RNA–Protein interactions for RNA: ENST00000480191.1

GTF3C6-202, Transcript of general transcription factor IIIC subunit 6, humanhuman

TSL 3

Gene GTF3C6, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-202ENST00000480191 PRG4Q92954 1404 aaPredicted RBP8.78□□□□□ -1
GTF3C6-202ENST00000480191 NUP153P49790 1475 aaKnown RBP8.77□□□□□ -1
GTF3C6-202ENST00000480191 NCOA2Q15596 1464 aa8.77□□□□□ -1
GTF3C6-202ENST00000480191 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 ARHGEF11O15085 1522 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 CLASP1Q7Z460 1538 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 PPP1R15BQ5SWA1 713 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 ILDR1Q86SU0 546 aaPredicted RBP8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 GPIHBP1Q8IV16 184 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 AK7Q96M32 723 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 FGD6Q6ZV73 1430 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 ABCA8O94911 1581 aa8.77□□□□□ -1.01
GTF3C6-202ENST00000480191 CDK13Q14004 1512 aaKnown RBP8.76□□□□□ -1.01
GTF3C6-202ENST00000480191 GPHNQ9NQX3 736 aaPredicted RBP8.76□□□□□ -1.01
GTF3C6-202ENST00000480191 ITSN2Q9NZM3 1697 aa8.75□□□□□ -1.01
GTF3C6-202ENST00000480191 PTPRGP23470 1445 aa8.75□□□□□ -1.01
GTF3C6-202ENST00000480191 MIA2Q96PC5 1412 aa8.75□□□□□ -1.01
GTF3C6-202ENST00000480191 ADCY10Q96PN6 1610 aa8.75□□□□□ -1.01
GTF3C6-202ENST00000480191 CLSPNQ9HAW4 1339 aa8.75□□□□□ -1.01
GTF3C6-202ENST00000480191 TROQ12816 1431 aaPredicted RBP8.74□□□□□ -1.01
GTF3C6-202ENST00000480191 MLLT3P42568 568 aaPredicted RBP8.74□□□□□ -1.01
GTF3C6-202ENST00000480191 VARS2Q5ST30 1063 aaKnown RBP8.74□□□□□ -1.01
GTF3C6-202ENST00000480191 RBM26Q5T8P6 1007 aaKnown RBP8.74□□□□□ -1.01
GTF3C6-202ENST00000480191 PLB1Q6P1J6 1458 aa8.73□□□□□ -1.01
GTF3C6-202ENST00000480191 SPDYE16A6NNV3 312 aaPredicted RBP8.73□□□□□ -1.01
GTF3C6-202ENST00000480191 MAGI3Q5TCQ9 1506 aa8.73□□□□□ -1.01
GTF3C6-202ENST00000480191 PTPN23Q9H3S7 1636 aa8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 TCOF1Q13428 1488 aaKnown RBP8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 PTGER2P43116 358 aa8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 FAM50AQ14320 339 aaKnown RBP8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 HOMEZQ8IX15 550 aa8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 ACIN1Q9UKV3 1341 aaKnown RBP8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 KIF14Q15058 1648 aa8.72□□□□□ -1.01
GTF3C6-202ENST00000480191 PDIA6Q15084 440 aa8.71□□□□□ -1.02
GTF3C6-202ENST00000480191 ZNF710Q8N1W2 664 aa8.71□□□□□ -1.02
GTF3C6-202ENST00000480191 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.71□□□□□ -1.029e-8■■■■□ 24.3
GTF3C6-202ENST00000480191 UACAQ9BZF9 1416 aa8.71□□□□□ -1.02
GTF3C6-202ENST00000480191 KRI1Q8N9T8 703 aaKnown RBP8.7□□□□□ -1.02
GTF3C6-202ENST00000480191 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
GTF3C6-202ENST00000480191 ABCC2Q92887 1545 aa8.7□□□□□ -1.02
GTF3C6-202ENST00000480191 PLEKHD1A6NEE1 506 aa8.69□□□□□ -1.02
GTF3C6-202ENST00000480191 DPYSL4O14531 572 aa8.69□□□□□ -1.02
GTF3C6-202ENST00000480191 AKNAQ7Z591 1439 aa8.69□□□□□ -1.02
GTF3C6-202ENST00000480191 SETD5Q9C0A6 1442 aa8.69□□□□□ -1.02
GTF3C6-202ENST00000480191 UHRF1BP1LA0JNW5 1464 aa8.69□□□□□ -1.02
GTF3C6-202ENST00000480191 ZNF687Q8N1G0 1237 aa8.68□□□□□ -1.02
GTF3C6-202ENST00000480191 EMILIN3Q9NT22 766 aa8.68□□□□□ -1.02
GTF3C6-202ENST00000480191 ATP10BO94823 1461 aa8.68□□□□□ -1.02
GTF3C6-202ENST00000480191 FOXK1P85037 733 aa8.67□□□□□ -1.02
GTF3C6-202ENST00000480191 DSG2Q14126 1118 aa8.67□□□□□ -1.02
GTF3C6-202ENST00000480191 GPBP1L1Q9HC44 474 aaPredicted RBP8.67□□□□□ -1.02
GTF3C6-202ENST00000480191 HFM1A2PYH4 1435 aa8.66□□□□□ -1.02
GTF3C6-202ENST00000480191 TRIM66O15016 1216 aa8.66□□□□□ -1.02
GTF3C6-202ENST00000480191 ITGAEP38570 1179 aa8.66□□□□□ -1.02
GTF3C6-202ENST00000480191 KDM4CQ9H3R0 1056 aa8.66□□□□□ -1.02
GTF3C6-202ENST00000480191 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.02
GTF3C6-202ENST00000480191 PDE4DQ08499 809 aa8.65□□□□□ -1.02
GTF3C6-202ENST00000480191 MICALL2Q8IY33 904 aa8.65□□□□□ -1.02
GTF3C6-202ENST00000480191 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.03
GTF3C6-202ENST00000480191 RAB3GAP2Q9H2M9 1393 aa8.64□□□□□ -1.03
GTF3C6-202ENST00000480191 CDC42BPAQ5VT25 1732 aa8.64□□□□□ -1.03
GTF3C6-202ENST00000480191 ARID3CA6NKF2 412 aa8.64□□□□□ -1.03
GTF3C6-202ENST00000480191 TMC2Q8TDI7 906 aa8.64□□□□□ -1.03
GTF3C6-202ENST00000480191 ROCK1Q13464 1354 aa8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 DHX57Q6P158 1386 aaKnown RBP8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 GPR37O15354 613 aa8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 DOK7Q18PE1 504 aa8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 ERCC6L2Q5T890 1561 aa8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 KDM5BQ9UGL1 1544 aa8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 GPATCH8Q9UKJ3 1502 aaKnown RBP8.63□□□□□ -1.03
GTF3C6-202ENST00000480191 ADGBQ8N7X0 1667 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 ZCCHC11Q5TAX3 1644 aaKnown RBP8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 PREX2Q70Z35 1606 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 CFDP1Q9UEE9 299 aaPredicted RBP8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 MYO5CQ9NQX4 1742 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 CAMSAP2Q08AD1 1489 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 ABCC10Q5T3U5 1492 aa8.62□□□□□ -1.03
GTF3C6-202ENST00000480191 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
GTF3C6-202ENST00000480191 CROCC2H7BZ55 1655 aa8.61□□□□□ -1.03
GTF3C6-202ENST00000480191 DAPK1P53355 1430 aa8.61□□□□□ -1.03
GTF3C6-202ENST00000480191 PLEKHH2Q8IVE3 1493 aa8.6□□□□□ -1.03
GTF3C6-202ENST00000480191 SHANK2Q9UPX8 1470 aa8.6□□□□□ -1.03
GTF3C6-202ENST00000480191 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
GTF3C6-202ENST00000480191 NAIPQ13075 1403 aa8.6□□□□□ -1.03
GTF3C6-202ENST00000480191 MINK1Q8N4C8 1332 aaPredicted RBP8.59□□□□□ -1.03
GTF3C6-202ENST00000480191 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
GTF3C6-202ENST00000480191 PLPP6Q8IY26 295 aa8.59□□□□□ -1.03
GTF3C6-202ENST00000480191 ARHGEF5Q12774 1597 aa8.59□□□□□ -1.03
GTF3C6-202ENST00000480191 KIF3CO14782 793 aa8.58□□□□□ -1.04
GTF3C6-202ENST00000480191 ARAP3Q8WWN8 1544 aa8.58□□□□□ -1.04
GTF3C6-202ENST00000480191 ADGRL2O95490 1459 aa8.57□□□□□ -1.04
GTF3C6-202ENST00000480191 CDC42BPBQ9Y5S2 1711 aa8.57□□□□□ -1.04
GTF3C6-202ENST00000480191 ABCC5O15440 1437 aa8.57□□□□□ -1.04
GTF3C6-202ENST00000480191 PTPRKQ15262 1439 aa8.57□□□□□ -1.04
GTF3C6-202ENST00000480191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.56□□□□□ -1.04
GTF3C6-202ENST00000480191 MAP3K9P80192 1104 aa8.56□□□□□ -1.04
GTF3C6-202ENST00000480191 MAP2K5Q13163 448 aa8.56□□□□□ -1.04
GTF3C6-202ENST00000480191 ANKRD30AQ9BXX3 1397 aa8.56□□□□□ -1.04
GTF3C6-202ENST00000480191 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms