RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	EID1	Q9Y6B2	187 aa		14.01	□□□□□ -0.17
SFI1-222	ENST00000478887	ANKRD30B	Q9BXX2	1392 aa		14	□□□□□ -0.17
SFI1-222	ENST00000478887	CHGA	P10645	457 aa	Known RBP	14	□□□□□ -0.17
SFI1-222	ENST00000478887	NEXMIF	Q5QGS0	1516 aa		13.99	□□□□□ -0.17
SFI1-222	ENST00000478887	KIF1B	O60333	1816 aa		13.99	□□□□□ -0.17
SFI1-222	ENST00000478887	SPATA31E1	Q6ZUB1	1445 aa		13.98	□□□□□ -0.17
SFI1-222	ENST00000478887	PLEKHG1	Q9ULL1	1385 aa		13.98	□□□□□ -0.17
SFI1-222	ENST00000478887	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
SFI1-222	ENST00000478887	LTBP4	Q8N2S1	1624 aa		13.97	□□□□□ -0.17
SFI1-222	ENST00000478887	HDGF	P51858	240 aa	Known RBP	13.96	□□□□□ -0.17
SFI1-222	ENST00000478887	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	13.94	□□□□□ -0.18
SFI1-222	ENST00000478887	PPP1R15A	O75807	674 aa	Predicted RBP	13.94	□□□□□ -0.18
SFI1-222	ENST00000478887	DIP2A	Q14689	1571 aa		13.94	□□□□□ -0.18
SFI1-222	ENST00000478887	RPGRIP1L	Q68CZ1	1315 aa		13.93	□□□□□ -0.18
SFI1-222	ENST00000478887	SETBP1	Q9Y6X0	1596 aa		13.93	□□□□□ -0.18
SFI1-222	ENST00000478887	ZNF326	Q5BKZ1	582 aa	Known RBP	13.93	□□□□□ -0.18
SFI1-222	ENST00000478887	DHX57	Q6P158	1386 aa	Known RBP	13.93	□□□□□ -0.18
SFI1-222	ENST00000478887	ADAMTS13	Q76LX8	1427 aa		13.92	□□□□□ -0.18
SFI1-222	ENST00000478887	NRXN3	Q9Y4C0	1643 aa		13.92	□□□□□ -0.18
SFI1-222	ENST00000478887	PPL	O60437	1756 aa		13.91	□□□□□ -0.18
SFI1-222	ENST00000478887	IFT172	Q9UG01	1749 aa		13.91	□□□□□ -0.18
SFI1-222	ENST00000478887	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.91	□□□□□ -0.18
SFI1-222	ENST00000478887	CPS1	P31327	1500 aa		13.9	□□□□□ -0.18
SFI1-222	ENST00000478887	NWD1	Q149M9	1564 aa		13.9	□□□□□ -0.18
SFI1-222	ENST00000478887	MYOM2	P54296	1465 aa		13.88	□□□□□ -0.19
SFI1-222	ENST00000478887	IQSEC2	Q5JU85	1478 aa		13.88	□□□□□ -0.19
SFI1-222	ENST00000478887	VGF	O15240	615 aa	Predicted RBP	13.88	□□□□□ -0.19
SFI1-222	ENST00000478887	SLC26A8	Q96RN1	970 aa		13.88	□□□□□ -0.19
SFI1-222	ENST00000478887	TBX22	Q9Y458	520 aa		13.88	□□□□□ -0.19
SFI1-222	ENST00000478887	PIK3R4	Q99570	1358 aa		13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	STRCP1	A6NGW2	1772 aa		13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	RGL3	Q3MIN7	710 aa		13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	PCGF6	Q9BYE7	350 aa		13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	NKTR	P30414	1462 aa	Known RBP	13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	NRXN1	Q9ULB1	1477 aa		13.87	□□□□□ -0.19
SFI1-222	ENST00000478887	CERK	Q8TCT0	537 aa		13.86	□□□□□ -0.19
SFI1-222	ENST00000478887	BCAN	Q96GW7	911 aa		13.86	□□□□□ -0.19
SFI1-222	ENST00000478887	PIK3C2G	O75747	1445 aa		13.85	□□□□□ -0.19
SFI1-222	ENST00000478887	ADGRF5	Q8IZF2	1346 aa		13.85	□□□□□ -0.19
SFI1-222	ENST00000478887	SETD1A	O15047	1707 aa	Known RBP	13.84	□□□□□ -0.19
SFI1-222	ENST00000478887	KCNA6	P17658	529 aa		13.84	□□□□□ -0.19
SFI1-222	ENST00000478887	LRRC7	Q96NW7	1537 aa		13.84	□□□□□ -0.19
SFI1-222	ENST00000478887	ALK	Q9UM73	1620 aa		13.83	□□□□□ -0.2
SFI1-222	ENST00000478887	PTPRU	Q92729	1446 aa		13.82	□□□□□ -0.2
SFI1-222	ENST00000478887	XRN1	Q8IZH2	1706 aa	Known RBP	13.82	□□□□□ -0.2
SFI1-222	ENST00000478887	CHD2	O14647	1828 aa	Known RBP	13.82	□□□□□ -0.2
SFI1-222	ENST00000478887	MET	P08581	1390 aa		13.82	□□□□□ -0.2
SFI1-222	ENST00000478887	PRAG1	Q86YV5	1406 aa		13.81	□□□□□ -0.2
SFI1-222	ENST00000478887	LAMC1	P11047	1609 aa		13.8	□□□□□ -0.2
SFI1-222	ENST00000478887	STAC3	Q96MF2	364 aa		13.8	□□□□□ -0.2
SFI1-222	ENST00000478887	ASXL1	Q8IXJ9	1541 aa		13.8	□□□□□ -0.2
SFI1-222	ENST00000478887	SIN3A	Q96ST3	1273 aa		13.78	□□□□□ -0.2
SFI1-222	ENST00000478887	TMEM94	Q12767	1356 aa		13.77	□□□□□ -0.21
SFI1-222	ENST00000478887	PTCH1	Q13635	1447 aa		13.77	□□□□□ -0.21
SFI1-222	ENST00000478887	DCAF11	Q8TEB1	546 aa		13.77	□□□□□ -0.21
SFI1-222	ENST00000478887	AMOTL2	Q9Y2J4	779 aa		13.77	□□□□□ -0.21
SFI1-222	ENST00000478887	NCOA3	Q9Y6Q9	1424 aa		13.76	□□□□□ -0.21
SFI1-222	ENST00000478887	C14orf93	Q9H972	538 aa	Known RBP	13.76	□□□□□ -0.21
SFI1-222	ENST00000478887	XIRP1	Q702N8	1843 aa	Known RBP	13.76	□□□□□ -0.21
SFI1-222	ENST00000478887	TECPR2	O15040	1411 aa		13.75	□□□□□ -0.21
SFI1-222	ENST00000478887	FBXO41	Q8TF61	875 aa		13.75	□□□□□ -0.21
SFI1-222	ENST00000478887	ADGRB1	O14514	1584 aa		13.75	□□□□□ -0.21
SFI1-222	ENST00000478887	LRPPRC	P42704	1394 aa	Known RBP	13.74	□□□□□ -0.21
SFI1-222	ENST00000478887	CLSPN	Q9HAW4	1339 aa		13.74	□□□□□ -0.21
SFI1-222	ENST00000478887	PROSER2	Q86WR7	435 aa	Predicted RBP	13.74	□□□□□ -0.21
SFI1-222	ENST00000478887	KNDC1	Q76NI1	1749 aa		13.73	□□□□□ -0.21
SFI1-222	ENST00000478887	CFAP70	Q5T0N1	1121 aa		13.73	□□□□□ -0.21
SFI1-222	ENST00000478887	L3MBTL2	Q969R5	705 aa		13.73	□□□□□ -0.21
SFI1-222	ENST00000478887	KDM2A	Q9Y2K7	1162 aa		13.73	□□□□□ -0.21
SFI1-222	ENST00000478887	ROBO2	Q9HCK4	1378 aa		13.72	□□□□□ -0.21
SFI1-222	ENST00000478887	NEUROD1	Q13562	356 aa		13.72	□□□□□ -0.21
SFI1-222	ENST00000478887	YTHDC2	Q9H6S0	1430 aa	Known RBP	13.72	□□□□□ -0.21
SFI1-222	ENST00000478887	ABCC11	Q96J66	1382 aa		13.71	□□□□□ -0.21
SFI1-222	ENST00000478887	KIAA1210	Q9ULL0	1709 aa		13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	RBM33	Q96EV2	1170 aa	Known RBP	13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	DCC	P43146	1447 aa		13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	ADGRL3	Q9HAR2	1447 aa		13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	MSH6	P52701	1360 aa		13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	TONSL	Q96HA7	1378 aa		13.7	□□□□□ -0.22
SFI1-222	ENST00000478887	UBAP1L	F5GYI3	381 aa		13.69	□□□□□ -0.22
SFI1-222	ENST00000478887	TMEM132E	Q6IEE7	984 aa		13.69	□□□□□ -0.22
SFI1-222	ENST00000478887	DLC1	Q96QB1	1528 aa		13.69	□□□□□ -0.22
SFI1-222	ENST00000478887	FAM135B	Q49AJ0	1406 aa		13.68	□□□□□ -0.22
SFI1-222	ENST00000478887	NALCN	Q8IZF0	1738 aa		13.67	□□□□□ -0.22
SFI1-222	ENST00000478887	TOM1	O60784	492 aa		13.67	□□□□□ -0.22
SFI1-222	ENST00000478887	ILDR1	Q86SU0	546 aa	Predicted RBP	13.66	□□□□□ -0.22
SFI1-222	ENST00000478887	SIRT1	Q96EB6	747 aa		13.66	□□□□□ -0.22
SFI1-222	ENST00000478887	C19orf44	Q9H6X5	657 aa		13.66	□□□□□ -0.22
SFI1-222	ENST00000478887	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.66	□□□□□ -0.22
SFI1-222	ENST00000478887	TRPM1	Q7Z4N2	1603 aa		13.65	□□□□□ -0.22
SFI1-222	ENST00000478887	STK26	Q9P289	416 aa		13.65	□□□□□ -0.22
SFI1-222	ENST00000478887	CDC42BPG	Q6DT37	1551 aa		13.64	□□□□□ -0.23
SFI1-222	ENST00000478887	PLEKHH1	Q9ULM0	1364 aa		13.64	□□□□□ -0.23
SFI1-222	ENST00000478887	C14orf37	Q86TY3	774 aa		13.64	□□□□□ -0.23
SFI1-222	ENST00000478887	CADPS2	Q86UW7	1296 aa		13.63	□□□□□ -0.23
SFI1-222	ENST00000478887	CCER1	Q8TC90	406 aa	Predicted RBP	13.63	□□□□□ -0.23
SFI1-222	ENST00000478887	GPRASP1	Q5JY77	1395 aa		13.62	□□□□□ -0.23
SFI1-222	ENST00000478887	NBPF8	Q3BBV2	869 aa		13.62	□□□□□ -0.23
SFI1-222	ENST00000478887	MST1R	Q04912	1400 aa		13.62	□□□□□ -0.23
SFI1-222	ENST00000478887	ARHGEF28	Q8N1W1	1705 aa	Known RBP	13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms