RNA–Protein interactions for RNA: ENST00000474305.2

CASP9-209, Transcript of caspase 9, humanhuman

TSL 1 (best)

Gene CASP9, Length 1,111 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9-209ENST00000474305 NEURL4Q96JN8 1562 aa27.14■■□□□ 1.94
CASP9-209ENST00000474305 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.13■■□□□ 1.93
CASP9-209ENST00000474305 RIMS2Q9UQ26 1411 aa27.13■■□□□ 1.93
CASP9-209ENST00000474305 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
CASP9-209ENST00000474305 NPHP4O75161 1426 aaPredicted RBP27.1■■□□□ 1.93
CASP9-209ENST00000474305 ZNF326Q5BKZ1 582 aaKnown RBP27.1■■□□□ 1.93
CASP9-209ENST00000474305 SPATA31E1Q6ZUB1 1445 aa27.09■■□□□ 1.93
CASP9-209ENST00000474305 RPGRIP1LQ68CZ1 1315 aa27.09■■□□□ 1.93
CASP9-209ENST00000474305 IQGAP1P46940 1657 aa27.05■■□□□ 1.92
CASP9-209ENST00000474305 NEXMIFQ5QGS0 1516 aa27.03■■□□□ 1.92
CASP9-209ENST00000474305 PLEKHG1Q9ULL1 1385 aa27.03■■□□□ 1.92
CASP9-209ENST00000474305 PPP1R15AO75807 674 aaPredicted RBP27.02■■□□□ 1.92
CASP9-209ENST00000474305 RGL3Q3MIN7 710 aa27.02■■□□□ 1.92
CASP9-209ENST00000474305 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
CASP9-209ENST00000474305 VGFO15240 615 aaPredicted RBP27■■□□□ 1.91
CASP9-209ENST00000474305 PPLO60437 1756 aa26.98■■□□□ 1.91
CASP9-209ENST00000474305 TBX22Q9Y458 520 aa26.94■■□□□ 1.9
CASP9-209ENST00000474305 IFT172Q9UG01 1749 aa26.93■■□□□ 1.9
CASP9-209ENST00000474305 BCANQ96GW7 911 aa26.93■■□□□ 1.9
CASP9-209ENST00000474305 SLC26A8Q96RN1 970 aa26.93■■□□□ 1.9
CASP9-209ENST00000474305 SIN3AQ96ST3 1273 aa26.91■■□□□ 1.9
CASP9-209ENST00000474305 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
CASP9-209ENST00000474305 SETBP1Q9Y6X0 1596 aa26.9■■□□□ 1.9
CASP9-209ENST00000474305 STAC3Q96MF2 364 aa26.9■■□□□ 1.9
CASP9-209ENST00000474305 ZNF335Q9H4Z2 1342 aaPredicted RBP26.9■■□□□ 1.9
CASP9-209ENST00000474305 ADGRF5Q8IZF2 1346 aa26.88■■□□□ 1.89
CASP9-209ENST00000474305 LTBP4Q8N2S1 1624 aa26.87■■□□□ 1.89
CASP9-209ENST00000474305 NRXN3Q9Y4C0 1643 aa26.87■■□□□ 1.89
CASP9-209ENST00000474305 SENP3Q9H4L4 574 aaPredicted RBP26.87■■□□□ 1.89
CASP9-209ENST00000474305 DIP2AQ14689 1571 aa26.86■■□□□ 1.89
CASP9-209ENST00000474305 MYOM2P54296 1465 aa26.83■■□□□ 1.89
CASP9-209ENST00000474305 KCNA6P17658 529 aa26.83■■□□□ 1.89
CASP9-209ENST00000474305 NEUROD1Q13562 356 aa26.83■■□□□ 1.89
CASP9-209ENST00000474305 DCAF11Q8TEB1 546 aa26.83■■□□□ 1.89
CASP9-209ENST00000474305 PIK3R4Q99570 1358 aa26.83■■□□□ 1.88
CASP9-209ENST00000474305 NRXN1Q9ULB1 1477 aa26.82■■□□□ 1.88
CASP9-209ENST00000474305 CHD2O14647 1828 aaKnown RBP26.81■■□□□ 1.88
CASP9-209ENST00000474305 STRCP1A6NGW2 1772 aa26.81■■□□□ 1.88
CASP9-209ENST00000474305 CLSPNQ9HAW4 1339 aa26.8■■□□□ 1.88
CASP9-209ENST00000474305 PIK3C2GO75747 1445 aa26.79■■□□□ 1.88
CASP9-209ENST00000474305 CPS1P31327 1500 aa26.79■■□□□ 1.88
CASP9-209ENST00000474305 ALKQ9UM73 1620 aa26.79■■□□□ 1.88
CASP9-209ENST00000474305 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
CASP9-209ENST00000474305 CERKQ8TCT0 537 aa26.77■■□□□ 1.88
CASP9-209ENST00000474305 L3MBTL2Q969R5 705 aa26.77■■□□□ 1.88
CASP9-209ENST00000474305 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.88
CASP9-209ENST00000474305 METP08581 1390 aa26.76■■□□□ 1.87
CASP9-209ENST00000474305 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
CASP9-209ENST00000474305 NWD1Q149M9 1564 aa26.75■■□□□ 1.87
CASP9-209ENST00000474305 PTPRUQ92729 1446 aa26.73■■□□□ 1.87
CASP9-209ENST00000474305 AMOTL2Q9Y2J4 779 aa26.72■■□□□ 1.87
CASP9-209ENST00000474305 CFAP70Q5T0N1 1121 aa26.7■■□□□ 1.86
CASP9-209ENST00000474305 LRRC7Q96NW7 1537 aa26.7■■□□□ 1.86
CASP9-209ENST00000474305 CCER1Q8TC90 406 aaPredicted RBP26.69■■□□□ 1.86
CASP9-209ENST00000474305 NKTRP30414 1462 aaKnown RBP26.68■■□□□ 1.86
CASP9-209ENST00000474305 IQSEC2Q5JU85 1478 aa26.68■■□□□ 1.86
CASP9-209ENST00000474305 LAMC1P11047 1609 aa26.66■■□□□ 1.86
CASP9-209ENST00000474305 PROSER2Q86WR7 435 aaPredicted RBP26.66■■□□□ 1.86
CASP9-209ENST00000474305 XRN1Q8IZH2 1706 aaKnown RBP26.65■■□□□ 1.86
CASP9-209ENST00000474305 TONSLQ96HA7 1378 aa26.64■■□□□ 1.86
CASP9-209ENST00000474305 TMEM132EQ6IEE7 984 aa26.64■■□□□ 1.86
CASP9-209ENST00000474305 PRAG1Q86YV5 1406 aa26.64■■□□□ 1.85
CASP9-209ENST00000474305 TIMELESSQ9UNS1 1208 aa26.62■■□□□ 1.85
CASP9-209ENST00000474305 XIRP1Q702N8 1843 aaKnown RBP26.62■■□□□ 1.85
CASP9-209ENST00000474305 LRPPRCP42704 1394 aaKnown RBP26.61■■□□□ 1.85
CASP9-209ENST00000474305 ASXL1Q8IXJ9 1541 aa26.61■■□□□ 1.85
CASP9-209ENST00000474305 TMEM94Q12767 1356 aa26.6■■□□□ 1.85
CASP9-209ENST00000474305 ABCC11Q96J66 1382 aa26.6■■□□□ 1.85
CASP9-209ENST00000474305 KIAA1210Q9ULL0 1709 aa26.6■■□□□ 1.85
CASP9-209ENST00000474305 NCOA3Q9Y6Q9 1424 aa26.6■■□□□ 1.85
CASP9-209ENST00000474305 YTHDC2Q9H6S0 1430 aaKnown RBP26.57■■□□□ 1.84
CASP9-209ENST00000474305 SIRT1Q96EB6 747 aa26.57■■□□□ 1.84
CASP9-209ENST00000474305 ADGRB1O14514 1584 aa26.57■■□□□ 1.84
CASP9-209ENST00000474305 TECPR2O15040 1411 aa26.56■■□□□ 1.84
CASP9-209ENST00000474305 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
CASP9-209ENST00000474305 RBM33Q96EV2 1170 aaKnown RBP26.56■■□□□ 1.84
CASP9-209ENST00000474305 STK26Q9P289 416 aa26.55■■□□□ 1.84
CASP9-209ENST00000474305 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
CASP9-209ENST00000474305 NBPF8Q3BBV2 869 aa26.53■■□□□ 1.84
CASP9-209ENST00000474305 KNDC1Q76NI1 1749 aa26.53■■□□□ 1.84
CASP9-209ENST00000474305 NBPF1Q3BBV0 1214 aa26.52■■□□□ 1.84
CASP9-209ENST00000474305 C19orf44Q9H6X5 657 aa26.5■■□□□ 1.83
CASP9-209ENST00000474305 FAM135BQ49AJ0 1406 aa26.48■■□□□ 1.83
CASP9-209ENST00000474305 TRPM1Q7Z4N2 1603 aa26.48■■□□□ 1.83
CASP9-209ENST00000474305 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
CASP9-209ENST00000474305 TOM1O60784 492 aa26.47■■□□□ 1.83
CASP9-209ENST00000474305 DLC1Q96QB1 1528 aa26.47■■□□□ 1.83
CASP9-209ENST00000474305 MSH6P52701 1360 aa26.46■■□□□ 1.83
CASP9-209ENST00000474305 UBAP1LF5GYI3 381 aa26.46■■□□□ 1.83
CASP9-209ENST00000474305 WAPLQ7Z5K2 1190 aa26.46■■□□□ 1.83
CASP9-209ENST00000474305 C14orf37Q86TY3 774 aa26.45■■□□□ 1.82
CASP9-209ENST00000474305 TRAK1Q9UPV9 953 aa26.45■■□□□ 1.82
CASP9-209ENST00000474305 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.42■■□□□ 1.82
CASP9-209ENST00000474305 ADGRL3Q9HAR2 1447 aa26.42■■□□□ 1.82
CASP9-209ENST00000474305 PLEKHH1Q9ULM0 1364 aa26.41■■□□□ 1.82
CASP9-209ENST00000474305 CADPS2Q86UW7 1296 aa26.4■■□□□ 1.82
CASP9-209ENST00000474305 PRAM1Q96QH2 718 aa26.4■■□□□ 1.82
CASP9-209ENST00000474305 GPRASP1Q5JY77 1395 aa26.4■■□□□ 1.82
CASP9-209ENST00000474305 DCCP43146 1447 aa26.39■■□□□ 1.82
CASP9-209ENST00000474305 ROCK2O75116 1388 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms