RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 SATB1Q01826 763 aa13.22□□□□□ -0.29
NUP35-209ENST00000479162 MYH16Q9H6N6 1097 aa13.21□□□□□ -0.29
NUP35-209ENST00000479162 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP35-209ENST00000479162 MAP2K1Q02750 393 aaPredicted RBP13.21□□□□□ -0.29
NUP35-209ENST00000479162 FSD2A1L4K1 749 aa13.21□□□□□ -0.3
NUP35-209ENST00000479162 TRIM6-TRIM34B2RNG4 842 aa13.21□□□□□ -0.3
NUP35-209ENST00000479162 TRIM34Q9BYJ4 488 aa13.21□□□□□ -0.3
NUP35-209ENST00000479162 BACH2Q9BYV9 841 aa13.21□□□□□ -0.3
NUP35-209ENST00000479162 PANK2Q9BZ23 570 aa13.21□□□□□ -0.3
NUP35-209ENST00000479162 PRG4Q92954 1404 aaPredicted RBP13.2□□□□□ -0.3
NUP35-209ENST00000479162 NBPF9Q3BBW0 867 aa13.2□□□□□ -0.3
NUP35-209ENST00000479162 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
NUP35-209ENST00000479162 ERCC6L2Q5T890 1561 aa13.2□□□□□ -0.3
NUP35-209ENST00000479162 ABCA8O94911 1581 aa13.19□□□□□ -0.3
NUP35-209ENST00000479162 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
NUP35-209ENST00000479162 UQCRHLA0A096LP55 91 aa13.18□□□□□ -0.3
NUP35-209ENST00000479162 ANP32CO43423 234 aa13.18□□□□□ -0.3
NUP35-209ENST00000479162 UQCRHP07919 91 aa13.18□□□□□ -0.3
NUP35-209ENST00000479162 CEP83Q9Y592 693 aa13.18□□□□□ -0.3
NUP35-209ENST00000479162 TNIKQ9UKE5 1360 aa13.18□□□□□ -0.3
NUP35-209ENST00000479162 MRE11P49959 708 aa13.17□□□□□ -0.3
NUP35-209ENST00000479162 RAI14Q9P0K7 980 aa13.17□□□□□ -0.3
NUP35-209ENST00000479162 MAPKBP1O60336 1514 aa13.17□□□□□ -0.3
NUP35-209ENST00000479162 MS4A1P11836 297 aa13.17□□□□□ -0.3
NUP35-209ENST00000479162 MYCBPQ99417 103 aaPredicted RBP13.17□□□□□ -0.3
NUP35-209ENST00000479162 FAM9BQ8IZU0 186 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 ABCC2Q92887 1545 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.16□□□□□ -0.3
NUP35-209ENST00000479162 CCDC66A2RUB6 948 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 CBX1P83916 185 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 RNF217Q8TC41 542 aa13.16□□□□□ -0.3
NUP35-209ENST00000479162 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
NUP35-209ENST00000479162 JPH4Q96JJ6 628 aa13.15□□□□□ -0.3
NUP35-209ENST00000479162 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
NUP35-209ENST00000479162 ZNF771Q7L3S4 317 aaPredicted RBP13.15□□□□□ -0.3
NUP35-209ENST00000479162 STK26Q9P289 416 aa13.15□□□□□ -0.3
NUP35-209ENST00000479162 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
NUP35-209ENST00000479162 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
NUP35-209ENST00000479162 CT47A1Q5JQC4 288 aaPredicted RBP13.14□□□□□ -0.31
NUP35-209ENST00000479162 OTUD6BQ8N6M0 293 aa13.14□□□□□ -0.31
NUP35-209ENST00000479162 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.14□□□□□ -0.31
NUP35-209ENST00000479162 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
NUP35-209ENST00000479162 FBLN2P98095 1184 aa13.13□□□□□ -0.31
NUP35-209ENST00000479162 DDX10Q13206 875 aaKnown RBP13.13□□□□□ -0.31
NUP35-209ENST00000479162 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
NUP35-209ENST00000479162 SSR1P43307 286 aaKnown RBP13.13□□□□□ -0.31
NUP35-209ENST00000479162 SLC4A3P48751 1232 aa13.13□□□□□ -0.31
NUP35-209ENST00000479162 CCDC172P0C7W6 258 aa13.12□□□□□ -0.31
NUP35-209ENST00000479162 CASC1Q6TDU7 716 aa13.12□□□□□ -0.31
NUP35-209ENST00000479162 MLECQ14165 292 aa13.12□□□□□ -0.31
NUP35-209ENST00000479162 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
NUP35-209ENST00000479162 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
NUP35-209ENST00000479162 TULP2O00295 520 aa13.11□□□□□ -0.31
NUP35-209ENST00000479162 ARID4AP29374 1257 aaPredicted RBP13.11□□□□□ -0.31
NUP35-209ENST00000479162 RAPGEF6Q8TEU7 1601 aa13.11□□□□□ -0.31
NUP35-209ENST00000479162 KDM5BQ9UGL1 1544 aa13.11□□□□□ -0.31
NUP35-209ENST00000479162 BRPF1P55201 1214 aaPredicted RBP13.11□□□□□ -0.31
NUP35-209ENST00000479162 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
NUP35-209ENST00000479162 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 SMC4Q9NTJ3 1288 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 GLI2P10070 1586 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 NBPF6Q5VWK0 638 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 NBPF5PQ86XG9 351 aaPredicted RBP13.1□□□□□ -0.31
NUP35-209ENST00000479162 NBPF4Q96M43 638 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
NUP35-209ENST00000479162 ZBTB12Q9Y330 459 aaPredicted RBP13.1□□□□□ -0.31
NUP35-209ENST00000479162 ZSCAN30Q86W11 494 aa13.08□□□□□ -0.31
NUP35-209ENST00000479162 CAPN2P17655 700 aa13.08□□□□□ -0.32
NUP35-209ENST00000479162 ISY1Q9ULR0 285 aaKnown RBP13.08□□□□□ -0.32
NUP35-209ENST00000479162 MSNP26038 577 aaKnown RBP13.08□□□□□ -0.32
NUP35-209ENST00000479162 TNNT3P45378 269 aaPredicted RBP13.08□□□□□ -0.32
NUP35-209ENST00000479162 UACAQ9BZF9 1416 aa13.07□□□□□ -0.32
NUP35-209ENST00000479162 TMTC2Q8N394 836 aa13.07□□□□□ -0.32
NUP35-209ENST00000479162 HECW1Q76N89 1606 aa13.07□□□□□ -0.32
NUP35-209ENST00000479162 SIN3AQ96ST3 1273 aa13.07□□□□□ -0.32
NUP35-209ENST00000479162 RBM28Q9NW13 759 aaKnown RBP13.07□□□□□ -0.32
NUP35-209ENST00000479162 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
NUP35-209ENST00000479162 GTF2A1P52655 376 aaPredicted RBP13.06□□□□□ -0.32
NUP35-209ENST00000479162 ZNF513Q8N8E2 541 aaPredicted RBP13.06□□□□□ -0.32
NUP35-209ENST00000479162 PTPRGP23470 1445 aa13.06□□□□□ -0.32
NUP35-209ENST00000479162 ARHGAP35Q9NRY4 1499 aa13.05□□□□□ -0.32
NUP35-209ENST00000479162 ZKSCAN8Q15776 578 aaPredicted RBP13.05□□□□□ -0.32
NUP35-209ENST00000479162 PHLDB1Q86UU1 1377 aa13.05□□□□□ -0.32
NUP35-209ENST00000479162 SGSM3Q96HU1 749 aa13.05□□□□□ -0.32
NUP35-209ENST00000479162 GRPEL1Q9HAV7 217 aa13.05□□□□□ -0.32
NUP35-209ENST00000479162 BSDC1Q9NW68 430 aaPredicted RBP13.05□□□□□ -0.32
NUP35-209ENST00000479162 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
NUP35-209ENST00000479162 FMN1Q68DA7 1419 aa13.04□□□□□ -0.32
NUP35-209ENST00000479162 CALCOCO1Q9P1Z2 691 aa13.03□□□□□ -0.32
NUP35-209ENST00000479162 HNRNPUL2Q1KMD3 747 aaKnown RBP13.03□□□□□ -0.32
NUP35-209ENST00000479162 MFAP1P55081 439 aaKnown RBP13.02□□□□□ -0.33
NUP35-209ENST00000479162 SASS6Q6UVJ0 657 aa13.02□□□□□ -0.33
NUP35-209ENST00000479162 KIF16BQ96L93 1317 aa13.02□□□□□ -0.33
NUP35-209ENST00000479162 MRVI1Q9Y6F6 885 aa13.02□□□□□ -0.33
NUP35-209ENST00000479162 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
NUP35-209ENST00000479162 CTR9Q6PD62 1173 aa13.01□□□□□ -0.33
NUP35-209ENST00000479162 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
NUP35-209ENST00000479162 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
NUP35-209ENST00000479162 CSPP1Q1MSJ5 1256 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms