RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 LTKP29376 864 aa20.38■□□□□ 0.85
SRSF6-202ENST00000483871 NEURL4Q96JN8 1562 aa20.38■□□□□ 0.85
SRSF6-202ENST00000483871 RIMS2Q9UQ26 1411 aa20.38■□□□□ 0.85
SRSF6-202ENST00000483871 TXNDC2Q86VQ3 553 aa20.37■□□□□ 0.85
SRSF6-202ENST00000483871 RPGRIP1LQ68CZ1 1315 aa20.36■□□□□ 0.85
SRSF6-202ENST00000483871 NEXMIFQ5QGS0 1516 aa20.36■□□□□ 0.85
SRSF6-202ENST00000483871 ZFYVE9O95405 1425 aa20.36■□□□□ 0.85
SRSF6-202ENST00000483871 ADGRF5Q8IZF2 1346 aa20.35■□□□□ 0.85
SRSF6-202ENST00000483871 ARHGAP23Q9P227 1491 aa20.34■□□□□ 0.85
SRSF6-202ENST00000483871 SLIT1O75093 1534 aa20.34■□□□□ 0.85
SRSF6-202ENST00000483871 NCKAP5LQ9HCH0 1330 aa20.33■□□□□ 0.85
SRSF6-202ENST00000483871 TIMELESSQ9UNS1 1208 aa20.33■□□□□ 0.85
SRSF6-202ENST00000483871 EID1Q9Y6B2 187 aa20.33■□□□□ 0.85
SRSF6-202ENST00000483871 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
SRSF6-202ENST00000483871 PPP1R15AO75807 674 aaPredicted RBP20.32■□□□□ 0.84
SRSF6-202ENST00000483871 HDGFP51858 240 aaKnown RBP20.32■□□□□ 0.84
SRSF6-202ENST00000483871 ANKLE2Q86XL3 938 aa20.32■□□□□ 0.84
SRSF6-202ENST00000483871 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
SRSF6-202ENST00000483871 PPLO60437 1756 aa20.32■□□□□ 0.84
SRSF6-202ENST00000483871 IFT172Q9UG01 1749 aa20.31■□□□□ 0.84
SRSF6-202ENST00000483871 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
SRSF6-202ENST00000483871 SCAF11Q99590 1463 aaKnown RBP20.28■□□□□ 0.84
SRSF6-202ENST00000483871 BCANQ96GW7 911 aa20.28■□□□□ 0.84
SRSF6-202ENST00000483871 STAC3Q96MF2 364 aa20.27■□□□□ 0.84
SRSF6-202ENST00000483871 MYOM2P54296 1465 aa20.25■□□□□ 0.83
SRSF6-202ENST00000483871 CFAP70Q5T0N1 1121 aa20.24■□□□□ 0.83
SRSF6-202ENST00000483871 PLEKHG1Q9ULL1 1385 aa20.24■□□□□ 0.83
SRSF6-202ENST00000483871 PRAG1Q86YV5 1406 aa20.23■□□□□ 0.83
SRSF6-202ENST00000483871 NRXN1Q9ULB1 1477 aa20.23■□□□□ 0.83
SRSF6-202ENST00000483871 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
SRSF6-202ENST00000483871 STRCQ7RTU9 1775 aa20.23■□□□□ 0.83
SRSF6-202ENST00000483871 PIK3C2GO75747 1445 aa20.22■□□□□ 0.83
SRSF6-202ENST00000483871 POLR1AO95602 1720 aaPredicted RBP20.21■□□□□ 0.83
SRSF6-202ENST00000483871 C14orf93Q9H972 538 aaKnown RBP20.2■□□□□ 0.82
SRSF6-202ENST00000483871 NPHP4O75161 1426 aaPredicted RBP20.2■□□□□ 0.82
SRSF6-202ENST00000483871 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
SRSF6-202ENST00000483871 MED14O60244 1454 aa20.19■□□□□ 0.82
SRSF6-202ENST00000483871 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
SRSF6-202ENST00000483871 NRXN3Q9Y4C0 1643 aa20.19■□□□□ 0.82
SRSF6-202ENST00000483871 ZEB1P37275 1124 aaPredicted RBP20.18■□□□□ 0.82
SRSF6-202ENST00000483871 TMEM132EQ6IEE7 984 aa20.18■□□□□ 0.82
SRSF6-202ENST00000483871 IQGAP1P46940 1657 aa20.18■□□□□ 0.82
SRSF6-202ENST00000483871 ALKQ9UM73 1620 aa20.16■□□□□ 0.82
SRSF6-202ENST00000483871 SETBP1Q9Y6X0 1596 aa20.16■□□□□ 0.82
SRSF6-202ENST00000483871 TBX22Q9Y458 520 aa20.15■□□□□ 0.82
SRSF6-202ENST00000483871 METP08581 1390 aa20.14■□□□□ 0.82
SRSF6-202ENST00000483871 TRPM1Q7Z4N2 1603 aa20.13■□□□□ 0.81
SRSF6-202ENST00000483871 ROCK2O75116 1388 aaKnown RBP20.11■□□□□ 0.81
SRSF6-202ENST00000483871 SETD1AO15047 1707 aaKnown RBP20.11■□□□□ 0.81
SRSF6-202ENST00000483871 STK26Q9P289 416 aa20.1■□□□□ 0.81
SRSF6-202ENST00000483871 DMRT2Q9Y5R5 561 aa20.1■□□□□ 0.81
SRSF6-202ENST00000483871 ASXL1Q8IXJ9 1541 aa20.09■□□□□ 0.81
SRSF6-202ENST00000483871 RALGAPBQ86X10 1494 aa20.09■□□□□ 0.81
SRSF6-202ENST00000483871 CARD11Q9BXL7 1154 aa20.09■□□□□ 0.81
SRSF6-202ENST00000483871 KIAA1210Q9ULL0 1709 aa20.08■□□□□ 0.81
SRSF6-202ENST00000483871 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
SRSF6-202ENST00000483871 ADGRB1O14514 1584 aa20.08■□□□□ 0.8
SRSF6-202ENST00000483871 LAMC1P11047 1609 aa20.07■□□□□ 0.8
SRSF6-202ENST00000483871 TRAK1Q9UPV9 953 aa20.07■□□□□ 0.8
SRSF6-202ENST00000483871 DIP2AQ14689 1571 aa20.06■□□□□ 0.8
SRSF6-202ENST00000483871 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
SRSF6-202ENST00000483871 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
SRSF6-202ENST00000483871 YTHDC2Q9H6S0 1430 aaKnown RBP20.04■□□□□ 0.8
SRSF6-202ENST00000483871 KCNA6P17658 529 aa20.03■□□□□ 0.8
SRSF6-202ENST00000483871 ZNF335Q9H4Z2 1342 aaPredicted RBP20.03■□□□□ 0.8
SRSF6-202ENST00000483871 PIK3R4Q99570 1358 aa20.02■□□□□ 0.8
SRSF6-202ENST00000483871 CHD2O14647 1828 aaKnown RBP20.01■□□□□ 0.79
SRSF6-202ENST00000483871 LRPPRCP42704 1394 aaKnown RBP20.01■□□□□ 0.79
SRSF6-202ENST00000483871 ABCC11Q96J66 1382 aa20■□□□□ 0.79
SRSF6-202ENST00000483871 WAPLQ7Z5K2 1190 aa19.99■□□□□ 0.79
SRSF6-202ENST00000483871 RBM33Q96EV2 1170 aaKnown RBP19.99■□□□□ 0.79
SRSF6-202ENST00000483871 ROBO2Q9HCK4 1378 aa19.98■□□□□ 0.79
SRSF6-202ENST00000483871 SAFB2Q14151 953 aaKnown RBP eCLIP19.97■□□□□ 0.79
SRSF6-202ENST00000483871 HIRIP3Q9BW71 556 aaPredicted RBP19.97■□□□□ 0.79
SRSF6-202ENST00000483871 STRCP1A6NGW2 1772 aa19.97■□□□□ 0.79
SRSF6-202ENST00000483871 PRAM1Q96QH2 718 aa19.96■□□□□ 0.79
SRSF6-202ENST00000483871 USP47Q96K76 1375 aa19.95■□□□□ 0.78
SRSF6-202ENST00000483871 PLEKHH1Q9ULM0 1364 aa19.95■□□□□ 0.78
SRSF6-202ENST00000483871 XRN1Q8IZH2 1706 aaKnown RBP19.94■□□□□ 0.78
SRSF6-202ENST00000483871 ST20-MTHFSA0A0A6YYL1 179 aa19.94■□□□□ 0.78
SRSF6-202ENST00000483871 HSPA5P11021 654 aaKnown RBP19.94■□□□□ 0.78
SRSF6-202ENST00000483871 EIF4G2P78344 907 aaKnown RBP eCLIP19.94■□□□□ 0.78
SRSF6-202ENST00000483871 POGKQ9P215 609 aa19.94■□□□□ 0.78
SRSF6-202ENST00000483871 TECPR2O15040 1411 aa19.93■□□□□ 0.78
SRSF6-202ENST00000483871 PROSER2Q86WR7 435 aaPredicted RBP19.93■□□□□ 0.78
SRSF6-202ENST00000483871 NWD1Q149M9 1564 aa19.92■□□□□ 0.78
SRSF6-202ENST00000483871 SIRT1Q96EB6 747 aa19.92■□□□□ 0.78
SRSF6-202ENST00000483871 ARHGEF28Q8N1W1 1705 aaKnown RBP19.92■□□□□ 0.78
SRSF6-202ENST00000483871 KNDC1Q76NI1 1749 aa19.91■□□□□ 0.78
SRSF6-202ENST00000483871 CENPJQ9HC77 1338 aaPredicted RBP19.9■□□□□ 0.78
SRSF6-202ENST00000483871 PTCH1Q13635 1447 aa19.9■□□□□ 0.78
SRSF6-202ENST00000483871 CPS1P31327 1500 aa19.9■□□□□ 0.78
SRSF6-202ENST00000483871 DLC1Q96QB1 1528 aa19.9■□□□□ 0.78
SRSF6-202ENST00000483871 FAM135BQ49AJ0 1406 aa19.89■□□□□ 0.77
SRSF6-202ENST00000483871 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
SRSF6-202ENST00000483871 MINK1Q8N4C8 1332 aaPredicted RBP19.88■□□□□ 0.77
SRSF6-202ENST00000483871 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
SRSF6-202ENST00000483871 TMEM94Q12767 1356 aa19.86■□□□□ 0.77
SRSF6-202ENST00000483871 TESK2Q96S53 571 aa19.86■□□□□ 0.77
SRSF6-202ENST00000483871 LRRC7Q96NW7 1537 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms