RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 TCP11L2Q8N4U5 519 aa14.04□□□□□ -0.16
COL27A1-204ENST00000477421 CCDC141Q6ZP82 1450 aa14.04□□□□□ -0.16
COL27A1-204ENST00000477421 MFAP1P55081 439 aaKnown RBP14.04□□□□□ -0.16
COL27A1-204ENST00000477421 ERBINQ96RT1 1412 aa14.03□□□□□ -0.16
COL27A1-204ENST00000477421 MSH5O43196 834 aa14.02□□□□□ -0.17
COL27A1-204ENST00000477421 C20orf194Q5TEA3 1177 aa14.02□□□□□ -0.17
COL27A1-204ENST00000477421 HMOX1P09601 288 aa14.02□□□□□ -0.17
COL27A1-204ENST00000477421 IPO8O15397 1037 aaKnown RBP14.01□□□□□ -0.17
COL27A1-204ENST00000477421 A0A0G2JS52 829 aa14.01□□□□□ -0.17
COL27A1-204ENST00000477421 NCLP19338 710 aaKnown RBP14.01□□□□□ -0.17
COL27A1-204ENST00000477421 HDGFP51858 240 aaKnown RBP14□□□□□ -0.17
COL27A1-204ENST00000477421 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
COL27A1-204ENST00000477421 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
COL27A1-204ENST00000477421 SMG6Q86US8 1419 aaKnown RBP14□□□□□ -0.17
COL27A1-204ENST00000477421 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
COL27A1-204ENST00000477421 ADGRF5Q8IZF2 1346 aa14□□□□□ -0.17
COL27A1-204ENST00000477421 CFAP43Q8NDM7 1665 aa14□□□□□ -0.17
COL27A1-204ENST00000477421 RIPK4P57078 832 aa13.99□□□□□ -0.17
COL27A1-204ENST00000477421 FAM161AQ3B820 660 aa13.99□□□□□ -0.17
COL27A1-204ENST00000477421 GZF1Q9H116 711 aaPredicted RBP13.99□□□□□ -0.17
COL27A1-204ENST00000477421 PMFBP1Q8TBY8 1022 aa13.99□□□□□ -0.17
COL27A1-204ENST00000477421 RUNDC1Q96C34 613 aa13.99□□□□□ -0.17
COL27A1-204ENST00000477421 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
COL27A1-204ENST00000477421 HSP90AB1P08238 724 aaKnown RBP13.98□□□□□ -0.17
COL27A1-204ENST00000477421 ANP32BQ92688 251 aaKnown RBP13.98□□□□□ -0.17
COL27A1-204ENST00000477421 RTF1Q92541 710 aaKnown RBP13.98□□□□□ -0.17
COL27A1-204ENST00000477421 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
COL27A1-204ENST00000477421 TSR2Q969E8 191 aaKnown RBP13.97□□□□□ -0.17
COL27A1-204ENST00000477421 STAC3Q96MF2 364 aa13.97□□□□□ -0.17
COL27A1-204ENST00000477421 PRAM1Q96QH2 718 aa13.97□□□□□ -0.17
COL27A1-204ENST00000477421 DIAPH1O60610 1272 aaKnown RBP13.97□□□□□ -0.17
COL27A1-204ENST00000477421 ZKSCAN2Q63HK3 967 aa13.97□□□□□ -0.17
COL27A1-204ENST00000477421 NGDNQ8NEJ9 315 aaKnown RBP13.97□□□□□ -0.17
COL27A1-204ENST00000477421 KIF21AQ7Z4S6 1674 aa13.96□□□□□ -0.17
COL27A1-204ENST00000477421 FOXD4L1Q9NU39 408 aa13.96□□□□□ -0.18
COL27A1-204ENST00000477421 RAPGEF6Q8TEU7 1601 aa13.96□□□□□ -0.18
COL27A1-204ENST00000477421 WDR62O43379 1518 aa13.95□□□□□ -0.18
COL27A1-204ENST00000477421 DISP1Q96F81 1524 aa13.95□□□□□ -0.18
COL27A1-204ENST00000477421 HAP1P54257 671 aaPredicted RBP13.95□□□□□ -0.18
COL27A1-204ENST00000477421 KIF14Q15058 1648 aa13.95□□□□□ -0.18
COL27A1-204ENST00000477421 TCOF1Q13428 1488 aaKnown RBP13.95□□□□□ -0.18
COL27A1-204ENST00000477421 HSCBQ8IWL3 235 aa13.94□□□□□ -0.18
COL27A1-204ENST00000477421 ADAMTS12P58397 1594 aa13.93□□□□□ -0.18
COL27A1-204ENST00000477421 DZIP1LQ8IYY4 767 aaKnown RBP13.92□□□□□ -0.18
COL27A1-204ENST00000477421 COG3Q96JB2 828 aa13.92□□□□□ -0.18
COL27A1-204ENST00000477421 CABP1Q9NZU7 370 aa13.92□□□□□ -0.18
COL27A1-204ENST00000477421 AMPHP49418 695 aa13.91□□□□□ -0.18
COL27A1-204ENST00000477421 ANKRD45Q5TZF3 282 aa13.91□□□□□ -0.18
COL27A1-204ENST00000477421 KIAA0556O60303 1618 aa13.91□□□□□ -0.18
COL27A1-204ENST00000477421 EXOSC9Q06265 439 aaKnown RBP13.91□□□□□ -0.18
COL27A1-204ENST00000477421 CHMP4BQ9H444 224 aaKnown RBP13.91□□□□□ -0.18
COL27A1-204ENST00000477421 PZPP20742 1482 aa13.91□□□□□ -0.18
COL27A1-204ENST00000477421 TESK2Q96S53 571 aa13.9□□□□□ -0.18
COL27A1-204ENST00000477421 TXNDC2Q86VQ3 553 aa13.9□□□□□ -0.18
COL27A1-204ENST00000477421 NECTIN2Q92692 538 aa13.9□□□□□ -0.18
COL27A1-204ENST00000477421 OS9Q13438 667 aaPredicted RBP13.9□□□□□ -0.18
COL27A1-204ENST00000477421 CASC1Q6TDU7 716 aa13.9□□□□□ -0.18
COL27A1-204ENST00000477421 LNPKQ9C0E8 428 aa13.9□□□□□ -0.19
COL27A1-204ENST00000477421 CALD1Q05682 793 aaKnown RBP13.89□□□□□ -0.19
COL27A1-204ENST00000477421 BACH2Q9BYV9 841 aa13.89□□□□□ -0.19
COL27A1-204ENST00000477421 ABCA5Q8WWZ7 1642 aa13.89□□□□□ -0.19
COL27A1-204ENST00000477421 GOLGA6L22H0YM25 854 aa13.89□□□□□ -0.19
COL27A1-204ENST00000477421 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
COL27A1-204ENST00000477421 PRKAR2BP31323 418 aa13.88□□□□□ -0.19
COL27A1-204ENST00000477421 FBXO31Q5XUX0 539 aaPredicted RBP13.88□□□□□ -0.19
COL27A1-204ENST00000477421 WWC1Q8IX03 1113 aa13.88□□□□□ -0.19
COL27A1-204ENST00000477421 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
COL27A1-204ENST00000477421 SLFN5Q08AF3 891 aa13.88□□□□□ -0.19
COL27A1-204ENST00000477421 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
COL27A1-204ENST00000477421 KDM6BO15054 1643 aa13.87□□□□□ -0.19
COL27A1-204ENST00000477421 FBLN1P23142 703 aa13.87□□□□□ -0.19
COL27A1-204ENST00000477421 IDI1Q13907 227 aa13.87□□□□□ -0.19
COL27A1-204ENST00000477421 PLCB2Q00722 1185 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 SYCP2Q9BX26 1530 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 TRAPPC8Q9Y2L5 1435 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 WAPLQ7Z5K2 1190 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 CDK19Q9BWU1 502 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 SAMD9Q5K651 1589 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 NSD3Q9BZ95 1437 aa13.86□□□□□ -0.19
COL27A1-204ENST00000477421 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-204ENST00000477421 DUSP27Q5VZP5 1158 aa13.85□□□□□ -0.19
COL27A1-204ENST00000477421 THUMPD2Q9BTF0 503 aaKnown RBP13.85□□□□□ -0.19
COL27A1-204ENST00000477421 TRIM44Q96DX7 344 aaPredicted RBP13.85□□□□□ -0.19
COL27A1-204ENST00000477421 ADGRL1O94910 1474 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 STK31Q9BXU1 1019 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 C1orf115Q9H7X2 142 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 NOL8Q76FK4 1167 aaKnown RBP13.84□□□□□ -0.19
COL27A1-204ENST00000477421 NGEFQ8N5V2 710 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 DDX19BQ9UMR2 479 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 TEX14Q8IWB6 1497 aa13.84□□□□□ -0.19
COL27A1-204ENST00000477421 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.19
COL27A1-204ENST00000477421 PRAG1Q86YV5 1406 aa13.83□□□□□ -0.2
COL27A1-204ENST00000477421 RALGAPBQ86X10 1494 aa13.82□□□□□ -0.2
COL27A1-204ENST00000477421 SLC26A8Q96RN1 970 aa13.82□□□□□ -0.2
COL27A1-204ENST00000477421 PDZRN3Q9UPQ7 1066 aa13.82□□□□□ -0.2
COL27A1-204ENST00000477421 RRS1Q15050 365 aaKnown RBP13.82□□□□□ -0.2
COL27A1-204ENST00000477421 CD109Q6YHK3 1445 aa13.82□□□□□ -0.2
COL27A1-204ENST00000477421 FANCAO15360 1455 aa13.81□□□□□ -0.2
COL27A1-204ENST00000477421 LMOD3Q0VAK6 560 aa13.81□□□□□ -0.2
COL27A1-204ENST00000477421 FAM135AQ9P2D6 1515 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms