RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 RIMBP3Q9UFD9 1639 aa16.54■□□□□ 0.24
RTFDC1-207ENST00000477573 NEO1Q92859 1461 aa16.53■□□□□ 0.24
RTFDC1-207ENST00000477573 BRD2P25440 801 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-207ENST00000477573 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
RTFDC1-207ENST00000477573 L1TD1Q5T7N2 865 aaKnown RBP16.53■□□□□ 0.24
RTFDC1-207ENST00000477573 PAXIP1Q6ZW49 1069 aaPredicted RBP16.52■□□□□ 0.24
RTFDC1-207ENST00000477573 POGZQ7Z3K3 1410 aa16.52■□□□□ 0.23
RTFDC1-207ENST00000477573 STAC3Q96MF2 364 aa16.51■□□□□ 0.23
RTFDC1-207ENST00000477573 KIDINS220Q9ULH0 1771 aa16.51■□□□□ 0.23
RTFDC1-207ENST00000477573 PLA2R1Q13018 1463 aa16.5■□□□□ 0.23
RTFDC1-207ENST00000477573 KDM5CP41229 1560 aa16.5■□□□□ 0.23
RTFDC1-207ENST00000477573 RALGAPBQ86X10 1494 aa16.5■□□□□ 0.23
RTFDC1-207ENST00000477573 SPATA31E1Q6ZUB1 1445 aa16.49■□□□□ 0.23
RTFDC1-207ENST00000477573 KIF3BO15066 747 aa16.49■□□□□ 0.23
RTFDC1-207ENST00000477573 MLH3Q9UHC1 1453 aa16.49■□□□□ 0.23
RTFDC1-207ENST00000477573 TET3O43151 1660 aa16.48■□□□□ 0.23
RTFDC1-207ENST00000477573 SMAP1Q8IYB5 467 aaPredicted RBP16.48■□□□□ 0.23
RTFDC1-207ENST00000477573 CHMP4BQ9H444 224 aaKnown RBP16.48■□□□□ 0.23
RTFDC1-207ENST00000477573 GLI2P10070 1586 aa16.48■□□□□ 0.23
RTFDC1-207ENST00000477573 TCERG1O14776 1098 aaKnown RBP16.47■□□□□ 0.23
RTFDC1-207ENST00000477573 HECW2Q9P2P5 1572 aa16.47■□□□□ 0.23
RTFDC1-207ENST00000477573 KDM2AQ9Y2K7 1162 aa16.47■□□□□ 0.23
RTFDC1-207ENST00000477573 A2MP01023 1474 aa16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 PRDM15P57071 1507 aaPredicted RBP16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 VWDEQ8N2E2 1590 aa16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 MAP3K4Q9Y6R4 1608 aa16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 E9PCH4 1651 aa16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 MAP7D2Q96T17 732 aa16.46■□□□□ 0.23
RTFDC1-207ENST00000477573 USP47Q96K76 1375 aa16.45■□□□□ 0.22
RTFDC1-207ENST00000477573 POLR1AO95602 1720 aaPredicted RBP16.45■□□□□ 0.22
RTFDC1-207ENST00000477573 CCDC7Q96M83 1385 aa16.44■□□□□ 0.22
RTFDC1-207ENST00000477573 MS4A1P11836 297 aa16.44■□□□□ 0.22
RTFDC1-207ENST00000477573 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
RTFDC1-207ENST00000477573 TRPM2O94759 1503 aa16.43■□□□□ 0.22
RTFDC1-207ENST00000477573 RGL3Q3MIN7 710 aa16.43■□□□□ 0.22
RTFDC1-207ENST00000477573 SPHKAPQ2M3C7 1700 aa16.43■□□□□ 0.22
RTFDC1-207ENST00000477573 NPM2Q86SE8 214 aaKnown RBP16.43■□□□□ 0.22
RTFDC1-207ENST00000477573 PTPRTO14522 1441 aa16.42■□□□□ 0.22
RTFDC1-207ENST00000477573 PRAG1Q86YV5 1406 aa16.42■□□□□ 0.22
RTFDC1-207ENST00000477573 RNF17Q9BXT8 1623 aaKnown RBP16.41■□□□□ 0.22
RTFDC1-207ENST00000477573 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
RTFDC1-207ENST00000477573 MROH1Q8NDA8 1641 aa16.41■□□□□ 0.22
RTFDC1-207ENST00000477573 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-207ENST00000477573 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
RTFDC1-207ENST00000477573 CNTLNQ9NXG0 1405 aa16.4■□□□□ 0.22
RTFDC1-207ENST00000477573 ROCK2O75116 1388 aaKnown RBP16.4■□□□□ 0.22
RTFDC1-207ENST00000477573 LMTK2Q8IWU2 1503 aa16.39■□□□□ 0.21
RTFDC1-207ENST00000477573 ZBED9Q6R2W3 1325 aa16.39■□□□□ 0.21
RTFDC1-207ENST00000477573 PDE4AP27815 886 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 BCORL1Q5H9F3 1711 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 TRPM1Q7Z4N2 1603 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 CEP152O94986 1710 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 KIF7Q2M1P5 1343 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
RTFDC1-207ENST00000477573 RAPGEF3O95398 923 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 FAM69CQ0P6D2 419 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 DIP2BQ9P265 1576 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 EFCAB6Q5THR3 1501 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 ABCA6Q8N139 1617 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 FTSJ3Q8IY81 847 aaKnown RBP16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 RICTORQ6R327 1708 aa16.37■□□□□ 0.21
RTFDC1-207ENST00000477573 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
RTFDC1-207ENST00000477573 NEURL4Q96JN8 1562 aa16.35■□□□□ 0.21
RTFDC1-207ENST00000477573 TEX2Q8IWB9 1127 aa16.34■□□□□ 0.21
RTFDC1-207ENST00000477573 LAMC1P11047 1609 aa16.34■□□□□ 0.21
RTFDC1-207ENST00000477573 CLTCL1P53675 1640 aa16.34■□□□□ 0.21
RTFDC1-207ENST00000477573 GPRASP1Q5JY77 1395 aa16.34■□□□□ 0.21
RTFDC1-207ENST00000477573 CHRM1P11229 460 aaPredicted RBP16.33■□□□□ 0.2
RTFDC1-207ENST00000477573 DIP2CQ9Y2E4 1556 aa16.32■□□□□ 0.2
RTFDC1-207ENST00000477573 PPRC1Q5VV67 1664 aaKnown RBP16.32■□□□□ 0.2
RTFDC1-207ENST00000477573 GGT6Q6P531 493 aa16.32■□□□□ 0.2
RTFDC1-207ENST00000477573 ST20-MTHFSA0A0A6YYL1 179 aa16.31■□□□□ 0.2
RTFDC1-207ENST00000477573 VGFO15240 615 aaPredicted RBP16.3■□□□□ 0.2
RTFDC1-207ENST00000477573 TERF1P54274 439 aa16.3■□□□□ 0.2
RTFDC1-207ENST00000477573 MTERF4Q7Z6M4 381 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-207ENST00000477573 SMG6Q86US8 1419 aaKnown RBP16.3■□□□□ 0.2
RTFDC1-207ENST00000477573 KIF1BO60333 1816 aa16.3■□□□□ 0.2
RTFDC1-207ENST00000477573 FRAT2O75474 233 aaPredicted RBP16.29■□□□□ 0.2
RTFDC1-207ENST00000477573 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
RTFDC1-207ENST00000477573 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
RTFDC1-207ENST00000477573 NBPF1Q3BBV0 1214 aa16.27■□□□□ 0.2
RTFDC1-207ENST00000477573 ABCC3O15438 1527 aa16.27■□□□□ 0.2
RTFDC1-207ENST00000477573 MADDQ8WXG6 1647 aa16.27■□□□□ 0.19
RTFDC1-207ENST00000477573 TSPOAP1O95153 1857 aa16.27■□□□□ 0.19
RTFDC1-207ENST00000477573 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.19
RTFDC1-207ENST00000477573 DMTNQ08495 405 aa16.26■□□□□ 0.19
RTFDC1-207ENST00000477573 TMEM51Q9NW97 253 aa16.26■□□□□ 0.19
RTFDC1-207ENST00000477573 HOMEZQ8IX15 550 aa16.26■□□□□ 0.19
RTFDC1-207ENST00000477573 ZFP91Q96JP5 570 aaPredicted RBP16.26■□□□□ 0.19
RTFDC1-207ENST00000477573 NPATQ14207 1427 aa16.25■□□□□ 0.19
RTFDC1-207ENST00000477573 ZC3H13Q5T200 1668 aaKnown RBP16.25■□□□□ 0.19
RTFDC1-207ENST00000477573 PRKRIP1Q9H875 184 aaPredicted RBP16.24■□□□□ 0.19
RTFDC1-207ENST00000477573 YEATS2Q9ULM3 1422 aa16.24■□□□□ 0.19
RTFDC1-207ENST00000477573 CAMSAP1Q5T5Y3 1602 aa16.24■□□□□ 0.19
RTFDC1-207ENST00000477573 KIF20AO95235 890 aa16.23■□□□□ 0.19
RTFDC1-207ENST00000477573 TNNT2P45379 298 aaPredicted RBP16.23■□□□□ 0.19
RTFDC1-207ENST00000477573 MYOM2P54296 1465 aa16.23■□□□□ 0.19
RTFDC1-207ENST00000477573 KIAA1210Q9ULL0 1709 aa16.22■□□□□ 0.19
RTFDC1-207ENST00000477573 ESPNB1AK53 854 aa16.22■□□□□ 0.19
RTFDC1-207ENST00000477573 DHX37Q8IY37 1157 aaKnown RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms