RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 AFF2P51816 1311 aa22.84■■□□□ 1.25
USP11-207ENST00000478596 DIP2AQ14689 1571 aa22.81■■□□□ 1.24
USP11-207ENST00000478596 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
USP11-207ENST00000478596 FOXD1Q16676 465 aa22.81■■□□□ 1.24
USP11-207ENST00000478596 CADPS2Q86UW7 1296 aa22.81■■□□□ 1.24
USP11-207ENST00000478596 NUTM2BA6NNL0 878 aaPredicted RBP22.8■■□□□ 1.24
USP11-207ENST00000478596 NUTM2EB1AL46 878 aaPredicted RBP22.8■■□□□ 1.24
USP11-207ENST00000478596 NUTM2AQ8IVF1 878 aaPredicted RBP22.8■■□□□ 1.24
USP11-207ENST00000478596 ZRANB1Q9UGI0 708 aa22.79■■□□□ 1.24
USP11-207ENST00000478596 BCANQ96GW7 911 aa22.78■■□□□ 1.24
USP11-207ENST00000478596 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
USP11-207ENST00000478596 ERBINQ96RT1 1412 aa22.77■■□□□ 1.24
USP11-207ENST00000478596 C19orf44Q9H6X5 657 aa22.77■■□□□ 1.24
USP11-207ENST00000478596 QTRT2Q9H974 415 aaKnown RBP22.77■■□□□ 1.24
USP11-207ENST00000478596 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
USP11-207ENST00000478596 CHD2O14647 1828 aaKnown RBP22.76■■□□□ 1.23
USP11-207ENST00000478596 NUTM2DQ5VT03 806 aaPredicted RBP22.76■■□□□ 1.23
USP11-207ENST00000478596 ATAD2Q6PL18 1390 aa22.76■■□□□ 1.23
USP11-207ENST00000478596 ATF3P18847 181 aa22.75■■□□□ 1.23
USP11-207ENST00000478596 BRINP3Q76B58 766 aa22.74■■□□□ 1.23
USP11-207ENST00000478596 C14orf37Q86TY3 774 aa22.74■■□□□ 1.23
USP11-207ENST00000478596 KIF15Q9NS87 1388 aa22.74■■□□□ 1.23
USP11-207ENST00000478596 NOS1P29475 1434 aa22.74■■□□□ 1.23
USP11-207ENST00000478596 SETD5Q9C0A6 1442 aa22.74■■□□□ 1.23
USP11-207ENST00000478596 LMTK2Q8IWU2 1503 aa22.73■■□□□ 1.23
USP11-207ENST00000478596 SLC52A1Q9NWF4 448 aa22.73■■□□□ 1.23
USP11-207ENST00000478596 TBX22Q9Y458 520 aa22.73■■□□□ 1.23
USP11-207ENST00000478596 KANK1Q14678 1352 aa22.73■■□□□ 1.23
USP11-207ENST00000478596 ZFYVE9O95405 1425 aa22.73■■□□□ 1.23
USP11-207ENST00000478596 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.72■■□□□ 1.235e-9■□□□□ 9.4
USP11-207ENST00000478596 SETBP1Q9Y6X0 1596 aa22.71■■□□□ 1.23
USP11-207ENST00000478596 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.71■■□□□ 1.23
USP11-207ENST00000478596 NGLY1Q96IV0 654 aa22.7■■□□□ 1.22
USP11-207ENST00000478596 MYOM3Q5VTT5 1437 aa22.69■■□□□ 1.22
USP11-207ENST00000478596 C8orf37Q96NL8 207 aa22.69■■□□□ 1.22
USP11-207ENST00000478596 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
USP11-207ENST00000478596 LRRC59Q96AG4 307 aaKnown RBP22.66■■□□□ 1.22
USP11-207ENST00000478596 PIK3R4Q99570 1358 aa22.65■■□□□ 1.22
USP11-207ENST00000478596 PPP1R15AO75807 674 aaPredicted RBP22.65■■□□□ 1.22
USP11-207ENST00000478596 ASXL1Q8IXJ9 1541 aa22.64■■□□□ 1.21
USP11-207ENST00000478596 RRP7BPQ9NSQ0 103 aa22.64■■□□□ 1.21
USP11-207ENST00000478596 DCCP43146 1447 aa22.64■■□□□ 1.21
USP11-207ENST00000478596 RIMS2Q9UQ26 1411 aa22.64■■□□□ 1.21
USP11-207ENST00000478596 CCDC125Q86Z20 511 aa22.62■■□□□ 1.21
USP11-207ENST00000478596 ADAMTS13Q76LX8 1427 aa22.61■■□□□ 1.21
USP11-207ENST00000478596 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
USP11-207ENST00000478596 EP400Q96L91 3159 aa22.6■■□□□ 1.21
USP11-207ENST00000478596 NHSL1Q5SYE7 1610 aa22.59■■□□□ 1.21
USP11-207ENST00000478596 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.58■■□□□ 1.21
USP11-207ENST00000478596 ABCC5O15440 1437 aa22.57■■□□□ 1.2
USP11-207ENST00000478596 RPRD2Q5VT52 1461 aaKnown RBP22.56■■□□□ 1.2
USP11-207ENST00000478596 MST1RQ04912 1400 aa22.56■■□□□ 1.2
USP11-207ENST00000478596 TRPC5Q9UL62 973 aaPredicted RBP22.55■■□□□ 1.2
USP11-207ENST00000478596 TMEM131LA2VDJ0 1609 aa22.53■■□□□ 1.2
USP11-207ENST00000478596 USP21Q9UK80 565 aa22.53■■□□□ 1.2
USP11-207ENST00000478596 AMOTL2Q9Y2J4 779 aa22.53■■□□□ 1.2
USP11-207ENST00000478596 VPS8Q8N3P4 1428 aa22.53■■□□□ 1.2
USP11-207ENST00000478596 ADAMTS2O95450 1211 aa22.52■■□□□ 1.2
USP11-207ENST00000478596 CROCC2H7BZ55 1655 aa22.52■■□□□ 1.2
USP11-207ENST00000478596 FNBP4Q8N3X1 1017 aaPredicted RBP22.51■■□□□ 1.19
USP11-207ENST00000478596 PTPRUQ92729 1446 aa22.5■■□□□ 1.19
USP11-207ENST00000478596 TRPM2O94759 1503 aa22.5■■□□□ 1.19
USP11-207ENST00000478596 ATRNO75882 1429 aa22.49■■□□□ 1.19
USP11-207ENST00000478596 GCC2Q8IWJ2 1684 aa22.49■■□□□ 1.19
USP11-207ENST00000478596 DDX17Q92841 729 aaKnown RBP22.48■■□□□ 1.19
USP11-207ENST00000478596 MYO5BQ9ULV0 1848 aa22.47■■□□□ 1.19
USP11-207ENST00000478596 DAPK1P53355 1430 aa22.47■■□□□ 1.19
USP11-207ENST00000478596 ANKRD30AQ9BXX3 1397 aa22.46■■□□□ 1.19
USP11-207ENST00000478596 LRP5O75197 1615 aa22.46■■□□□ 1.19
USP11-207ENST00000478596 PTCH1Q13635 1447 aa22.45■■□□□ 1.18
USP11-207ENST00000478596 KANK4Q5T7N3 995 aaPredicted RBP22.44■■□□□ 1.18
USP11-207ENST00000478596 BLMP54132 1417 aaPredicted RBP22.41■■□□□ 1.18
USP11-207ENST00000478596 XRN1Q8IZH2 1706 aaKnown RBP22.41■■□□□ 1.18
USP11-207ENST00000478596 ADGRL3Q9HAR2 1447 aa22.4■■□□□ 1.18
USP11-207ENST00000478596 LAMC1P11047 1609 aa22.39■■□□□ 1.18
USP11-207ENST00000478596 SOS2Q07890 1332 aaPredicted RBP22.39■■□□□ 1.18
USP11-207ENST00000478596 CHGAP10645 457 aaKnown RBP22.39■■□□□ 1.17
USP11-207ENST00000478596 UNC13BO14795 1591 aa22.38■■□□□ 1.17
USP11-207ENST00000478596 PTPN23Q9H3S7 1636 aa22.37■■□□□ 1.17
USP11-207ENST00000478596 BCL9LQ86UU0 1499 aa22.36■■□□□ 1.17
USP11-207ENST00000478596 APLP2Q06481 763 aa22.36■■□□□ 1.17
USP11-207ENST00000478596 CHIC2Q9UKJ5 165 aa22.36■■□□□ 1.17
USP11-207ENST00000478596 C1orf167Q5SNV9 1468 aa22.34■■□□□ 1.17
USP11-207ENST00000478596 GJD4Q96KN9 370 aaPredicted RBP22.34■■□□□ 1.17
USP11-207ENST00000478596 DEFB132Q7Z7B7 95 aa22.32■■□□□ 1.16
USP11-207ENST00000478596 COL22A1Q8NFW1 1626 aaPredicted RBP22.31■■□□□ 1.16
USP11-207ENST00000478596 ADGRL2O95490 1459 aa22.3■■□□□ 1.16
USP11-207ENST00000478596 MYOM2P54296 1465 aa22.3■■□□□ 1.16
USP11-207ENST00000478596 NRXN3Q9Y4C0 1643 aa22.3■■□□□ 1.16
USP11-207ENST00000478596 METP08581 1390 aa22.29■■□□□ 1.16
USP11-207ENST00000478596 ANKRD50Q9ULJ7 1429 aa22.29■■□□□ 1.16
USP11-207ENST00000478596 SF3B2Q13435 895 aaKnown RBP22.27■■□□□ 1.16
USP11-207ENST00000478596 NALCNQ8IZF0 1738 aa22.27■■□□□ 1.16
USP11-207ENST00000478596 ORAI2Q96SN7 254 aa22.26■■□□□ 1.15
USP11-207ENST00000478596 HRCP23327 699 aa22.25■■□□□ 1.15
USP11-207ENST00000478596 RALGAPBQ86X10 1494 aa22.22■■□□□ 1.15
USP11-207ENST00000478596 SPHKAPQ2M3C7 1700 aa22.22■■□□□ 1.15
USP11-207ENST00000478596 GLI3P10071 1580 aa22.21■■□□□ 1.15
USP11-207ENST00000478596 E9PCH4 1651 aa22.2■■□□□ 1.15
USP11-207ENST00000478596 PSDA5PKW4 1024 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms