RNA–Protein interactions for RNA: ENST00000478215.1

COL1A2-207, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 3

Gene COL1A2, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-207ENST00000478215 CHGAP10645 457 aaKnown RBP19.43■□□□□ 0.7
COL1A2-207ENST00000478215 EID1Q9Y6B2 187 aa19.43■□□□□ 0.7
COL1A2-207ENST00000478215 FOXD1Q16676 465 aa19.42■□□□□ 0.7
COL1A2-207ENST00000478215 ILDR1Q86SU0 546 aaPredicted RBP19.4■□□□□ 0.7
COL1A2-207ENST00000478215 IFT172Q9UG01 1749 aa19.39■□□□□ 0.7
COL1A2-207ENST00000478215 MPHOSPH9Q99550 1183 aa19.39■□□□□ 0.69
COL1A2-207ENST00000478215 NEXMIFQ5QGS0 1516 aa19.39■□□□□ 0.69
COL1A2-207ENST00000478215 NRXN3Q9Y4C0 1643 aa19.39■□□□□ 0.69
COL1A2-207ENST00000478215 CPS1P31327 1500 aa19.38■□□□□ 0.69
COL1A2-207ENST00000478215 IQSEC2Q5JU85 1478 aa19.37■□□□□ 0.69
COL1A2-207ENST00000478215 SENP3Q9H4L4 574 aaPredicted RBP19.37■□□□□ 0.69
COL1A2-207ENST00000478215 NUTM2DQ5VT03 806 aaPredicted RBP19.36■□□□□ 0.69
COL1A2-207ENST00000478215 PLEKHG1Q9ULL1 1385 aa19.35■□□□□ 0.69
COL1A2-207ENST00000478215 FBXO41Q8TF61 875 aa19.35■□□□□ 0.69
COL1A2-207ENST00000478215 NWD1Q149M9 1564 aa19.34■□□□□ 0.69
COL1A2-207ENST00000478215 SETD1AO15047 1707 aaKnown RBP19.34■□□□□ 0.69
COL1A2-207ENST00000478215 ACIN1Q9UKV3 1341 aaKnown RBP19.33■□□□□ 0.69
COL1A2-207ENST00000478215 PPP1R15AO75807 674 aaPredicted RBP19.33■□□□□ 0.68
COL1A2-207ENST00000478215 SLC26A8Q96RN1 970 aa19.33■□□□□ 0.68
COL1A2-207ENST00000478215 DIP2AQ14689 1571 aa19.32■□□□□ 0.68
COL1A2-207ENST00000478215 SETBP1Q9Y6X0 1596 aa19.32■□□□□ 0.68
COL1A2-207ENST00000478215 ADAMTS13Q76LX8 1427 aa19.31■□□□□ 0.68
COL1A2-207ENST00000478215 LRRC7Q96NW7 1537 aa19.3■□□□□ 0.68
COL1A2-207ENST00000478215 ZNF326Q5BKZ1 582 aaKnown RBP19.3■□□□□ 0.68
COL1A2-207ENST00000478215 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL1A2-207ENST00000478215 CCDC144AA2RUR9 1427 aa19.3■□□□□ 0.68
COL1A2-207ENST00000478215 HDGFP51858 240 aaKnown RBP19.29■□□□□ 0.68
COL1A2-207ENST00000478215 HRCP23327 699 aa19.28■□□□□ 0.68
COL1A2-207ENST00000478215 BCANQ96GW7 911 aa19.28■□□□□ 0.68
COL1A2-207ENST00000478215 SPATA31E1Q6ZUB1 1445 aa19.27■□□□□ 0.68
COL1A2-207ENST00000478215 ALKQ9UM73 1620 aa19.26■□□□□ 0.67
COL1A2-207ENST00000478215 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
COL1A2-207ENST00000478215 NKTRP30414 1462 aaKnown RBP19.23■□□□□ 0.67
COL1A2-207ENST00000478215 ANKRD30BQ9BXX2 1392 aa19.22■□□□□ 0.67
COL1A2-207ENST00000478215 TBX22Q9Y458 520 aa19.22■□□□□ 0.67
COL1A2-207ENST00000478215 KCNA6P17658 529 aa19.21■□□□□ 0.67
COL1A2-207ENST00000478215 PTPRUQ92729 1446 aa19.19■□□□□ 0.66
COL1A2-207ENST00000478215 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
COL1A2-207ENST00000478215 RPGRIP1LQ68CZ1 1315 aa19.19■□□□□ 0.66
COL1A2-207ENST00000478215 UBAP1LF5GYI3 381 aa19.18■□□□□ 0.66
COL1A2-207ENST00000478215 PIK3R4Q99570 1358 aa19.17■□□□□ 0.66
COL1A2-207ENST00000478215 RBM33Q96EV2 1170 aaKnown RBP19.16■□□□□ 0.66
COL1A2-207ENST00000478215 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.16■□□□□ 0.66
COL1A2-207ENST00000478215 METP08581 1390 aa19.16■□□□□ 0.66
COL1A2-207ENST00000478215 TMEM94Q12767 1356 aa19.16■□□□□ 0.66
COL1A2-207ENST00000478215 VGFO15240 615 aaPredicted RBP19.15■□□□□ 0.66
COL1A2-207ENST00000478215 PROSER2Q86WR7 435 aaPredicted RBP19.15■□□□□ 0.66
COL1A2-207ENST00000478215 NALCNQ8IZF0 1738 aa19.14■□□□□ 0.65
COL1A2-207ENST00000478215 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
COL1A2-207ENST00000478215 ADGRF5Q8IZF2 1346 aa19.13■□□□□ 0.65
COL1A2-207ENST00000478215 LAMC1P11047 1609 aa19.11■□□□□ 0.65
COL1A2-207ENST00000478215 ASXL1Q8IXJ9 1541 aa19.11■□□□□ 0.65
COL1A2-207ENST00000478215 KNDC1Q76NI1 1749 aa19.11■□□□□ 0.65
COL1A2-207ENST00000478215 MYOM2P54296 1465 aa19.1■□□□□ 0.65
COL1A2-207ENST00000478215 AMOTL2Q9Y2J4 779 aa19.1■□□□□ 0.65
COL1A2-207ENST00000478215 PIK3C2GO75747 1445 aa19.09■□□□□ 0.65
COL1A2-207ENST00000478215 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
COL1A2-207ENST00000478215 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
COL1A2-207ENST00000478215 TOM1O60784 492 aa19.08■□□□□ 0.64
COL1A2-207ENST00000478215 PIP4K2BP78356 416 aa19.08■□□□□ 0.64
COL1A2-207ENST00000478215 SCAF1Q9H7N4 1312 aaKnown RBP19.07■□□□□ 0.64
COL1A2-207ENST00000478215 PHF23Q9BUL5 403 aaPredicted RBP19.05■□□□□ 0.64
COL1A2-207ENST00000478215 MSH6P52701 1360 aa19.05■□□□□ 0.64
COL1A2-207ENST00000478215 PRAG1Q86YV5 1406 aa19.03■□□□□ 0.64
COL1A2-207ENST00000478215 NCOA3Q9Y6Q9 1424 aa19.03■□□□□ 0.64
COL1A2-207ENST00000478215 DHX57Q6P158 1386 aaKnown RBP19.03■□□□□ 0.64
COL1A2-207ENST00000478215 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
COL1A2-207ENST00000478215 ROBO2Q9HCK4 1378 aa19.01■□□□□ 0.63
COL1A2-207ENST00000478215 KIAA1210Q9ULL0 1709 aa19■□□□□ 0.63
COL1A2-207ENST00000478215 C14orf37Q86TY3 774 aa18.99■□□□□ 0.63
COL1A2-207ENST00000478215 PHLPP1O60346 1717 aa18.99■□□□□ 0.63
COL1A2-207ENST00000478215 RGPD8O14715 1765 aaPredicted RBP18.98■□□□□ 0.63
COL1A2-207ENST00000478215 TMEM132EQ6IEE7 984 aa18.98■□□□□ 0.63
COL1A2-207ENST00000478215 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
COL1A2-207ENST00000478215 KDM2AQ9Y2K7 1162 aa18.98■□□□□ 0.63
COL1A2-207ENST00000478215 ADGRL3Q9HAR2 1447 aa18.98■□□□□ 0.63
COL1A2-207ENST00000478215 HSPA1LP34931 641 aa18.97■□□□□ 0.63
COL1A2-207ENST00000478215 CFAP70Q5T0N1 1121 aa18.97■□□□□ 0.63
COL1A2-207ENST00000478215 TECPR2O15040 1411 aa18.97■□□□□ 0.63
COL1A2-207ENST00000478215 ADGRB1O14514 1584 aa18.97■□□□□ 0.63
COL1A2-207ENST00000478215 C19orf44Q9H6X5 657 aa18.96■□□□□ 0.63
COL1A2-207ENST00000478215 C14orf93Q9H972 538 aaKnown RBP18.96■□□□□ 0.63
COL1A2-207ENST00000478215 YTHDC2Q9H6S0 1430 aaKnown RBP18.96■□□□□ 0.63
COL1A2-207ENST00000478215 ARHGEF28Q8N1W1 1705 aaKnown RBP18.96■□□□□ 0.63
COL1A2-207ENST00000478215 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
COL1A2-207ENST00000478215 DCCP43146 1447 aa18.95■□□□□ 0.62
COL1A2-207ENST00000478215 FAM135BQ49AJ0 1406 aa18.95■□□□□ 0.62
COL1A2-207ENST00000478215 SIN3AQ96ST3 1273 aa18.95■□□□□ 0.62
COL1A2-207ENST00000478215 STK26Q9P289 416 aa18.94■□□□□ 0.62
COL1A2-207ENST00000478215 SLAIN2Q9P270 581 aa18.93■□□□□ 0.62
COL1A2-207ENST00000478215 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
COL1A2-207ENST00000478215 NHSL1Q5SYE7 1610 aa18.92■□□□□ 0.62
COL1A2-207ENST00000478215 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
COL1A2-207ENST00000478215 CDC42BPGQ6DT37 1551 aa18.91■□□□□ 0.62
COL1A2-207ENST00000478215 ATF3P18847 181 aa18.91■□□□□ 0.62
COL1A2-207ENST00000478215 CADPS2Q86UW7 1296 aa18.91■□□□□ 0.62
COL1A2-207ENST00000478215 PLEKHH1Q9ULM0 1364 aa18.91■□□□□ 0.62
COL1A2-207ENST00000478215 MST1RQ04912 1400 aa18.91■□□□□ 0.62
COL1A2-207ENST00000478215 COL16A1Q07092 1604 aaPredicted RBP18.9■□□□□ 0.62
COL1A2-207ENST00000478215 TRPM1Q7Z4N2 1603 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms