RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 ABCA5Q8WWZ7 1642 aa8.53□□□□□ -1.04
SMARCE1-208ENST00000474246 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-208ENST00000474246 UACAQ9BZF9 1416 aa8.53□□□□□ -1.04
SMARCE1-208ENST00000474246 TNIKQ9UKE5 1360 aa8.52□□□□□ -1.05
SMARCE1-208ENST00000474246 PPM1GO15355 546 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 ERICH6BQ5W0A0 696 aa8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 PYGBP11216 843 aa8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 NEUROD2Q15784 382 aa8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 TMED8Q6PL24 325 aaPredicted RBP8.51□□□□□ -1.05
SMARCE1-208ENST00000474246 FAM135BQ49AJ0 1406 aa8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 RUSC2Q8N2Y8 1516 aa8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 FOXD4L5Q5VV16 416 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 TSPYL2Q9H2G4 693 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 SETQ01105 290 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 JCADQ9P266 1359 aa8.5□□□□□ -1.05
SMARCE1-208ENST00000474246 RGS12O14924 1447 aa8.49□□□□□ -1.05
SMARCE1-208ENST00000474246 E9PSI1 815 aa8.49□□□□□ -1.05
SMARCE1-208ENST00000474246 RBM6P78332 1123 aaKnown RBP8.49□□□□□ -1.05
SMARCE1-208ENST00000474246 LHX8Q68G74 356 aa8.49□□□□□ -1.05
SMARCE1-208ENST00000474246 WIZO95785 1651 aa8.49□□□□□ -1.05
SMARCE1-208ENST00000474246 RNF17Q9BXT8 1623 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-208ENST00000474246 TCOF1Q13428 1488 aaKnown RBP8.48□□□□□ -1.05
SMARCE1-208ENST00000474246 NEO1Q92859 1461 aa8.48□□□□□ -1.05
SMARCE1-208ENST00000474246 TMCO4Q5TGY1 634 aa8.48□□□□□ -1.05
SMARCE1-208ENST00000474246 TEX2Q8IWB9 1127 aa8.48□□□□□ -1.05
SMARCE1-208ENST00000474246 ABCA10Q8WWZ4 1543 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 RIOK3O14730 519 aaKnown RBP8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 SPATA31A6Q5VVP1 1343 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 ARID3CA6NKF2 412 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 APBB1O00213 710 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 KCNH8Q96L42 1107 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 PLCD4Q9BRC7 762 aa8.47□□□□□ -1.05
SMARCE1-208ENST00000474246 NGLY1Q96IV0 654 aa8.46□□□□□ -1.06
SMARCE1-208ENST00000474246 PRDM16Q9HAZ2 1276 aa8.46□□□□□ -1.06
SMARCE1-208ENST00000474246 PTMSP20962 102 aa8.45□□□□□ -1.06
SMARCE1-208ENST00000474246 RAPGEF2Q9Y4G8 1499 aa8.45□□□□□ -1.06
SMARCE1-208ENST00000474246 ZCCHC11Q5TAX3 1644 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-208ENST00000474246 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
SMARCE1-208ENST00000474246 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
SMARCE1-208ENST00000474246 EFCAB5A4FU69 1503 aa8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 MFAP1P55081 439 aaKnown RBP8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 GLIPR1L2Q4G1C9 344 aa8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 FRMPD1Q5SYB0 1578 aa8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 AATKQ6ZMQ8 1374 aa8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 CHRM1P11229 460 aaPredicted RBP8.44□□□□□ -1.06
SMARCE1-208ENST00000474246 HSPA6P17066 643 aa8.43□□□□□ -1.06
SMARCE1-208ENST00000474246 CCDC27Q2M243 656 aa8.43□□□□□ -1.06
SMARCE1-208ENST00000474246 HS6ST3Q8IZP7 471 aa8.43□□□□□ -1.06
SMARCE1-208ENST00000474246 NWD1Q149M9 1564 aa8.42□□□□□ -1.06
SMARCE1-208ENST00000474246 TRAIPQ9BWF2 469 aa8.42□□□□□ -1.06
SMARCE1-208ENST00000474246 ESF1Q9H501 851 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-208ENST00000474246 MAGI2Q86UL8 1455 aa8.42□□□□□ -1.06
SMARCE1-208ENST00000474246 CDK13Q14004 1512 aaKnown RBP8.42□□□□□ -1.06
SMARCE1-208ENST00000474246 ZNF526Q8TF50 670 aaPredicted RBP8.41□□□□□ -1.06
SMARCE1-208ENST00000474246 ZFYVE16Q7Z3T8 1539 aa8.41□□□□□ -1.06
SMARCE1-208ENST00000474246 STK25O00506 426 aa8.41□□□□□ -1.06
SMARCE1-208ENST00000474246 AEBP1Q8IUX7 1158 aa8.41□□□□□ -1.06
SMARCE1-208ENST00000474246 PSDA5PKW4 1024 aaPredicted RBP8.4□□□□□ -1.06
SMARCE1-208ENST00000474246 VGFO15240 615 aaPredicted RBP8.4□□□□□ -1.06
SMARCE1-208ENST00000474246 SF3B2Q13435 895 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 PRDM10Q9NQV6 1147 aa8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 WWC3Q9ULE0 1092 aa8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 TOP2AP11388 1531 aaKnown RBP8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 DENND4BO75064 1496 aaPredicted RBP8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 CNPY4Q8N129 248 aa8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 FHOD3Q2V2M9 1422 aa8.39□□□□□ -1.07
SMARCE1-208ENST00000474246 NINLQ9Y2I6 1382 aa8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 CCDC61Q9Y6R9 512 aa8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 BCL9LQ86UU0 1499 aa8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 NPATQ14207 1427 aa8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 MAFGO15525 162 aa8.38□□□□□ -1.07
SMARCE1-208ENST00000474246 QTRT2Q9H974 415 aaKnown RBP8.37□□□□□ -1.07
SMARCE1-208ENST00000474246 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
SMARCE1-208ENST00000474246 NKX1-1Q15270 411 aaPredicted RBP8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 GRIPAP1Q4V328 841 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 MCCP23508 829 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 PCDHB8Q9UN66 801 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 PCDHB13Q9Y5F0 798 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 ERICH3Q5RHP9 1530 aa8.36□□□□□ -1.07
SMARCE1-208ENST00000474246 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 LMOD2Q6P5Q4 547 aa8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 SYNMO15061 1565 aa8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 C3P01024 1663 aa8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 AFF2P51816 1311 aa8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 ANAPC15P60006 121 aa8.35□□□□□ -1.07
SMARCE1-208ENST00000474246 FGD6Q6ZV73 1430 aa8.34□□□□□ -1.07
SMARCE1-208ENST00000474246 ZMYM4Q5VZL5 1548 aa8.34□□□□□ -1.07
SMARCE1-208ENST00000474246 LRP6O75581 1613 aa8.34□□□□□ -1.07
SMARCE1-208ENST00000474246 GZF1Q9H116 711 aaPredicted RBP8.34□□□□□ -1.07
SMARCE1-208ENST00000474246 VWDEQ8N2E2 1590 aa8.33□□□□□ -1.08
SMARCE1-208ENST00000474246 PPP1R1BQ9UD71 204 aaPredicted RBP8.33□□□□□ -1.08
SMARCE1-208ENST00000474246 SIGLEC1Q9BZZ2 1709 aa8.33□□□□□ -1.08
SMARCE1-208ENST00000474246 C9orf84Q5VXU9 1444 aa8.33□□□□□ -1.08
SMARCE1-208ENST00000474246 ATP10AO60312 1499 aa8.32□□□□□ -1.08
SMARCE1-208ENST00000474246 KDM4AO75164 1064 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms