RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 CPS1P31327 1500 aa19.54■□□□□ 0.72
BRAT1-205ENST00000473879 STRCP1A6NGW2 1772 aa19.52■□□□□ 0.72
BRAT1-205ENST00000473879 HDGFP51858 240 aaKnown RBP19.52■□□□□ 0.72
BRAT1-205ENST00000473879 ZFYVE9O95405 1425 aa19.51■□□□□ 0.71
BRAT1-205ENST00000473879 CHGAP10645 457 aaKnown RBP19.5■□□□□ 0.71
BRAT1-205ENST00000473879 CCER1Q8TC90 406 aaPredicted RBP19.5■□□□□ 0.71
BRAT1-205ENST00000473879 MPHOSPH9Q99550 1183 aa19.49■□□□□ 0.71
BRAT1-205ENST00000473879 SLC4A1APQ9BWU0 796 aaKnown RBP19.49■□□□□ 0.71
BRAT1-205ENST00000473879 RIMS2Q9UQ26 1411 aa19.49■□□□□ 0.71
BRAT1-205ENST00000473879 DHX57Q6P158 1386 aaKnown RBP19.48■□□□□ 0.71
BRAT1-205ENST00000473879 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.48■□□□□ 0.71
BRAT1-205ENST00000473879 PLEKHG1Q9ULL1 1385 aa19.45■□□□□ 0.7
BRAT1-205ENST00000473879 PPP1R15AO75807 674 aaPredicted RBP19.44■□□□□ 0.7
BRAT1-205ENST00000473879 KIF1BO60333 1816 aa19.44■□□□□ 0.7
BRAT1-205ENST00000473879 SLC26A8Q96RN1 970 aa19.43■□□□□ 0.7
BRAT1-205ENST00000473879 CLSPNQ9HAW4 1339 aa19.43■□□□□ 0.7
BRAT1-205ENST00000473879 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 NEXMIFQ5QGS0 1516 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 LRRC7Q96NW7 1537 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 BCANQ96GW7 911 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 ANKRD30BQ9BXX2 1392 aa19.42■□□□□ 0.7
BRAT1-205ENST00000473879 NWD1Q149M9 1564 aa19.4■□□□□ 0.7
BRAT1-205ENST00000473879 KCNA6P17658 529 aa19.4■□□□□ 0.7
BRAT1-205ENST00000473879 IFT172Q9UG01 1749 aa19.39■□□□□ 0.7
BRAT1-205ENST00000473879 XIRP1Q702N8 1843 aaKnown RBP19.39■□□□□ 0.7
BRAT1-205ENST00000473879 TOM1O60784 492 aa19.38■□□□□ 0.69
BRAT1-205ENST00000473879 FOXD1Q16676 465 aa19.38■□□□□ 0.69
BRAT1-205ENST00000473879 NUTM2DQ5VT03 806 aaPredicted RBP19.38■□□□□ 0.69
BRAT1-205ENST00000473879 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
BRAT1-205ENST00000473879 NRXN3Q9Y4C0 1643 aa19.38■□□□□ 0.69
BRAT1-205ENST00000473879 DIP2AQ14689 1571 aa19.37■□□□□ 0.69
BRAT1-205ENST00000473879 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
BRAT1-205ENST00000473879 ZNF326Q5BKZ1 582 aaKnown RBP19.37■□□□□ 0.69
BRAT1-205ENST00000473879 PPLO60437 1756 aa19.37■□□□□ 0.69
BRAT1-205ENST00000473879 SETBP1Q9Y6X0 1596 aa19.36■□□□□ 0.69
BRAT1-205ENST00000473879 ADAMTS13Q76LX8 1427 aa19.35■□□□□ 0.69
BRAT1-205ENST00000473879 CHD2O14647 1828 aaKnown RBP19.35■□□□□ 0.69
BRAT1-205ENST00000473879 ALKQ9UM73 1620 aa19.34■□□□□ 0.69
BRAT1-205ENST00000473879 ZEB1P37275 1124 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-205ENST00000473879 SENP3Q9H4L4 574 aaPredicted RBP19.34■□□□□ 0.69
BRAT1-205ENST00000473879 NKTRP30414 1462 aaKnown RBP19.33■□□□□ 0.68
BRAT1-205ENST00000473879 PIK3R4Q99570 1358 aa19.32■□□□□ 0.68
BRAT1-205ENST00000473879 SETD1AO15047 1707 aaKnown RBP19.31■□□□□ 0.68
BRAT1-205ENST00000473879 RPGRIP1LQ68CZ1 1315 aa19.3■□□□□ 0.68
BRAT1-205ENST00000473879 PROSER2Q86WR7 435 aaPredicted RBP19.3■□□□□ 0.68
BRAT1-205ENST00000473879 TMEM94Q12767 1356 aa19.3■□□□□ 0.68
BRAT1-205ENST00000473879 NRXN1Q9ULB1 1477 aa19.28■□□□□ 0.68
BRAT1-205ENST00000473879 PIP4K2BP78356 416 aa19.28■□□□□ 0.68
BRAT1-205ENST00000473879 VGFO15240 615 aaPredicted RBP19.27■□□□□ 0.68
BRAT1-205ENST00000473879 MYOM2P54296 1465 aa19.26■□□□□ 0.67
BRAT1-205ENST00000473879 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
BRAT1-205ENST00000473879 XRN1Q8IZH2 1706 aaKnown RBP19.24■□□□□ 0.67
BRAT1-205ENST00000473879 PRAG1Q86YV5 1406 aa19.24■□□□□ 0.67
BRAT1-205ENST00000473879 NCOA3Q9Y6Q9 1424 aa19.24■□□□□ 0.67
BRAT1-205ENST00000473879 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
BRAT1-205ENST00000473879 AMOTL2Q9Y2J4 779 aa19.23■□□□□ 0.67
BRAT1-205ENST00000473879 PTPRUQ92729 1446 aa19.23■□□□□ 0.67
BRAT1-205ENST00000473879 PIK3C2GO75747 1445 aa19.21■□□□□ 0.67
BRAT1-205ENST00000473879 METP08581 1390 aa19.2■□□□□ 0.66
BRAT1-205ENST00000473879 MSH6P52701 1360 aa19.2■□□□□ 0.66
BRAT1-205ENST00000473879 HSPA1LP34931 641 aa19.19■□□□□ 0.66
BRAT1-205ENST00000473879 RGL3Q3MIN7 710 aa19.19■□□□□ 0.66
BRAT1-205ENST00000473879 DISP3Q9P2K9 1392 aa19.19■□□□□ 0.66
BRAT1-205ENST00000473879 ILDR2Q71H61 639 aa19.18■□□□□ 0.66
BRAT1-205ENST00000473879 ASXL1Q8IXJ9 1541 aa19.17■□□□□ 0.66
BRAT1-205ENST00000473879 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
BRAT1-205ENST00000473879 LAMC1P11047 1609 aa19.15■□□□□ 0.66
BRAT1-205ENST00000473879 ADGRF5Q8IZF2 1346 aa19.15■□□□□ 0.66
BRAT1-205ENST00000473879 C19orf44Q9H6X5 657 aa19.14■□□□□ 0.65
BRAT1-205ENST00000473879 C14orf37Q86TY3 774 aa19.13■□□□□ 0.65
BRAT1-205ENST00000473879 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
BRAT1-205ENST00000473879 ROBO1Q9Y6N7 1651 aa19.13■□□□□ 0.65
BRAT1-205ENST00000473879 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.13■□□□□ 0.65
BRAT1-205ENST00000473879 SLAIN2Q9P270 581 aa19.12■□□□□ 0.65
BRAT1-205ENST00000473879 TIMELESSQ9UNS1 1208 aa19.12■□□□□ 0.65
BRAT1-205ENST00000473879 NEUROD1Q13562 356 aa19.11■□□□□ 0.65
BRAT1-205ENST00000473879 CADPS2Q86UW7 1296 aa19.11■□□□□ 0.65
BRAT1-205ENST00000473879 ADGRB1O14514 1584 aa19.1■□□□□ 0.65
BRAT1-205ENST00000473879 TONSLQ96HA7 1378 aa19.1■□□□□ 0.65
BRAT1-205ENST00000473879 STAC3Q96MF2 364 aa19.1■□□□□ 0.65
BRAT1-205ENST00000473879 KNDC1Q76NI1 1749 aa19.1■□□□□ 0.65
BRAT1-205ENST00000473879 TECPR2O15040 1411 aa19.09■□□□□ 0.65
BRAT1-205ENST00000473879 NALCNQ8IZF0 1738 aa19.09■□□□□ 0.65
BRAT1-205ENST00000473879 ATF3P18847 181 aa19.09■□□□□ 0.65
BRAT1-205ENST00000473879 DCCP43146 1447 aa19.08■□□□□ 0.65
BRAT1-205ENST00000473879 PTCH1Q13635 1447 aa19.08■□□□□ 0.65
BRAT1-205ENST00000473879 KIAA1210Q9ULL0 1709 aa19.08■□□□□ 0.64
BRAT1-205ENST00000473879 MED1Q15648 1581 aaPredicted RBP19.06■□□□□ 0.64
BRAT1-205ENST00000473879 ROBO2Q9HCK4 1378 aa19.05■□□□□ 0.64
BRAT1-205ENST00000473879 C14orf93Q9H972 538 aaKnown RBP19.04■□□□□ 0.64
BRAT1-205ENST00000473879 ADGRL3Q9HAR2 1447 aa19.04■□□□□ 0.64
BRAT1-205ENST00000473879 LRPPRCP42704 1394 aaKnown RBP19.02■□□□□ 0.64
BRAT1-205ENST00000473879 PHLPP1O60346 1717 aa19.01■□□□□ 0.63
BRAT1-205ENST00000473879 ABCC11Q96J66 1382 aa19.01■□□□□ 0.63
BRAT1-205ENST00000473879 TMEM132EQ6IEE7 984 aa19■□□□□ 0.63
BRAT1-205ENST00000473879 DLC1Q96QB1 1528 aa19■□□□□ 0.63
BRAT1-205ENST00000473879 CFAP70Q5T0N1 1121 aa18.99■□□□□ 0.63
BRAT1-205ENST00000473879 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
BRAT1-205ENST00000473879 MST1RQ04912 1400 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms