 1.26
UBE2E1-209ENST00000484048 RGS12O14924 1447 aa22.93■■□□□ 1.26
UBE2E1-209ENST00000484048 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
UBE2E1-209ENST00000484048 BCANQ96GW7 911 aa22.92■■□□□ 1.26
UBE2E1-209ENST00000484048 AFF2P51816 1311 aa22.91■■□□□ 1.26
UBE2E1-209ENST00000484048 NCOA3Q9Y6Q9 1424 aa22.91■■□□□ 1.26
UBE2E1-209ENST00000484048 ROCK2O75116 1388 aaKnown RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2BA6NNL0 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2EB1AL46 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 NUTM2AQ8IVF1 878 aaPredicted RBP22.9■■□□□ 1.26
UBE2E1-209ENST00000484048 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.26
UBE2E1-209ENST00000484048 C14orf93Q9H972 538 aaKnown RBP22.89■■□□□ 1.25
UBE2E1-209ENST00000484048 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms