RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 DMRT2Q9Y5R5 561 aa21.13■□□□□ 0.97
CCNL1-217ENST00000476367 LTKP29376 864 aa21.12■□□□□ 0.97
CCNL1-217ENST00000476367 EID1Q9Y6B2 187 aa21.12■□□□□ 0.97
CCNL1-217ENST00000476367 MED14O60244 1454 aa21.12■□□□□ 0.97
CCNL1-217ENST00000476367 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
CCNL1-217ENST00000476367 NUTM2DQ5VT03 806 aaPredicted RBP21.09■□□□□ 0.97
CCNL1-217ENST00000476367 NEXMIFQ5QGS0 1516 aa21.08■□□□□ 0.97
CCNL1-217ENST00000476367 PPP1R15AO75807 674 aaPredicted RBP21.08■□□□□ 0.97
CCNL1-217ENST00000476367 SENP3Q9H4L4 574 aaPredicted RBP21.08■□□□□ 0.97
CCNL1-217ENST00000476367 PPLO60437 1756 aa21.07■□□□□ 0.96
CCNL1-217ENST00000476367 SPATA31E1Q6ZUB1 1445 aa21.07■□□□□ 0.96
CCNL1-217ENST00000476367 SIN3AQ96ST3 1273 aa21.06■□□□□ 0.96
CCNL1-217ENST00000476367 IFT172Q9UG01 1749 aa21.05■□□□□ 0.96
CCNL1-217ENST00000476367 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.04■□□□□ 0.96
CCNL1-217ENST00000476367 HDGFP51858 240 aaKnown RBP21.02■□□□□ 0.96
CCNL1-217ENST00000476367 RGL3Q3MIN7 710 aa21.02■□□□□ 0.96
CCNL1-217ENST00000476367 BCANQ96GW7 911 aa21.02■□□□□ 0.96
CCNL1-217ENST00000476367 PLEKHG1Q9ULL1 1385 aa21.02■□□□□ 0.96
CCNL1-217ENST00000476367 ZNF335Q9H4Z2 1342 aaPredicted RBP21■□□□□ 0.95
CCNL1-217ENST00000476367 NRXN3Q9Y4C0 1643 aa20.99■□□□□ 0.95
CCNL1-217ENST00000476367 SLC26A8Q96RN1 970 aa20.97■□□□□ 0.95
CCNL1-217ENST00000476367 STRCP1A6NGW2 1772 aa20.97■□□□□ 0.95
CCNL1-217ENST00000476367 LTBP4Q8N2S1 1624 aa20.97■□□□□ 0.95
CCNL1-217ENST00000476367 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
CCNL1-217ENST00000476367 DIP2AQ14689 1571 aa20.95■□□□□ 0.94
CCNL1-217ENST00000476367 RPGRIP1LQ68CZ1 1315 aa20.95■□□□□ 0.94
CCNL1-217ENST00000476367 CLSPNQ9HAW4 1339 aa20.95■□□□□ 0.94
CCNL1-217ENST00000476367 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
CCNL1-217ENST00000476367 ADAMTS13Q76LX8 1427 aa20.94■□□□□ 0.94
CCNL1-217ENST00000476367 NEUROD1Q13562 356 aa20.93■□□□□ 0.94
CCNL1-217ENST00000476367 VGFO15240 615 aaPredicted RBP20.92■□□□□ 0.94
CCNL1-217ENST00000476367 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
CCNL1-217ENST00000476367 CHD2O14647 1828 aaKnown RBP20.9■□□□□ 0.94
CCNL1-217ENST00000476367 ADGRF5Q8IZF2 1346 aa20.89■□□□□ 0.93
CCNL1-217ENST00000476367 NWD1Q149M9 1564 aa20.89■□□□□ 0.93
CCNL1-217ENST00000476367 MYOM2P54296 1465 aa20.89■□□□□ 0.93
CCNL1-217ENST00000476367 CPS1P31327 1500 aa20.89■□□□□ 0.93
CCNL1-217ENST00000476367 ALKQ9UM73 1620 aa20.88■□□□□ 0.93
CCNL1-217ENST00000476367 L3MBTL2Q969R5 705 aa20.86■□□□□ 0.93
CCNL1-217ENST00000476367 TBX22Q9Y458 520 aa20.86■□□□□ 0.93
CCNL1-217ENST00000476367 PIK3C2GO75747 1445 aa20.85■□□□□ 0.93
CCNL1-217ENST00000476367 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
CCNL1-217ENST00000476367 CERKQ8TCT0 537 aa20.84■□□□□ 0.93
CCNL1-217ENST00000476367 DCAF11Q8TEB1 546 aa20.84■□□□□ 0.93
CCNL1-217ENST00000476367 LAMC1P11047 1609 aa20.83■□□□□ 0.93
CCNL1-217ENST00000476367 KDM2AQ9Y2K7 1162 aa20.83■□□□□ 0.93
CCNL1-217ENST00000476367 XRN1Q8IZH2 1706 aaKnown RBP20.83■□□□□ 0.93
CCNL1-217ENST00000476367 METP08581 1390 aa20.83■□□□□ 0.93
CCNL1-217ENST00000476367 NKTRP30414 1462 aaKnown RBP20.82■□□□□ 0.92
CCNL1-217ENST00000476367 XIRP1Q702N8 1843 aaKnown RBP20.82■□□□□ 0.92
CCNL1-217ENST00000476367 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
CCNL1-217ENST00000476367 LRRC7Q96NW7 1537 aa20.81■□□□□ 0.92
CCNL1-217ENST00000476367 KCNA6P17658 529 aa20.81■□□□□ 0.92
CCNL1-217ENST00000476367 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
CCNL1-217ENST00000476367 ASXL1Q8IXJ9 1541 aa20.79■□□□□ 0.92
CCNL1-217ENST00000476367 IQSEC2Q5JU85 1478 aa20.77■□□□□ 0.92
CCNL1-217ENST00000476367 AMOTL2Q9Y2J4 779 aa20.76■□□□□ 0.91
CCNL1-217ENST00000476367 PRAG1Q86YV5 1406 aa20.76■□□□□ 0.91
CCNL1-217ENST00000476367 TONSLQ96HA7 1378 aa20.76■□□□□ 0.91
CCNL1-217ENST00000476367 RBM33Q96EV2 1170 aaKnown RBP20.75■□□□□ 0.91
CCNL1-217ENST00000476367 TMEM94Q12767 1356 aa20.74■□□□□ 0.91
CCNL1-217ENST00000476367 NBPF8Q3BBV2 869 aa20.74■□□□□ 0.91
CCNL1-217ENST00000476367 CFAP70Q5T0N1 1121 aa20.74■□□□□ 0.91
CCNL1-217ENST00000476367 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
CCNL1-217ENST00000476367 STAC3Q96MF2 364 aa20.72■□□□□ 0.91
CCNL1-217ENST00000476367 KNDC1Q76NI1 1749 aa20.72■□□□□ 0.91
CCNL1-217ENST00000476367 TMEM132EQ6IEE7 984 aa20.71■□□□□ 0.91
CCNL1-217ENST00000476367 C14orf93Q9H972 538 aaKnown RBP20.71■□□□□ 0.91
CCNL1-217ENST00000476367 TIMELESSQ9UNS1 1208 aa20.71■□□□□ 0.91
CCNL1-217ENST00000476367 KIAA1210Q9ULL0 1709 aa20.7■□□□□ 0.9
CCNL1-217ENST00000476367 TRPM1Q7Z4N2 1603 aa20.7■□□□□ 0.9
CCNL1-217ENST00000476367 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
CCNL1-217ENST00000476367 STK26Q9P289 416 aa20.68■□□□□ 0.9
CCNL1-217ENST00000476367 PTCH1Q13635 1447 aa20.68■□□□□ 0.9
CCNL1-217ENST00000476367 YTHDC2Q9H6S0 1430 aaKnown RBP20.68■□□□□ 0.9
CCNL1-217ENST00000476367 NALCNQ8IZF0 1738 aa20.68■□□□□ 0.9
CCNL1-217ENST00000476367 LRPPRCP42704 1394 aaKnown RBP20.67■□□□□ 0.9
CCNL1-217ENST00000476367 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
CCNL1-217ENST00000476367 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
CCNL1-217ENST00000476367 NBPF1Q3BBV0 1214 aa20.65■□□□□ 0.9
CCNL1-217ENST00000476367 TECPR2O15040 1411 aa20.65■□□□□ 0.9
CCNL1-217ENST00000476367 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.65■□□□□ 0.9
CCNL1-217ENST00000476367 UBAP1LF5GYI3 381 aa20.64■□□□□ 0.89
CCNL1-217ENST00000476367 MSH6P52701 1360 aa20.63■□□□□ 0.89
CCNL1-217ENST00000476367 FBXO41Q8TF61 875 aa20.62■□□□□ 0.89
CCNL1-217ENST00000476367 ABCC11Q96J66 1382 aa20.62■□□□□ 0.89
CCNL1-217ENST00000476367 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
CCNL1-217ENST00000476367 ADGRL3Q9HAR2 1447 aa20.6■□□□□ 0.89
CCNL1-217ENST00000476367 NCOA3Q9Y6Q9 1424 aa20.6■□□□□ 0.89
CCNL1-217ENST00000476367 RALGAPBQ86X10 1494 aa20.6■□□□□ 0.89
CCNL1-217ENST00000476367 DLC1Q96QB1 1528 aa20.59■□□□□ 0.89
CCNL1-217ENST00000476367 PLEKHH1Q9ULM0 1364 aa20.58■□□□□ 0.89
CCNL1-217ENST00000476367 SCAF1Q9H7N4 1312 aaKnown RBP20.58■□□□□ 0.89
CCNL1-217ENST00000476367 GPRASP1Q5JY77 1395 aa20.58■□□□□ 0.88
CCNL1-217ENST00000476367 TOM1O60784 492 aa20.57■□□□□ 0.88
CCNL1-217ENST00000476367 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
CCNL1-217ENST00000476367 TRAK1Q9UPV9 953 aa20.57■□□□□ 0.88
CCNL1-217ENST00000476367 PIP4K2BP78356 416 aa20.56■□□□□ 0.88
CCNL1-217ENST00000476367 FAM135BQ49AJ0 1406 aa20.56■□□□□ 0.88
CCNL1-217ENST00000476367 ROCK2O75116 1388 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms