RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 EID1Q9Y6B2 187 aa22.28■■□□□ 1.16
ABCF3-213ENST00000480539 ANKRD30BQ9BXX2 1392 aa22.27■■□□□ 1.16
ABCF3-213ENST00000480539 DMRT2Q9Y5R5 561 aa22.27■■□□□ 1.16
ABCF3-213ENST00000480539 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
ABCF3-213ENST00000480539 ZNF326Q5BKZ1 582 aaKnown RBP22.26■■□□□ 1.15
ABCF3-213ENST00000480539 PPP1R15AO75807 674 aaPredicted RBP22.24■■□□□ 1.15
ABCF3-213ENST00000480539 NUTM2DQ5VT03 806 aaPredicted RBP22.24■■□□□ 1.15
ABCF3-213ENST00000480539 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
ABCF3-213ENST00000480539 DHX57Q6P158 1386 aaKnown RBP22.23■■□□□ 1.15
ABCF3-213ENST00000480539 SPATA31E1Q6ZUB1 1445 aa22.23■■□□□ 1.15
ABCF3-213ENST00000480539 PLEKHG1Q9ULL1 1385 aa22.2■■□□□ 1.14
ABCF3-213ENST00000480539 PPLO60437 1756 aa22.2■■□□□ 1.14
ABCF3-213ENST00000480539 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.19■■□□□ 1.14
ABCF3-213ENST00000480539 IFT172Q9UG01 1749 aa22.17■■□□□ 1.14
ABCF3-213ENST00000480539 ZNF335Q9H4Z2 1342 aaPredicted RBP22.16■■□□□ 1.14
ABCF3-213ENST00000480539 HDGFP51858 240 aaKnown RBP22.16■■□□□ 1.14
ABCF3-213ENST00000480539 RGL3Q3MIN7 710 aa22.16■■□□□ 1.14
ABCF3-213ENST00000480539 BCANQ96GW7 911 aa22.16■■□□□ 1.14
ABCF3-213ENST00000480539 NRXN3Q9Y4C0 1643 aa22.15■■□□□ 1.14
ABCF3-213ENST00000480539 SETBP1Q9Y6X0 1596 aa22.13■■□□□ 1.13
ABCF3-213ENST00000480539 SLC26A8Q96RN1 970 aa22.13■■□□□ 1.13
ABCF3-213ENST00000480539 LTBP4Q8N2S1 1624 aa22.13■■□□□ 1.13
ABCF3-213ENST00000480539 DIP2AQ14689 1571 aa22.12■■□□□ 1.13
ABCF3-213ENST00000480539 RPGRIP1LQ68CZ1 1315 aa22.11■■□□□ 1.13
ABCF3-213ENST00000480539 ADAMTS13Q76LX8 1427 aa22.11■■□□□ 1.13
ABCF3-213ENST00000480539 STRCP1A6NGW2 1772 aa22.1■■□□□ 1.13
ABCF3-213ENST00000480539 MYOM2P54296 1465 aa22.06■■□□□ 1.12
ABCF3-213ENST00000480539 NWD1Q149M9 1564 aa22.06■■□□□ 1.12
ABCF3-213ENST00000480539 VGFO15240 615 aaPredicted RBP22.05■■□□□ 1.12
ABCF3-213ENST00000480539 SETD1AO15047 1707 aaKnown RBP22.05■■□□□ 1.12
ABCF3-213ENST00000480539 CPS1P31327 1500 aa22.05■■□□□ 1.12
ABCF3-213ENST00000480539 ADGRF5Q8IZF2 1346 aa22.05■■□□□ 1.12
ABCF3-213ENST00000480539 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
ABCF3-213ENST00000480539 ALKQ9UM73 1620 aa22.02■■□□□ 1.12
ABCF3-213ENST00000480539 PIK3C2GO75747 1445 aa22.02■■□□□ 1.12
ABCF3-213ENST00000480539 TBX22Q9Y458 520 aa22.01■■□□□ 1.11
ABCF3-213ENST00000480539 NRXN1Q9ULB1 1477 aa22.01■■□□□ 1.11
ABCF3-213ENST00000480539 NEUROD1Q13562 356 aa22■■□□□ 1.11
ABCF3-213ENST00000480539 CHD2O14647 1828 aaKnown RBP21.99■■□□□ 1.11
ABCF3-213ENST00000480539 METP08581 1390 aa21.99■■□□□ 1.11
ABCF3-213ENST00000480539 PTPRUQ92729 1446 aa21.98■■□□□ 1.11
ABCF3-213ENST00000480539 NKTRP30414 1462 aaKnown RBP21.98■■□□□ 1.11
ABCF3-213ENST00000480539 CERKQ8TCT0 537 aa21.98■■□□□ 1.11
ABCF3-213ENST00000480539 DCAF11Q8TEB1 546 aa21.98■■□□□ 1.11
ABCF3-213ENST00000480539 XRN1Q8IZH2 1706 aaKnown RBP21.97■■□□□ 1.11
ABCF3-213ENST00000480539 ASXL1Q8IXJ9 1541 aa21.97■■□□□ 1.11
ABCF3-213ENST00000480539 LRRC7Q96NW7 1537 aa21.97■■□□□ 1.11
ABCF3-213ENST00000480539 KCNA6P17658 529 aa21.96■■□□□ 1.11
ABCF3-213ENST00000480539 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
ABCF3-213ENST00000480539 PIK3R4Q99570 1358 aa21.96■■□□□ 1.11
ABCF3-213ENST00000480539 LAMC1P11047 1609 aa21.95■■□□□ 1.1
ABCF3-213ENST00000480539 IQSEC2Q5JU85 1478 aa21.93■■□□□ 1.1
ABCF3-213ENST00000480539 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
ABCF3-213ENST00000480539 AMOTL2Q9Y2J4 779 aa21.9■■□□□ 1.1
ABCF3-213ENST00000480539 TMEM94Q12767 1356 aa21.89■■□□□ 1.1
ABCF3-213ENST00000480539 L3MBTL2Q969R5 705 aa21.89■■□□□ 1.09
ABCF3-213ENST00000480539 CFAP70Q5T0N1 1121 aa21.88■■□□□ 1.09
ABCF3-213ENST00000480539 RBM33Q96EV2 1170 aaKnown RBP21.88■■□□□ 1.09
ABCF3-213ENST00000480539 PRAG1Q86YV5 1406 aa21.88■■□□□ 1.09
ABCF3-213ENST00000480539 TONSLQ96HA7 1378 aa21.87■■□□□ 1.09
ABCF3-213ENST00000480539 PROSER2Q86WR7 435 aaPredicted RBP21.87■■□□□ 1.09
ABCF3-213ENST00000480539 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
ABCF3-213ENST00000480539 PTCH1Q13635 1447 aa21.86■■□□□ 1.09
ABCF3-213ENST00000480539 TMEM132EQ6IEE7 984 aa21.85■■□□□ 1.09
ABCF3-213ENST00000480539 STAC3Q96MF2 364 aa21.85■■□□□ 1.09
ABCF3-213ENST00000480539 C14orf93Q9H972 538 aaKnown RBP21.85■■□□□ 1.09
ABCF3-213ENST00000480539 ADGRB1O14514 1584 aa21.85■■□□□ 1.09
ABCF3-213ENST00000480539 KNDC1Q76NI1 1749 aa21.85■■□□□ 1.09
ABCF3-213ENST00000480539 YTHDC2Q9H6S0 1430 aaKnown RBP21.83■■□□□ 1.09
ABCF3-213ENST00000480539 ROBO2Q9HCK4 1378 aa21.83■■□□□ 1.08
ABCF3-213ENST00000480539 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
ABCF3-213ENST00000480539 LRPPRCP42704 1394 aaKnown RBP21.82■■□□□ 1.08
ABCF3-213ENST00000480539 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
ABCF3-213ENST00000480539 STK26Q9P289 416 aa21.81■■□□□ 1.08
ABCF3-213ENST00000480539 TECPR2O15040 1411 aa21.8■■□□□ 1.08
ABCF3-213ENST00000480539 NALCNQ8IZF0 1738 aa21.8■■□□□ 1.08
ABCF3-213ENST00000480539 TRPM1Q7Z4N2 1603 aa21.79■■□□□ 1.08
ABCF3-213ENST00000480539 MSH6P52701 1360 aa21.77■■□□□ 1.08
ABCF3-213ENST00000480539 UBAP1LF5GYI3 381 aa21.77■■□□□ 1.08
ABCF3-213ENST00000480539 C14orf37Q86TY3 774 aa21.77■■□□□ 1.08
ABCF3-213ENST00000480539 ABCC11Q96J66 1382 aa21.76■■□□□ 1.07
ABCF3-213ENST00000480539 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
ABCF3-213ENST00000480539 ADGRL3Q9HAR2 1447 aa21.75■■□□□ 1.07
ABCF3-213ENST00000480539 FBXO41Q8TF61 875 aa21.75■■□□□ 1.07
ABCF3-213ENST00000480539 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
ABCF3-213ENST00000480539 DLC1Q96QB1 1528 aa21.74■■□□□ 1.07
ABCF3-213ENST00000480539 PLEKHH1Q9ULM0 1364 aa21.74■■□□□ 1.07
ABCF3-213ENST00000480539 ARHGEF28Q8N1W1 1705 aaKnown RBP21.73■■□□□ 1.07
ABCF3-213ENST00000480539 NBPF1Q3BBV0 1214 aa21.72■■□□□ 1.07
ABCF3-213ENST00000480539 NBPF8Q3BBV2 869 aa21.72■■□□□ 1.07
ABCF3-213ENST00000480539 TRAK1Q9UPV9 953 aa21.71■■□□□ 1.07
ABCF3-213ENST00000480539 FAM135BQ49AJ0 1406 aa21.71■■□□□ 1.07
ABCF3-213ENST00000480539 WAPLQ7Z5K2 1190 aa21.7■■□□□ 1.06
ABCF3-213ENST00000480539 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
ABCF3-213ENST00000480539 RALGAPBQ86X10 1494 aa21.7■■□□□ 1.06
ABCF3-213ENST00000480539 TOM1O60784 492 aa21.69■■□□□ 1.06
ABCF3-213ENST00000480539 PIP4K2BP78356 416 aa21.69■■□□□ 1.06
ABCF3-213ENST00000480539 ROCK2O75116 1388 aaKnown RBP21.69■■□□□ 1.06
ABCF3-213ENST00000480539 DCCP43146 1447 aa21.69■■□□□ 1.06
ABCF3-213ENST00000480539 CDC42BPGQ6DT37 1551 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms