RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 FOXD1Q16676 465 aa11.83□□□□□ -0.52
SPTLC1-205ENST00000477888 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
SPTLC1-205ENST00000477888 BCANQ96GW7 911 aa11.83□□□□□ -0.52
SPTLC1-205ENST00000477888 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
SPTLC1-205ENST00000477888 ATF3P18847 181 aa11.82□□□□□ -0.52
SPTLC1-205ENST00000477888 TBX22Q9Y458 520 aa11.82□□□□□ -0.52
SPTLC1-205ENST00000477888 AHDC1Q5TGY3 1603 aaPredicted RBP11.82□□□□□ -0.52
SPTLC1-205ENST00000477888 C14orf37Q86TY3 774 aa11.81□□□□□ -0.52
SPTLC1-205ENST00000477888 C8orf37Q96NL8 207 aa11.81□□□□□ -0.52
SPTLC1-205ENST00000477888 EIF2AK4Q9P2K8 1649 aaKnown RBP11.81□□□□□ -0.52
SPTLC1-205ENST00000477888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.8□□□□□ -0.52
SPTLC1-205ENST00000477888 SLC52A1Q9NWF4 448 aa11.8□□□□□ -0.52
SPTLC1-205ENST00000477888 ATAD2Q6PL18 1390 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 PLEKHG1Q9ULL1 1385 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 MAST1Q9Y2H9 1570 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 SETD5Q9C0A6 1442 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 SHPRHQ149N8 1683 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 NGLY1Q96IV0 654 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
SPTLC1-205ENST00000477888 DUOX2Q9NRD8 1548 aa11.78□□□□□ -0.52
SPTLC1-205ENST00000477888 LRRC59Q96AG4 307 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-205ENST00000477888 KDM5AP29375 1690 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-205ENST00000477888 NOS1P29475 1434 aa11.77□□□□□ -0.52
SPTLC1-205ENST00000477888 CEP152O94986 1710 aa11.77□□□□□ -0.52
SPTLC1-205ENST00000477888 CCDC125Q86Z20 511 aa11.77□□□□□ -0.53
SPTLC1-205ENST00000477888 RRP7BPQ9NSQ0 103 aa11.77□□□□□ -0.53
SPTLC1-205ENST00000477888 CFAP65Q6ZU64 1925 aaKnown RBP11.77□□□□□ -0.53
SPTLC1-205ENST00000477888 ZFYVE9O95405 1425 aa11.77□□□□□ -0.53
SPTLC1-205ENST00000477888 HDGFP51858 240 aaKnown RBP11.76□□□□□ -0.53
SPTLC1-205ENST00000477888 KIF15Q9NS87 1388 aa11.76□□□□□ -0.53
SPTLC1-205ENST00000477888 KANK1Q14678 1352 aa11.75□□□□□ -0.53
SPTLC1-205ENST00000477888 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
SPTLC1-205ENST00000477888 PPP1R15AO75807 674 aaPredicted RBP11.74□□□□□ -0.53
SPTLC1-205ENST00000477888 PNPLA6Q8IY17 1366 aa11.74□□□□□ -0.53
SPTLC1-205ENST00000477888 ADAMTS13Q76LX8 1427 aa11.73□□□□□ -0.53
SPTLC1-205ENST00000477888 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
SPTLC1-205ENST00000477888 PIK3R4Q99570 1358 aa11.73□□□□□ -0.53
SPTLC1-205ENST00000477888 ADGRB3O60242 1522 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 MYOM3Q5VTT5 1437 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 RIMS2Q9UQ26 1411 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 ADAMTS2O95450 1211 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 FNBP4Q8N3X1 1017 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 DDX17Q92841 729 aaKnown RBP11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 USP21Q9UK80 565 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 TRPC5Q9UL62 973 aaPredicted RBP11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 EP400Q96L91 3159 aa11.72□□□□□ -0.53
SPTLC1-205ENST00000477888 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.71□□□□□ -0.53
SPTLC1-205ENST00000477888 CHD2O14647 1828 aaKnown RBP11.71□□□□□ -0.54
SPTLC1-205ENST00000477888 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.71□□□□□ -0.54
SPTLC1-205ENST00000477888 ASXL1Q8IXJ9 1541 aa11.7□□□□□ -0.54
SPTLC1-205ENST00000477888 DCCP43146 1447 aa11.7□□□□□ -0.54
SPTLC1-205ENST00000477888 ABCC5O15440 1437 aa11.69□□□□□ -0.54
SPTLC1-205ENST00000477888 MST1RQ04912 1400 aa11.69□□□□□ -0.54
SPTLC1-205ENST00000477888 PTPRUQ92729 1446 aa11.69□□□□□ -0.54
SPTLC1-205ENST00000477888 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
SPTLC1-205ENST00000477888 ATRNO75882 1429 aa11.67□□□□□ -0.54
SPTLC1-205ENST00000477888 DEFB132Q7Z7B7 95 aa11.65□□□□□ -0.54
SPTLC1-205ENST00000477888 SOS2Q07890 1332 aaPredicted RBP11.64□□□□□ -0.55
SPTLC1-205ENST00000477888 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-205ENST00000477888 BLMP54132 1417 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-205ENST00000477888 CHGAP10645 457 aaKnown RBP11.63□□□□□ -0.55
SPTLC1-205ENST00000477888 GJD4Q96KN9 370 aaPredicted RBP11.63□□□□□ -0.55
SPTLC1-205ENST00000477888 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
SPTLC1-205ENST00000477888 PTCH1Q13635 1447 aa11.62□□□□□ -0.55
SPTLC1-205ENST00000477888 NHSL1Q5SYE7 1610 aa11.62□□□□□ -0.55
SPTLC1-205ENST00000477888 CHIC2Q9UKJ5 165 aa11.62□□□□□ -0.55
SPTLC1-205ENST00000477888 TMEM131LA2VDJ0 1609 aa11.61□□□□□ -0.55
SPTLC1-205ENST00000477888 ANKRD30AQ9BXX3 1397 aa11.61□□□□□ -0.55
SPTLC1-205ENST00000477888 DAPK1P53355 1430 aa11.6□□□□□ -0.55
SPTLC1-205ENST00000477888 HRCP23327 699 aa11.6□□□□□ -0.55
SPTLC1-205ENST00000477888 TRPM2O94759 1503 aa11.6□□□□□ -0.55
SPTLC1-205ENST00000477888 ORAI2Q96SN7 254 aa11.59□□□□□ -0.55
SPTLC1-205ENST00000477888 ADGRL3Q9HAR2 1447 aa11.59□□□□□ -0.55
SPTLC1-205ENST00000477888 C1orf167Q5SNV9 1468 aa11.58□□□□□ -0.56
SPTLC1-205ENST00000477888 METP08581 1390 aa11.58□□□□□ -0.56
SPTLC1-205ENST00000477888 LRP5O75197 1615 aa11.58□□□□□ -0.56
SPTLC1-205ENST00000477888 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
SPTLC1-205ENST00000477888 SF3B2Q13435 895 aaKnown RBP11.56□□□□□ -0.56
SPTLC1-205ENST00000477888 UNC5CLQ8IV45 518 aa11.55□□□□□ -0.56
SPTLC1-205ENST00000477888 MYOM2P54296 1465 aa11.55□□□□□ -0.56
SPTLC1-205ENST00000477888 ANKRD50Q9ULJ7 1429 aa11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 GCC2Q8IWJ2 1684 aa11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 XRN1Q8IZH2 1706 aaKnown RBP11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 ONECUT3O60422 494 aaPredicted RBP11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 KCNA4P22459 653 aa11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 LAMC1P11047 1609 aa11.53□□□□□ -0.56
SPTLC1-205ENST00000477888 RALGAPBQ86X10 1494 aa11.52□□□□□ -0.56
SPTLC1-205ENST00000477888 MYO5BQ9ULV0 1848 aa11.52□□□□□ -0.57
SPTLC1-205ENST00000477888 YY1P25490 414 aa11.52□□□□□ -0.57
SPTLC1-205ENST00000477888 SEPT12Q8IYM1 358 aa11.52□□□□□ -0.57
SPTLC1-205ENST00000477888 UNC13BO14795 1591 aa11.52□□□□□ -0.57
SPTLC1-205ENST00000477888 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
SPTLC1-205ENST00000477888 CROCC2H7BZ55 1655 aa11.51□□□□□ -0.57
SPTLC1-205ENST00000477888 BAG6P46379 1132 aa11.5□□□□□ -0.57
SPTLC1-205ENST00000477888 ADGRL2O95490 1459 aa11.5□□□□□ -0.57
SPTLC1-205ENST00000477888 SLIT2O94813 1529 aa11.5□□□□□ -0.57
SPTLC1-205ENST00000477888 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
SPTLC1-205ENST00000477888 PTPN23Q9H3S7 1636 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms