RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 RIMS2Q9UQ26 1411 aa24.07■■□□□ 1.44
SRM-204ENST00000475189 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
SRM-204ENST00000475189 ZNF335Q9H4Z2 1342 aaPredicted RBP24.06■■□□□ 1.44
SRM-204ENST00000475189 HDGFP51858 240 aaKnown RBP24.02■■□□□ 1.44
SRM-204ENST00000475189 CERKQ8TCT0 537 aa24.02■■□□□ 1.44
SRM-204ENST00000475189 ABCF1Q8NE71 845 aaKnown RBP eCLIP24■■□□□ 1.43
SRM-204ENST00000475189 ZNF326Q5BKZ1 582 aaKnown RBP23.98■■□□□ 1.43
SRM-204ENST00000475189 NUTM2DQ5VT03 806 aaPredicted RBP23.98■■□□□ 1.43
SRM-204ENST00000475189 CCDC144AA2RUR9 1427 aa23.97■■□□□ 1.43
SRM-204ENST00000475189 PPP1R15AO75807 674 aaPredicted RBP23.97■■□□□ 1.43
SRM-204ENST00000475189 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
SRM-204ENST00000475189 PLEKHG1Q9ULL1 1385 aa23.97■■□□□ 1.43
SRM-204ENST00000475189 STRCP1A6NGW2 1772 aa23.96■■□□□ 1.43
SRM-204ENST00000475189 NEXMIFQ5QGS0 1516 aa23.94■■□□□ 1.42
SRM-204ENST00000475189 SLC26A8Q96RN1 970 aa23.94■■□□□ 1.42
SRM-204ENST00000475189 BCANQ96GW7 911 aa23.93■■□□□ 1.42
SRM-204ENST00000475189 SENP3Q9H4L4 574 aaPredicted RBP23.93■■□□□ 1.42
SRM-204ENST00000475189 CPS1P31327 1500 aa23.91■■□□□ 1.42
SRM-204ENST00000475189 ANKRD30BQ9BXX2 1392 aa23.91■■□□□ 1.42
SRM-204ENST00000475189 PPLO60437 1756 aa23.89■■□□□ 1.42
SRM-204ENST00000475189 SPATA31E1Q6ZUB1 1445 aa23.89■■□□□ 1.41
SRM-204ENST00000475189 IQSEC2Q5JU85 1478 aa23.88■■□□□ 1.41
SRM-204ENST00000475189 RPGRIP1LQ68CZ1 1315 aa23.88■■□□□ 1.41
SRM-204ENST00000475189 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
SRM-204ENST00000475189 NRXN3Q9Y4C0 1643 aa23.87■■□□□ 1.41
SRM-204ENST00000475189 TBX22Q9Y458 520 aa23.86■■□□□ 1.41
SRM-204ENST00000475189 CHD2O14647 1828 aaKnown RBP23.85■■□□□ 1.41
SRM-204ENST00000475189 DIP2AQ14689 1571 aa23.85■■□□□ 1.41
SRM-204ENST00000475189 SETBP1Q9Y6X0 1596 aa23.85■■□□□ 1.41
SRM-204ENST00000475189 KCNA6P17658 529 aa23.84■■□□□ 1.41
SRM-204ENST00000475189 RGL3Q3MIN7 710 aa23.84■■□□□ 1.41
SRM-204ENST00000475189 IFT172Q9UG01 1749 aa23.83■■□□□ 1.41
SRM-204ENST00000475189 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
SRM-204ENST00000475189 LRRC7Q96NW7 1537 aa23.82■■□□□ 1.4
SRM-204ENST00000475189 NWD1Q149M9 1564 aa23.82■■□□□ 1.4
SRM-204ENST00000475189 XIRP1Q702N8 1843 aaKnown RBP23.79■■□□□ 1.4
SRM-204ENST00000475189 PIK3R4Q99570 1358 aa23.78■■□□□ 1.4
SRM-204ENST00000475189 ADGRF5Q8IZF2 1346 aa23.75■■□□□ 1.39
SRM-204ENST00000475189 SETD1AO15047 1707 aaKnown RBP23.75■■□□□ 1.39
SRM-204ENST00000475189 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
SRM-204ENST00000475189 PTPRUQ92729 1446 aa23.74■■□□□ 1.39
SRM-204ENST00000475189 ALKQ9UM73 1620 aa23.73■■□□□ 1.39
SRM-204ENST00000475189 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
SRM-204ENST00000475189 METP08581 1390 aa23.72■■□□□ 1.39
SRM-204ENST00000475189 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
SRM-204ENST00000475189 DHX57Q6P158 1386 aaKnown RBP23.7■■□□□ 1.38
SRM-204ENST00000475189 UBAP1LF5GYI3 381 aa23.7■■□□□ 1.38
SRM-204ENST00000475189 AMOTL2Q9Y2J4 779 aa23.7■■□□□ 1.38
SRM-204ENST00000475189 XRN1Q8IZH2 1706 aaKnown RBP23.69■■□□□ 1.38
SRM-204ENST00000475189 RBM33Q96EV2 1170 aaKnown RBP23.68■■□□□ 1.38
SRM-204ENST00000475189 MYOM2P54296 1465 aa23.68■■□□□ 1.38
SRM-204ENST00000475189 NRXN1Q9ULB1 1477 aa23.66■■□□□ 1.38
SRM-204ENST00000475189 PIK3C2GO75747 1445 aa23.66■■□□□ 1.38
SRM-204ENST00000475189 TOM1O60784 492 aa23.64■■□□□ 1.37
SRM-204ENST00000475189 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
SRM-204ENST00000475189 NCOA3Q9Y6Q9 1424 aa23.61■■□□□ 1.37
SRM-204ENST00000475189 PCGF6Q9BYE7 350 aa23.61■■□□□ 1.37
SRM-204ENST00000475189 KDM2AQ9Y2K7 1162 aa23.6■■□□□ 1.37
SRM-204ENST00000475189 STAC3Q96MF2 364 aa23.59■■□□□ 1.37
SRM-204ENST00000475189 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
SRM-204ENST00000475189 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.37
SRM-204ENST00000475189 ASXL1Q8IXJ9 1541 aa23.58■■□□□ 1.36
SRM-204ENST00000475189 LAMC1P11047 1609 aa23.57■■□□□ 1.36
SRM-204ENST00000475189 MSH6P52701 1360 aa23.56■■□□□ 1.36
SRM-204ENST00000475189 PIP4K2BP78356 416 aa23.56■■□□□ 1.36
SRM-204ENST00000475189 CFAP70Q5T0N1 1121 aa23.56■■□□□ 1.36
SRM-204ENST00000475189 PRAG1Q86YV5 1406 aa23.56■■□□□ 1.36
SRM-204ENST00000475189 TMEM132EQ6IEE7 984 aa23.55■■□□□ 1.36
SRM-204ENST00000475189 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.55■■□□□ 1.36
SRM-204ENST00000475189 PTCH1Q13635 1447 aa23.54■■□□□ 1.36
SRM-204ENST00000475189 SCAF1Q9H7N4 1312 aaKnown RBP23.54■■□□□ 1.36
SRM-204ENST00000475189 ROBO2Q9HCK4 1378 aa23.53■■□□□ 1.36
SRM-204ENST00000475189 NEUROD1Q13562 356 aa23.53■■□□□ 1.36
SRM-204ENST00000475189 C14orf37Q86TY3 774 aa23.53■■□□□ 1.36
SRM-204ENST00000475189 C19orf44Q9H6X5 657 aa23.52■■□□□ 1.36
SRM-204ENST00000475189 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
SRM-204ENST00000475189 KNDC1Q76NI1 1749 aa23.51■■□□□ 1.35
SRM-204ENST00000475189 STK26Q9P289 416 aa23.5■■□□□ 1.35
SRM-204ENST00000475189 ABCC11Q96J66 1382 aa23.5■■□□□ 1.35
SRM-204ENST00000475189 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
SRM-204ENST00000475189 TECPR2O15040 1411 aa23.5■■□□□ 1.35
SRM-204ENST00000475189 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
SRM-204ENST00000475189 NALCNQ8IZF0 1738 aa23.49■■□□□ 1.35
SRM-204ENST00000475189 L3MBTL2Q969R5 705 aa23.48■■□□□ 1.35
SRM-204ENST00000475189 ADGRL3Q9HAR2 1447 aa23.47■■□□□ 1.35
SRM-204ENST00000475189 ADGRB1O14514 1584 aa23.47■■□□□ 1.35
SRM-204ENST00000475189 DCCP43146 1447 aa23.45■■□□□ 1.34
SRM-204ENST00000475189 ILDR2Q71H61 639 aa23.45■■□□□ 1.34
SRM-204ENST00000475189 CADPS2Q86UW7 1296 aa23.45■■□□□ 1.34
SRM-204ENST00000475189 SLAIN2Q9P270 581 aa23.45■■□□□ 1.34
SRM-204ENST00000475189 FAM135BQ49AJ0 1406 aa23.44■■□□□ 1.34
SRM-204ENST00000475189 ATF3P18847 181 aa23.44■■□□□ 1.34
SRM-204ENST00000475189 KIAA1210Q9ULL0 1709 aa23.44■■□□□ 1.34
SRM-204ENST00000475189 WAPLQ7Z5K2 1190 aa23.43■■□□□ 1.34
SRM-204ENST00000475189 ROBO1Q9Y6N7 1651 aa23.43■■□□□ 1.34
SRM-204ENST00000475189 SIRT1Q96EB6 747 aa23.42■■□□□ 1.34
SRM-204ENST00000475189 HSPA1LP34931 641 aa23.41■■□□□ 1.34
SRM-204ENST00000475189 PLEKHH1Q9ULM0 1364 aa23.4■■□□□ 1.34
SRM-204ENST00000475189 DLC1Q96QB1 1528 aa23.39■■□□□ 1.34
SRM-204ENST00000475189 MST1RQ04912 1400 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms