RNA–Protein interactions for RNA: ENST00000475213.1

SSR1-205, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3

Gene SSR1, Length 446 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-205ENST00000475213 E9PCH4 1651 aa18.66■□□□□ 0.58
SSR1-205ENST00000475213 EID1Q9Y6B2 187 aa18.65■□□□□ 0.58
SSR1-205ENST00000475213 STRCP1A6NGW2 1772 aa18.65■□□□□ 0.58
SSR1-205ENST00000475213 ADGRB3O60242 1522 aa18.64■□□□□ 0.58
SSR1-205ENST00000475213 MYO5BQ9ULV0 1848 aa18.63■□□□□ 0.57
SSR1-205ENST00000475213 UBAP1LF5GYI3 381 aa18.63■□□□□ 0.57
SSR1-205ENST00000475213 NUP155O75694 1391 aa18.63■□□□□ 0.57
SSR1-205ENST00000475213 TMEM131LA2VDJ0 1609 aa18.58■□□□□ 0.56
SSR1-205ENST00000475213 NAIPQ13075 1403 aa18.57■□□□□ 0.56
SSR1-205ENST00000475213 LRRC7Q96NW7 1537 aa18.56■□□□□ 0.56
SSR1-205ENST00000475213 ZFYVE9O95405 1425 aa18.54■□□□□ 0.56
SSR1-205ENST00000475213 TOM1O60784 492 aa18.53■□□□□ 0.56
SSR1-205ENST00000475213 SPHKAPQ2M3C7 1700 aa18.52■□□□□ 0.56
SSR1-205ENST00000475213 RIMS2Q9UQ26 1411 aa18.52■□□□□ 0.56
SSR1-205ENST00000475213 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
SSR1-205ENST00000475213 XIRP1Q702N8 1843 aaKnown RBP18.51■□□□□ 0.55
SSR1-205ENST00000475213 HFM1A2PYH4 1435 aa18.51■□□□□ 0.55
SSR1-205ENST00000475213 SLC26A8Q96RN1 970 aa18.51■□□□□ 0.55
SSR1-205ENST00000475213 RNF39Q9H2S5 420 aa18.51■□□□□ 0.55
SSR1-205ENST00000475213 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
SSR1-205ENST00000475213 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
SSR1-205ENST00000475213 PIP4K2BP78356 416 aa18.49■□□□□ 0.55
SSR1-205ENST00000475213 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
SSR1-205ENST00000475213 PPP1R15AO75807 674 aaPredicted RBP18.48■□□□□ 0.55
SSR1-205ENST00000475213 BCANQ96GW7 911 aa18.48■□□□□ 0.55
SSR1-205ENST00000475213 KCNA6P17658 529 aa18.47■□□□□ 0.55
SSR1-205ENST00000475213 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.46■□□□□ 0.55
SSR1-205ENST00000475213 NUTM2DQ5VT03 806 aaPredicted RBP18.45■□□□□ 0.54
SSR1-205ENST00000475213 NWD1Q149M9 1564 aa18.45■□□□□ 0.54
SSR1-205ENST00000475213 CHD2O14647 1828 aaKnown RBP18.44■□□□□ 0.54
SSR1-205ENST00000475213 TRIM52Q96A61 297 aa18.44■□□□□ 0.54
SSR1-205ENST00000475213 CLTCL1P53675 1640 aa18.42■□□□□ 0.54
SSR1-205ENST00000475213 HSPA1LP34931 641 aa18.42■□□□□ 0.54
SSR1-205ENST00000475213 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
SSR1-205ENST00000475213 TRPM2O94759 1503 aa18.42■□□□□ 0.54
SSR1-205ENST00000475213 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
SSR1-205ENST00000475213 NKTRP30414 1462 aaKnown RBP18.41■□□□□ 0.54
SSR1-205ENST00000475213 PROSER2Q86WR7 435 aaPredicted RBP18.41■□□□□ 0.54
SSR1-205ENST00000475213 ADAMTS13Q76LX8 1427 aa18.4■□□□□ 0.54
SSR1-205ENST00000475213 KIF1BO60333 1816 aa18.4■□□□□ 0.54
SSR1-205ENST00000475213 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
SSR1-205ENST00000475213 DISP3Q9P2K9 1392 aa18.4■□□□□ 0.54
SSR1-205ENST00000475213 DIP2AQ14689 1571 aa18.39■□□□□ 0.53
SSR1-205ENST00000475213 ZNF326Q5BKZ1 582 aaKnown RBP18.38■□□□□ 0.53
SSR1-205ENST00000475213 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
SSR1-205ENST00000475213 SLC4A1APQ9BWU0 796 aaKnown RBP18.38■□□□□ 0.53
SSR1-205ENST00000475213 NRXN3Q9Y4C0 1643 aa18.35■□□□□ 0.53
SSR1-205ENST00000475213 PIK3R4Q99570 1358 aa18.34■□□□□ 0.53
SSR1-205ENST00000475213 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
SSR1-205ENST00000475213 NEXMIFQ5QGS0 1516 aa18.33■□□□□ 0.53
SSR1-205ENST00000475213 PTPRUQ92729 1446 aa18.31■□□□□ 0.52
SSR1-205ENST00000475213 MSH6P52701 1360 aa18.3■□□□□ 0.52
SSR1-205ENST00000475213 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
SSR1-205ENST00000475213 NCOA3Q9Y6Q9 1424 aa18.29■□□□□ 0.52
SSR1-205ENST00000475213 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
SSR1-205ENST00000475213 AMOTL2Q9Y2J4 779 aa18.28■□□□□ 0.52
SSR1-205ENST00000475213 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
SSR1-205ENST00000475213 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
SSR1-205ENST00000475213 ILDR2Q71H61 639 aa18.27■□□□□ 0.52
SSR1-205ENST00000475213 XRN1Q8IZH2 1706 aaKnown RBP18.26■□□□□ 0.51
SSR1-205ENST00000475213 MED1Q15648 1581 aaPredicted RBP18.26■□□□□ 0.51
SSR1-205ENST00000475213 PPLO60437 1756 aa18.26■□□□□ 0.51
SSR1-205ENST00000475213 METP08581 1390 aa18.26■□□□□ 0.51
SSR1-205ENST00000475213 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.25■□□□□ 0.51
SSR1-205ENST00000475213 RPGRIP1LQ68CZ1 1315 aa18.24■□□□□ 0.51
SSR1-205ENST00000475213 C14orf37Q86TY3 774 aa18.24■□□□□ 0.51
SSR1-205ENST00000475213 ACIN1Q9UKV3 1341 aaKnown RBP18.23■□□□□ 0.51
SSR1-205ENST00000475213 VGFO15240 615 aaPredicted RBP18.23■□□□□ 0.51
SSR1-205ENST00000475213 SLAIN2Q9P270 581 aa18.23■□□□□ 0.51
SSR1-205ENST00000475213 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
SSR1-205ENST00000475213 C1QBPQ07021 282 aaKnown RBP18.22■□□□□ 0.51
SSR1-205ENST00000475213 SETD1AO15047 1707 aaKnown RBP18.22■□□□□ 0.51
SSR1-205ENST00000475213 RAB3GAP2Q9H2M9 1393 aa18.21■□□□□ 0.51
SSR1-205ENST00000475213 C19orf44Q9H6X5 657 aa18.21■□□□□ 0.51
SSR1-205ENST00000475213 CADPS2Q86UW7 1296 aa18.19■□□□□ 0.5
SSR1-205ENST00000475213 SPATA31E1Q6ZUB1 1445 aa18.18■□□□□ 0.5
SSR1-205ENST00000475213 ATF3P18847 181 aa18.18■□□□□ 0.5
SSR1-205ENST00000475213 IFT172Q9UG01 1749 aa18.18■□□□□ 0.5
SSR1-205ENST00000475213 RGL3Q3MIN7 710 aa18.17■□□□□ 0.5
SSR1-205ENST00000475213 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
SSR1-205ENST00000475213 DCCP43146 1447 aa18.15■□□□□ 0.5
SSR1-205ENST00000475213 ADGRF5Q8IZF2 1346 aa18.14■□□□□ 0.49
SSR1-205ENST00000475213 NALCNQ8IZF0 1738 aa18.13■□□□□ 0.49
SSR1-205ENST00000475213 ANKRD30BQ9BXX2 1392 aa18.12■□□□□ 0.49
SSR1-205ENST00000475213 PTCH1Q13635 1447 aa18.12■□□□□ 0.49
SSR1-205ENST00000475213 ADGRL3Q9HAR2 1447 aa18.12■□□□□ 0.49
SSR1-205ENST00000475213 COL16A1Q07092 1604 aaPredicted RBP18.11■□□□□ 0.49
SSR1-205ENST00000475213 PRAG1Q86YV5 1406 aa18.1■□□□□ 0.49
SSR1-205ENST00000475213 ROBO2Q9HCK4 1378 aa18.1■□□□□ 0.49
SSR1-205ENST00000475213 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
SSR1-205ENST00000475213 MST1RQ04912 1400 aa18.09■□□□□ 0.49
SSR1-205ENST00000475213 SOCS7O14512 581 aa18.09■□□□□ 0.49
SSR1-205ENST00000475213 BRINP3Q76B58 766 aa18.09■□□□□ 0.49
SSR1-205ENST00000475213 HRCP23327 699 aa18.08■□□□□ 0.48
SSR1-205ENST00000475213 PIK3C2GO75747 1445 aa18.07■□□□□ 0.48
SSR1-205ENST00000475213 JCADQ9P266 1359 aa18.06■□□□□ 0.48
SSR1-205ENST00000475213 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
SSR1-205ENST00000475213 NHSL1Q5SYE7 1610 aa18.03■□□□□ 0.48
SSR1-205ENST00000475213 RGS17Q9UGC6 210 aaPredicted RBP18.03■□□□□ 0.48
SSR1-205ENST00000475213 MYOM2P54296 1465 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms