RNA–Protein interactions for RNA: ENST00000481296.1

KDM4A-204, Transcript of lysine demethylase 4A, humanhuman

TSL 2

Gene KDM4A, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-204ENST00000481296 SETD1AO15047 1707 aaKnown RBP13.88□□□□□ -0.19
KDM4A-204ENST00000481296 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
KDM4A-204ENST00000481296 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
KDM4A-204ENST00000481296 NRXN3Q9Y4C0 1643 aa13.86□□□□□ -0.19
KDM4A-204ENST00000481296 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
KDM4A-204ENST00000481296 RGL3Q3MIN7 710 aa13.85□□□□□ -0.19
KDM4A-204ENST00000481296 ZNF326Q5BKZ1 582 aaKnown RBP13.85□□□□□ -0.19
KDM4A-204ENST00000481296 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
KDM4A-204ENST00000481296 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
KDM4A-204ENST00000481296 SETBP1Q9Y6X0 1596 aa13.83□□□□□ -0.19
KDM4A-204ENST00000481296 STRCQ7RTU9 1775 aa13.83□□□□□ -0.19
KDM4A-204ENST00000481296 SCAF11Q99590 1463 aaKnown RBP13.83□□□□□ -0.2
KDM4A-204ENST00000481296 L3MBTL2Q969R5 705 aa13.82□□□□□ -0.2
KDM4A-204ENST00000481296 TIMELESSQ9UNS1 1208 aa13.82□□□□□ -0.2
KDM4A-204ENST00000481296 DIP2AQ14689 1571 aa13.82□□□□□ -0.2
KDM4A-204ENST00000481296 RPGRIP1LQ68CZ1 1315 aa13.82□□□□□ -0.2
KDM4A-204ENST00000481296 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
KDM4A-204ENST00000481296 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
KDM4A-204ENST00000481296 THEMISQ8N1K5 641 aaPredicted RBP13.8□□□□□ -0.2
KDM4A-204ENST00000481296 RALGAPBQ86X10 1494 aa13.8□□□□□ -0.2
KDM4A-204ENST00000481296 KNDC1Q76NI1 1749 aa13.79□□□□□ -0.2
KDM4A-204ENST00000481296 ZEB1P37275 1124 aaPredicted RBP13.79□□□□□ -0.2
KDM4A-204ENST00000481296 DCAF11Q8TEB1 546 aa13.79□□□□□ -0.2
KDM4A-204ENST00000481296 ALKQ9UM73 1620 aa13.79□□□□□ -0.2
KDM4A-204ENST00000481296 PPP1R15AO75807 674 aaPredicted RBP13.77□□□□□ -0.21
KDM4A-204ENST00000481296 ASXL1Q8IXJ9 1541 aa13.77□□□□□ -0.21
KDM4A-204ENST00000481296 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
KDM4A-204ENST00000481296 KDM2AQ9Y2K7 1162 aa13.77□□□□□ -0.21
KDM4A-204ENST00000481296 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
KDM4A-204ENST00000481296 MED14O60244 1454 aa13.76□□□□□ -0.21
KDM4A-204ENST00000481296 PLEKHG1Q9ULL1 1385 aa13.76□□□□□ -0.21
KDM4A-204ENST00000481296 NUTM2DQ5VT03 806 aaPredicted RBP13.76□□□□□ -0.21
KDM4A-204ENST00000481296 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
KDM4A-204ENST00000481296 VGFO15240 615 aaPredicted RBP13.75□□□□□ -0.21
KDM4A-204ENST00000481296 STAC3Q96MF2 364 aa13.75□□□□□ -0.21
KDM4A-204ENST00000481296 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
KDM4A-204ENST00000481296 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
KDM4A-204ENST00000481296 CHD2O14647 1828 aaKnown RBP13.74□□□□□ -0.21
KDM4A-204ENST00000481296 HDGFP51858 240 aaKnown RBP13.74□□□□□ -0.21
KDM4A-204ENST00000481296 ADGRB1O14514 1584 aa13.74□□□□□ -0.21
KDM4A-204ENST00000481296 XRN1Q8IZH2 1706 aaKnown RBP13.73□□□□□ -0.21
KDM4A-204ENST00000481296 HSPA2P54652 639 aa13.73□□□□□ -0.21
KDM4A-204ENST00000481296 TXNDC2Q86VQ3 553 aa13.73□□□□□ -0.21
KDM4A-204ENST00000481296 LTKP29376 864 aa13.72□□□□□ -0.21
KDM4A-204ENST00000481296 ANKLE2Q86XL3 938 aa13.72□□□□□ -0.21
KDM4A-204ENST00000481296 ADAMTS13Q76LX8 1427 aa13.72□□□□□ -0.21
KDM4A-204ENST00000481296 NWD1Q149M9 1564 aa13.71□□□□□ -0.21
KDM4A-204ENST00000481296 NBPF8Q3BBV2 869 aa13.71□□□□□ -0.21
KDM4A-204ENST00000481296 QRICH2Q9H0J4 1663 aa13.71□□□□□ -0.21
KDM4A-204ENST00000481296 AEBP2Q6ZN18 517 aaPredicted RBP13.7□□□□□ -0.22
KDM4A-204ENST00000481296 ROCK2O75116 1388 aaKnown RBP13.7□□□□□ -0.22
KDM4A-204ENST00000481296 CPS1P31327 1500 aa13.69□□□□□ -0.22
KDM4A-204ENST00000481296 STRCP1A6NGW2 1772 aa13.69□□□□□ -0.22
KDM4A-204ENST00000481296 SENP3Q9H4L4 574 aaPredicted RBP13.69□□□□□ -0.22
KDM4A-204ENST00000481296 NCKAP5LQ9HCH0 1330 aa13.68□□□□□ -0.22
KDM4A-204ENST00000481296 BCANQ96GW7 911 aa13.68□□□□□ -0.22
KDM4A-204ENST00000481296 GPRASP1Q5JY77 1395 aa13.68□□□□□ -0.22
KDM4A-204ENST00000481296 CFAP70Q5T0N1 1121 aa13.66□□□□□ -0.22
KDM4A-204ENST00000481296 DLC1Q96QB1 1528 aa13.65□□□□□ -0.22
KDM4A-204ENST00000481296 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
KDM4A-204ENST00000481296 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
KDM4A-204ENST00000481296 NALCNQ8IZF0 1738 aa13.64□□□□□ -0.23
KDM4A-204ENST00000481296 METP08581 1390 aa13.63□□□□□ -0.23
KDM4A-204ENST00000481296 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
KDM4A-204ENST00000481296 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
KDM4A-204ENST00000481296 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
KDM4A-204ENST00000481296 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
KDM4A-204ENST00000481296 TECPR2O15040 1411 aa13.62□□□□□ -0.23
KDM4A-204ENST00000481296 NKTRP30414 1462 aaKnown RBP13.61□□□□□ -0.23
KDM4A-204ENST00000481296 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
KDM4A-204ENST00000481296 EIF3AQ14152 1382 aaKnown RBP13.61□□□□□ -0.23
KDM4A-204ENST00000481296 USP47Q96K76 1375 aa13.61□□□□□ -0.23
KDM4A-204ENST00000481296 CARD11Q9BXL7 1154 aa13.61□□□□□ -0.23
KDM4A-204ENST00000481296 PTCH1Q13635 1447 aa13.61□□□□□ -0.23
KDM4A-204ENST00000481296 PTPRUQ92729 1446 aa13.61□□□□□ -0.23
KDM4A-204ENST00000481296 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
KDM4A-204ENST00000481296 ADGRB2O60241 1585 aa13.59□□□□□ -0.23
KDM4A-204ENST00000481296 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
KDM4A-204ENST00000481296 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
KDM4A-204ENST00000481296 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
KDM4A-204ENST00000481296 ABCC11Q96J66 1382 aa13.56□□□□□ -0.24
KDM4A-204ENST00000481296 FAM135BQ49AJ0 1406 aa13.56□□□□□ -0.24
KDM4A-204ENST00000481296 STK26Q9P289 416 aa13.55□□□□□ -0.24
KDM4A-204ENST00000481296 TRAK1Q9UPV9 953 aa13.55□□□□□ -0.24
KDM4A-204ENST00000481296 ITSN1Q15811 1721 aa13.55□□□□□ -0.24
KDM4A-204ENST00000481296 FMN2Q9NZ56 1722 aa13.55□□□□□ -0.24
KDM4A-204ENST00000481296 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
KDM4A-204ENST00000481296 CDC42BPGQ6DT37 1551 aa13.54□□□□□ -0.24
KDM4A-204ENST00000481296 EIF4G2P78344 907 aaKnown RBP eCLIP13.53□□□□□ -0.24
KDM4A-204ENST00000481296 AMOTL2Q9Y2J4 779 aa13.53□□□□□ -0.24
KDM4A-204ENST00000481296 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
KDM4A-204ENST00000481296 MYOM1P52179 1685 aa13.53□□□□□ -0.24
KDM4A-204ENST00000481296 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
KDM4A-204ENST00000481296 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
KDM4A-204ENST00000481296 LTBP4Q8N2S1 1624 aa13.52□□□□□ -0.25
KDM4A-204ENST00000481296 TOPAZ1Q8N9V7 1692 aa13.52□□□□□ -0.25
KDM4A-204ENST00000481296 RGPD8O14715 1765 aaPredicted RBP13.52□□□□□ -0.25
KDM4A-204ENST00000481296 PLEKHH1Q9ULM0 1364 aa13.51□□□□□ -0.25
KDM4A-204ENST00000481296 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
KDM4A-204ENST00000481296 KCNA6P17658 529 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms