RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 CERKQ8TCT0 537 aa29.01■■■□□ 2.23
CDHR3-210ENST00000474330 ADGRB3O60242 1522 aa29■■■□□ 2.23
CDHR3-210ENST00000474330 MYO5BQ9ULV0 1848 aa29■■■□□ 2.23
CDHR3-210ENST00000474330 ZNF316A6NFI3 1004 aaPredicted RBP28.99■■■□□ 2.23
CDHR3-210ENST00000474330 STAC3Q96MF2 364 aa28.99■■■□□ 2.23
CDHR3-210ENST00000474330 KDM2AQ9Y2K7 1162 aa28.99■■■□□ 2.23
CDHR3-210ENST00000474330 LTBP4Q8N2S1 1624 aa28.99■■■□□ 2.23
CDHR3-210ENST00000474330 TMEM131LA2VDJ0 1609 aa28.97■■■□□ 2.23
CDHR3-210ENST00000474330 KDM5AP29375 1690 aaKnown RBP28.96■■■□□ 2.23
CDHR3-210ENST00000474330 MED14O60244 1454 aa28.96■■■□□ 2.23
CDHR3-210ENST00000474330 ARHGAP23Q9P227 1491 aa28.94■■■□□ 2.22
CDHR3-210ENST00000474330 PRAG1Q86YV5 1406 aa28.94■■■□□ 2.22
CDHR3-210ENST00000474330 SLIT1O75093 1534 aa28.94■■■□□ 2.22
CDHR3-210ENST00000474330 ZNF335Q9H4Z2 1342 aaPredicted RBP28.93■■■□□ 2.22
CDHR3-210ENST00000474330 ZNF326Q5BKZ1 582 aaKnown RBP28.93■■■□□ 2.22
CDHR3-210ENST00000474330 FBXO41Q8TF61 875 aa28.93■■■□□ 2.22
CDHR3-210ENST00000474330 IFT172Q9UG01 1749 aa28.93■■■□□ 2.22
CDHR3-210ENST00000474330 CHGAP10645 457 aaKnown RBP28.92■■■□□ 2.22
CDHR3-210ENST00000474330 LTKP29376 864 aa28.92■■■□□ 2.22
CDHR3-210ENST00000474330 NPHP4O75161 1426 aaPredicted RBP28.9■■■□□ 2.22
CDHR3-210ENST00000474330 RALGAPBQ86X10 1494 aa28.9■■■□□ 2.22
CDHR3-210ENST00000474330 IQGAP1P46940 1657 aa28.89■■■□□ 2.22
CDHR3-210ENST00000474330 TMEM2Q9UHN6 1383 aa28.88■■■□□ 2.21
CDHR3-210ENST00000474330 RPGRIP1LQ68CZ1 1315 aa28.88■■■□□ 2.21
CDHR3-210ENST00000474330 PPLO60437 1756 aa28.88■■■□□ 2.21
CDHR3-210ENST00000474330 STAG3Q9UJ98 1225 aa28.87■■■□□ 2.21
CDHR3-210ENST00000474330 MYOM2P54296 1465 aa28.87■■■□□ 2.21
CDHR3-210ENST00000474330 TRPM1Q7Z4N2 1603 aa28.87■■■□□ 2.21
CDHR3-210ENST00000474330 TXNDC2Q86VQ3 553 aa28.87■■■□□ 2.21
CDHR3-210ENST00000474330 SCAF11Q99590 1463 aaKnown RBP28.86■■■□□ 2.21
CDHR3-210ENST00000474330 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
CDHR3-210ENST00000474330 EIF4G2P78344 907 aaKnown RBP eCLIP28.8■■■□□ 2.2
CDHR3-210ENST00000474330 EID1Q9Y6B2 187 aa28.8■■■□□ 2.2
CDHR3-210ENST00000474330 NRXN1Q9ULB1 1477 aa28.79■■■□□ 2.2
CDHR3-210ENST00000474330 KIAA1210Q9ULL0 1709 aa28.76■■■□□ 2.2
CDHR3-210ENST00000474330 ROCK2O75116 1388 aaKnown RBP28.76■■■□□ 2.19
CDHR3-210ENST00000474330 ADGRF5Q8IZF2 1346 aa28.76■■■□□ 2.19
CDHR3-210ENST00000474330 STRCP1A6NGW2 1772 aa28.75■■■□□ 2.19
CDHR3-210ENST00000474330 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
CDHR3-210ENST00000474330 HSPA5P11021 654 aaKnown RBP28.75■■■□□ 2.19
CDHR3-210ENST00000474330 LAMC1P11047 1609 aa28.74■■■□□ 2.19
CDHR3-210ENST00000474330 IQSEC2Q5JU85 1478 aa28.74■■■□□ 2.19
CDHR3-210ENST00000474330 ZFYVE9O95405 1425 aa28.74■■■□□ 2.19
CDHR3-210ENST00000474330 CARD11Q9BXL7 1154 aa28.74■■■□□ 2.19
CDHR3-210ENST00000474330 VGFO15240 615 aaPredicted RBP28.72■■■□□ 2.19
CDHR3-210ENST00000474330 NBPF1Q3BBV0 1214 aa28.72■■■□□ 2.19
CDHR3-210ENST00000474330 RIMS2Q9UQ26 1411 aa28.71■■■□□ 2.19
CDHR3-210ENST00000474330 HIRIP3Q9BW71 556 aaPredicted RBP28.71■■■□□ 2.19
CDHR3-210ENST00000474330 CPS1P31327 1500 aa28.69■■■□□ 2.18
CDHR3-210ENST00000474330 PIK3C2GO75747 1445 aa28.69■■■□□ 2.18
CDHR3-210ENST00000474330 USP47Q96K76 1375 aa28.69■■■□□ 2.18
CDHR3-210ENST00000474330 NUTM2DQ5VT03 806 aaPredicted RBP28.65■■■□□ 2.18
CDHR3-210ENST00000474330 HDGFP51858 240 aaKnown RBP28.65■■■□□ 2.18
CDHR3-210ENST00000474330 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.65■■■□□ 2.18
CDHR3-210ENST00000474330 SLC26A8Q96RN1 970 aa28.64■■■□□ 2.18
CDHR3-210ENST00000474330 CFAP70Q5T0N1 1121 aa28.63■■■□□ 2.17
CDHR3-210ENST00000474330 C14orf93Q9H972 538 aaKnown RBP28.61■■■□□ 2.17
CDHR3-210ENST00000474330 PLEKHG1Q9ULL1 1385 aa28.61■■■□□ 2.17
CDHR3-210ENST00000474330 SENP3Q9H4L4 574 aaPredicted RBP28.61■■■□□ 2.17
CDHR3-210ENST00000474330 SETBP1Q9Y6X0 1596 aa28.6■■■□□ 2.17
CDHR3-210ENST00000474330 LRRC7Q96NW7 1537 aa28.59■■■□□ 2.17
CDHR3-210ENST00000474330 DIEXFQ68CQ4 756 aaKnown RBP28.55■■■□□ 2.16
CDHR3-210ENST00000474330 BCANQ96GW7 911 aa28.54■■■□□ 2.16
CDHR3-210ENST00000474330 XIRP1Q702N8 1843 aaKnown RBP28.54■■■□□ 2.16
CDHR3-210ENST00000474330 NRXN3Q9Y4C0 1643 aa28.54■■■□□ 2.16
CDHR3-210ENST00000474330 ST20-MTHFSA0A0A6YYL1 179 aa28.54■■■□□ 2.16
CDHR3-210ENST00000474330 UBAP1LF5GYI3 381 aa28.54■■■□□ 2.16
CDHR3-210ENST00000474330 ADGRB1O14514 1584 aa28.53■■■□□ 2.16
CDHR3-210ENST00000474330 KCNA6P17658 529 aa28.52■■■□□ 2.16
CDHR3-210ENST00000474330 ADAMTS13Q76LX8 1427 aa28.52■■■□□ 2.16
CDHR3-210ENST00000474330 CHD2O14647 1828 aaKnown RBP28.51■■■□□ 2.15
CDHR3-210ENST00000474330 TBX22Q9Y458 520 aa28.51■■■□□ 2.15
CDHR3-210ENST00000474330 SETD1AO15047 1707 aaKnown RBP28.5■■■□□ 2.15
CDHR3-210ENST00000474330 ALKQ9UM73 1620 aa28.5■■■□□ 2.15
CDHR3-210ENST00000474330 NWD1Q149M9 1564 aa28.47■■■□□ 2.15
CDHR3-210ENST00000474330 C11orf95C9JLR9 678 aaPredicted RBP28.47■■■□□ 2.15
CDHR3-210ENST00000474330 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
CDHR3-210ENST00000474330 EIF3AQ14152 1382 aaKnown RBP28.45■■■□□ 2.15
CDHR3-210ENST00000474330 TMEM132EQ6IEE7 984 aa28.43■■■□□ 2.14
CDHR3-210ENST00000474330 CCDC7Q96M83 1385 aa28.43■■■□□ 2.14
CDHR3-210ENST00000474330 DIP2AQ14689 1571 aa28.43■■■□□ 2.14
CDHR3-210ENST00000474330 ASXL1Q8IXJ9 1541 aa28.42■■■□□ 2.14
CDHR3-210ENST00000474330 TOM1O60784 492 aa28.42■■■□□ 2.14
CDHR3-210ENST00000474330 TESK2Q96S53 571 aa28.42■■■□□ 2.14
CDHR3-210ENST00000474330 RBM33Q96EV2 1170 aaKnown RBP28.4■■■□□ 2.14
CDHR3-210ENST00000474330 KIF7Q2M1P5 1343 aa28.4■■■□□ 2.14
CDHR3-210ENST00000474330 DDX10Q13206 875 aaKnown RBP28.4■■■□□ 2.14
CDHR3-210ENST00000474330 TMEM94Q12767 1356 aa28.39■■■□□ 2.14
CDHR3-210ENST00000474330 PROSER2Q86WR7 435 aaPredicted RBP28.39■■■□□ 2.13
CDHR3-210ENST00000474330 NKTRP30414 1462 aaKnown RBP28.38■■■□□ 2.13
CDHR3-210ENST00000474330 PIK3R4Q99570 1358 aa28.37■■■□□ 2.13
CDHR3-210ENST00000474330 PIP4K2BP78356 416 aa28.36■■■□□ 2.13
CDHR3-210ENST00000474330 TRAK1Q9UPV9 953 aa28.36■■■□□ 2.13
CDHR3-210ENST00000474330 PTPRUQ92729 1446 aa28.35■■■□□ 2.13
CDHR3-210ENST00000474330 ARHGEF28Q8N1W1 1705 aaKnown RBP28.34■■■□□ 2.13
CDHR3-210ENST00000474330 YTHDC2Q9H6S0 1430 aaKnown RBP28.33■■■□□ 2.13
CDHR3-210ENST00000474330 SLC24A1O60721 1099 aa28.32■■■□□ 2.12
CDHR3-210ENST00000474330 METP08581 1390 aa28.32■■■□□ 2.12
CDHR3-210ENST00000474330 TMF1P82094 1093 aa28.32■■■□□ 2.12
CDHR3-210ENST00000474330 SBNO2Q9Y2G9 1366 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms