RNA–Protein interactions for RNA: ENST00000476143.6

TMCO1-205, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-205ENST00000476143 SCAF1Q9H7N4 1312 aaKnown RBP20.67■□□□□ 0.9
TMCO1-205ENST00000476143 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
TMCO1-205ENST00000476143 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.89
TMCO1-205ENST00000476143 LRRC7Q96NW7 1537 aa20.63■□□□□ 0.89
TMCO1-205ENST00000476143 ZFYVE9O95405 1425 aa20.62■□□□□ 0.89
TMCO1-205ENST00000476143 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
TMCO1-205ENST00000476143 SLC26A8Q96RN1 970 aa20.62■□□□□ 0.89
TMCO1-205ENST00000476143 ACIN1Q9UKV3 1341 aaKnown RBP20.61■□□□□ 0.89
TMCO1-205ENST00000476143 PIP4K2BP78356 416 aa20.61■□□□□ 0.89
TMCO1-205ENST00000476143 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
TMCO1-205ENST00000476143 TRPM2O94759 1503 aa20.59■□□□□ 0.89
TMCO1-205ENST00000476143 KCNA6P17658 529 aa20.59■□□□□ 0.89
TMCO1-205ENST00000476143 ZNF326Q5BKZ1 582 aaKnown RBP20.59■□□□□ 0.89
TMCO1-205ENST00000476143 KIF1BO60333 1816 aa20.57■□□□□ 0.88
TMCO1-205ENST00000476143 DIP2AQ14689 1571 aa20.56■□□□□ 0.88
TMCO1-205ENST00000476143 SENP3Q9H4L4 574 aaPredicted RBP20.56■□□□□ 0.88
TMCO1-205ENST00000476143 NKTRP30414 1462 aaKnown RBP20.56■□□□□ 0.88
TMCO1-205ENST00000476143 PROSER2Q86WR7 435 aaPredicted RBP20.55■□□□□ 0.88
TMCO1-205ENST00000476143 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
TMCO1-205ENST00000476143 NWD1Q149M9 1564 aa20.54■□□□□ 0.88
TMCO1-205ENST00000476143 CLTCL1P53675 1640 aa20.53■□□□□ 0.88
TMCO1-205ENST00000476143 TBX22Q9Y458 520 aa20.53■□□□□ 0.88
TMCO1-205ENST00000476143 CHD2O14647 1828 aaKnown RBP20.51■□□□□ 0.87
TMCO1-205ENST00000476143 TMEM94Q12767 1356 aa20.51■□□□□ 0.87
TMCO1-205ENST00000476143 PIK3R4Q99570 1358 aa20.5■□□□□ 0.87
TMCO1-205ENST00000476143 XIRP1Q702N8 1843 aaKnown RBP20.49■□□□□ 0.87
TMCO1-205ENST00000476143 SETD5Q9C0A6 1442 aa20.48■□□□□ 0.87
TMCO1-205ENST00000476143 MSH6P52701 1360 aa20.47■□□□□ 0.87
TMCO1-205ENST00000476143 ADAMTS13Q76LX8 1427 aa20.46■□□□□ 0.87
TMCO1-205ENST00000476143 HSPA1LP34931 641 aa20.46■□□□□ 0.87
TMCO1-205ENST00000476143 C14orf37Q86TY3 774 aa20.46■□□□□ 0.87
TMCO1-205ENST00000476143 DISP3Q9P2K9 1392 aa20.46■□□□□ 0.87
TMCO1-205ENST00000476143 CCDC144AA2RUR9 1427 aa20.45■□□□□ 0.86
TMCO1-205ENST00000476143 MPHOSPH9Q99550 1183 aa20.45■□□□□ 0.86
TMCO1-205ENST00000476143 SETBP1Q9Y6X0 1596 aa20.44■□□□□ 0.86
TMCO1-205ENST00000476143 VGFO15240 615 aaPredicted RBP20.44■□□□□ 0.86
TMCO1-205ENST00000476143 NEXMIFQ5QGS0 1516 aa20.43■□□□□ 0.86
TMCO1-205ENST00000476143 RPGRIP1LQ68CZ1 1315 aa20.43■□□□□ 0.86
TMCO1-205ENST00000476143 ALKQ9UM73 1620 aa20.42■□□□□ 0.86
TMCO1-205ENST00000476143 NCOA3Q9Y6Q9 1424 aa20.42■□□□□ 0.86
TMCO1-205ENST00000476143 FOXD1Q16676 465 aa20.4■□□□□ 0.86
TMCO1-205ENST00000476143 RBM33Q96EV2 1170 aaKnown RBP20.4■□□□□ 0.86
TMCO1-205ENST00000476143 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
TMCO1-205ENST00000476143 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
TMCO1-205ENST00000476143 RAB3GAP2Q9H2M9 1393 aa20.37■□□□□ 0.85
TMCO1-205ENST00000476143 FAM135BQ49AJ0 1406 aa20.36■□□□□ 0.85
TMCO1-205ENST00000476143 PPLO60437 1756 aa20.36■□□□□ 0.85
TMCO1-205ENST00000476143 ATF3P18847 181 aa20.35■□□□□ 0.85
TMCO1-205ENST00000476143 CADPS2Q86UW7 1296 aa20.34■□□□□ 0.85
TMCO1-205ENST00000476143 C19orf44Q9H6X5 657 aa20.34■□□□□ 0.85
TMCO1-205ENST00000476143 XRN1Q8IZH2 1706 aaKnown RBP20.33■□□□□ 0.85
TMCO1-205ENST00000476143 ROBO1Q9Y6N7 1651 aa20.33■□□□□ 0.85
TMCO1-205ENST00000476143 SLAIN2Q9P270 581 aa20.32■□□□□ 0.84
TMCO1-205ENST00000476143 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
TMCO1-205ENST00000476143 RGL3Q3MIN7 710 aa20.31■□□□□ 0.84
TMCO1-205ENST00000476143 METP08581 1390 aa20.31■□□□□ 0.84
TMCO1-205ENST00000476143 ANKRD30BQ9BXX2 1392 aa20.31■□□□□ 0.84
TMCO1-205ENST00000476143 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.3■□□□□ 0.84
TMCO1-205ENST00000476143 HRCP23327 699 aa20.28■□□□□ 0.84
TMCO1-205ENST00000476143 PHF23Q9BUL5 403 aaPredicted RBP20.28■□□□□ 0.84
TMCO1-205ENST00000476143 MED1Q15648 1581 aaPredicted RBP20.28■□□□□ 0.84
TMCO1-205ENST00000476143 DCCP43146 1447 aa20.27■□□□□ 0.84
TMCO1-205ENST00000476143 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
TMCO1-205ENST00000476143 IFT172Q9UG01 1749 aa20.25■□□□□ 0.83
TMCO1-205ENST00000476143 PTCH1Q13635 1447 aa20.24■□□□□ 0.83
TMCO1-205ENST00000476143 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
TMCO1-205ENST00000476143 PHLPP1O60346 1717 aa20.24■□□□□ 0.83
TMCO1-205ENST00000476143 ADGRL3Q9HAR2 1447 aa20.22■□□□□ 0.83
TMCO1-205ENST00000476143 ADGRF5Q8IZF2 1346 aa20.21■□□□□ 0.83
TMCO1-205ENST00000476143 NALCNQ8IZF0 1738 aa20.18■□□□□ 0.82
TMCO1-205ENST00000476143 PRAG1Q86YV5 1406 aa20.18■□□□□ 0.82
TMCO1-205ENST00000476143 PIK3C2GO75747 1445 aa20.17■□□□□ 0.82
TMCO1-205ENST00000476143 LAMC1P11047 1609 aa20.16■□□□□ 0.82
TMCO1-205ENST00000476143 JCADQ9P266 1359 aa20.16■□□□□ 0.82
TMCO1-205ENST00000476143 MYOM2P54296 1465 aa20.16■□□□□ 0.82
TMCO1-205ENST00000476143 ROBO2Q9HCK4 1378 aa20.15■□□□□ 0.82
TMCO1-205ENST00000476143 AHDC1Q5TGY3 1603 aaPredicted RBP20.14■□□□□ 0.81
TMCO1-205ENST00000476143 MST1RQ04912 1400 aa20.14■□□□□ 0.81
TMCO1-205ENST00000476143 ILDR2Q71H61 639 aa20.13■□□□□ 0.81
TMCO1-205ENST00000476143 STK26Q9P289 416 aa20.13■□□□□ 0.81
TMCO1-205ENST00000476143 COL16A1Q07092 1604 aaPredicted RBP20.13■□□□□ 0.81
TMCO1-205ENST00000476143 LRPPRCP42704 1394 aaKnown RBP20.12■□□□□ 0.81
TMCO1-205ENST00000476143 BRINP3Q76B58 766 aa20.12■□□□□ 0.81
TMCO1-205ENST00000476143 KNDC1Q76NI1 1749 aa20.12■□□□□ 0.81
TMCO1-205ENST00000476143 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
TMCO1-205ENST00000476143 STAC3Q96MF2 364 aa20.11■□□□□ 0.81
TMCO1-205ENST00000476143 DHX57Q6P158 1386 aaKnown RBP20.1■□□□□ 0.81
TMCO1-205ENST00000476143 ABCC11Q96J66 1382 aa20.09■□□□□ 0.81
TMCO1-205ENST00000476143 TMEM132EQ6IEE7 984 aa20.09■□□□□ 0.81
TMCO1-205ENST00000476143 C14orf93Q9H972 538 aaKnown RBP20.09■□□□□ 0.81
TMCO1-205ENST00000476143 NRXN1Q9ULB1 1477 aa20.09■□□□□ 0.81
TMCO1-205ENST00000476143 TECPR2O15040 1411 aa20.09■□□□□ 0.81
TMCO1-205ENST00000476143 YTHDC2Q9H6S0 1430 aaKnown RBP20.09■□□□□ 0.81
TMCO1-205ENST00000476143 SPATA31A6Q5VVP1 1343 aa20.07■□□□□ 0.8
TMCO1-205ENST00000476143 NHSL1Q5SYE7 1610 aa20.07■□□□□ 0.8
TMCO1-205ENST00000476143 DCAF11Q8TEB1 546 aa20.07■□□□□ 0.8
TMCO1-205ENST00000476143 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
TMCO1-205ENST00000476143 C1orf167Q5SNV9 1468 aa20.06■□□□□ 0.8
TMCO1-205ENST00000476143 SOCS7O14512 581 aa20.06■□□□□ 0.8
TMCO1-205ENST00000476143 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms