RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
TRAPPC12-217ENST00000473348 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
TRAPPC12-217ENST00000473348 TIMELESSQ9UNS1 1208 aa18.1■□□□□ 0.49
TRAPPC12-217ENST00000473348 IQGAP1P46940 1657 aa18.09■□□□□ 0.49
TRAPPC12-217ENST00000473348 TMEM2Q9UHN6 1383 aa18.08■□□□□ 0.49
TRAPPC12-217ENST00000473348 RPGRIP1LQ68CZ1 1315 aa18.08■□□□□ 0.49
TRAPPC12-217ENST00000473348 KIAA1210Q9ULL0 1709 aa18.08■□□□□ 0.48
TRAPPC12-217ENST00000473348 LAMC1P11047 1609 aa18.08■□□□□ 0.48
TRAPPC12-217ENST00000473348 TRPM1Q7Z4N2 1603 aa18.08■□□□□ 0.48
TRAPPC12-217ENST00000473348 THEMISQ8N1K5 641 aaPredicted RBP18.07■□□□□ 0.48
TRAPPC12-217ENST00000473348 DCAF11Q8TEB1 546 aa18.07■□□□□ 0.48
TRAPPC12-217ENST00000473348 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
TRAPPC12-217ENST00000473348 SETD1AO15047 1707 aaKnown RBP18.06■□□□□ 0.48
TRAPPC12-217ENST00000473348 ZEB1P37275 1124 aaPredicted RBP18.05■□□□□ 0.48
TRAPPC12-217ENST00000473348 NRXN1Q9ULB1 1477 aa18.05■□□□□ 0.48
TRAPPC12-217ENST00000473348 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
TRAPPC12-217ENST00000473348 KDM2AQ9Y2K7 1162 aa18.04■□□□□ 0.48
TRAPPC12-217ENST00000473348 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
TRAPPC12-217ENST00000473348 STRCQ7RTU9 1775 aa18.04■□□□□ 0.48
TRAPPC12-217ENST00000473348 SETBP1Q9Y6X0 1596 aa18.03■□□□□ 0.48
TRAPPC12-217ENST00000473348 PIK3C2GO75747 1445 aa18.01■□□□□ 0.47
TRAPPC12-217ENST00000473348 NUTM2DQ5VT03 806 aaPredicted RBP18.01■□□□□ 0.47
TRAPPC12-217ENST00000473348 STAC3Q96MF2 364 aa18.01■□□□□ 0.47
TRAPPC12-217ENST00000473348 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
TRAPPC12-217ENST00000473348 ABCF1Q8NE71 845 aaKnown RBP eCLIP18■□□□□ 0.47
TRAPPC12-217ENST00000473348 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
TRAPPC12-217ENST00000473348 VGFO15240 615 aaPredicted RBP17.99■□□□□ 0.47
TRAPPC12-217ENST00000473348 HDGFP51858 240 aaKnown RBP17.99■□□□□ 0.47
TRAPPC12-217ENST00000473348 EID1Q9Y6B2 187 aa17.99■□□□□ 0.47
TRAPPC12-217ENST00000473348 ALKQ9UM73 1620 aa17.98■□□□□ 0.47
TRAPPC12-217ENST00000473348 RALGAPBQ86X10 1494 aa17.98■□□□□ 0.47
TRAPPC12-217ENST00000473348 DIP2AQ14689 1571 aa17.97■□□□□ 0.47
TRAPPC12-217ENST00000473348 PLEKHG1Q9ULL1 1385 aa17.97■□□□□ 0.47
TRAPPC12-217ENST00000473348 LTKP29376 864 aa17.97■□□□□ 0.47
TRAPPC12-217ENST00000473348 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
TRAPPC12-217ENST00000473348 HSPA2P54652 639 aa17.96■□□□□ 0.47
TRAPPC12-217ENST00000473348 NBPF8Q3BBV2 869 aa17.96■□□□□ 0.47
TRAPPC12-217ENST00000473348 MED14O60244 1454 aa17.95■□□□□ 0.46
TRAPPC12-217ENST00000473348 ANKLE2Q86XL3 938 aa17.95■□□□□ 0.46
TRAPPC12-217ENST00000473348 ASXL1Q8IXJ9 1541 aa17.94■□□□□ 0.46
TRAPPC12-217ENST00000473348 SENP3Q9H4L4 574 aaPredicted RBP17.93■□□□□ 0.46
TRAPPC12-217ENST00000473348 NPHP4O75161 1426 aaPredicted RBP17.92■□□□□ 0.46
TRAPPC12-217ENST00000473348 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
TRAPPC12-217ENST00000473348 KNDC1Q76NI1 1749 aa17.92■□□□□ 0.46
TRAPPC12-217ENST00000473348 ADGRB1O14514 1584 aa17.91■□□□□ 0.46
TRAPPC12-217ENST00000473348 CHD2O14647 1828 aaKnown RBP17.91■□□□□ 0.46
TRAPPC12-217ENST00000473348 AEBP2Q6ZN18 517 aaPredicted RBP17.91■□□□□ 0.46
TRAPPC12-217ENST00000473348 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
TRAPPC12-217ENST00000473348 ARHGEF28Q8N1W1 1705 aaKnown RBP17.9■□□□□ 0.46
TRAPPC12-217ENST00000473348 BCANQ96GW7 911 aa17.9■□□□□ 0.46
TRAPPC12-217ENST00000473348 CFAP70Q5T0N1 1121 aa17.89■□□□□ 0.45
TRAPPC12-217ENST00000473348 ROCK2O75116 1388 aaKnown RBP17.89■□□□□ 0.45
TRAPPC12-217ENST00000473348 XRN1Q8IZH2 1706 aaKnown RBP17.87■□□□□ 0.45
TRAPPC12-217ENST00000473348 C14orf93Q9H972 538 aaKnown RBP17.87■□□□□ 0.45
TRAPPC12-217ENST00000473348 GPRASP1Q5JY77 1395 aa17.86■□□□□ 0.45
TRAPPC12-217ENST00000473348 NBPF1Q3BBV0 1214 aa17.85■□□□□ 0.45
TRAPPC12-217ENST00000473348 SLC26A8Q96RN1 970 aa17.84■□□□□ 0.45
TRAPPC12-217ENST00000473348 STRCP1A6NGW2 1772 aa17.84■□□□□ 0.45
TRAPPC12-217ENST00000473348 QRICH2Q9H0J4 1663 aa17.83■□□□□ 0.45
TRAPPC12-217ENST00000473348 NWD1Q149M9 1564 aa17.83■□□□□ 0.45
TRAPPC12-217ENST00000473348 METP08581 1390 aa17.83■□□□□ 0.45
TRAPPC12-217ENST00000473348 CPS1P31327 1500 aa17.82■□□□□ 0.44
TRAPPC12-217ENST00000473348 YTHDC2Q9H6S0 1430 aaKnown RBP17.81■□□□□ 0.44
TRAPPC12-217ENST00000473348 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
TRAPPC12-217ENST00000473348 TBX22Q9Y458 520 aa17.81■□□□□ 0.44
TRAPPC12-217ENST00000473348 CARD11Q9BXL7 1154 aa17.8■□□□□ 0.44
TRAPPC12-217ENST00000473348 PIK3R4Q99570 1358 aa17.79■□□□□ 0.44
TRAPPC12-217ENST00000473348 DLC1Q96QB1 1528 aa17.79■□□□□ 0.44
TRAPPC12-217ENST00000473348 PTPRUQ92729 1446 aa17.79■□□□□ 0.44
TRAPPC12-217ENST00000473348 LRPPRCP42704 1394 aaKnown RBP17.78■□□□□ 0.44
TRAPPC12-217ENST00000473348 USP47Q96K76 1375 aa17.78■□□□□ 0.44
TRAPPC12-217ENST00000473348 TECPR2O15040 1411 aa17.77■□□□□ 0.44
TRAPPC12-217ENST00000473348 EIF3AQ14152 1382 aaKnown RBP17.75■□□□□ 0.43
TRAPPC12-217ENST00000473348 STK26Q9P289 416 aa17.74■□□□□ 0.43
TRAPPC12-217ENST00000473348 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
TRAPPC12-217ENST00000473348 ABCC11Q96J66 1382 aa17.74■□□□□ 0.43
TRAPPC12-217ENST00000473348 XIRP1Q702N8 1843 aaKnown RBP17.74■□□□□ 0.43
TRAPPC12-217ENST00000473348 NKTRP30414 1462 aaKnown RBP17.74■□□□□ 0.43
TRAPPC12-217ENST00000473348 PTCH1Q13635 1447 aa17.73■□□□□ 0.43
TRAPPC12-217ENST00000473348 NALCNQ8IZF0 1738 aa17.73■□□□□ 0.43
TRAPPC12-217ENST00000473348 TRAK1Q9UPV9 953 aa17.73■□□□□ 0.43
TRAPPC12-217ENST00000473348 EIF4G2P78344 907 aaKnown RBP eCLIP17.71■□□□□ 0.434e-10■■■■□ 23.3
TRAPPC12-217ENST00000473348 AMOTL2Q9Y2J4 779 aa17.71■□□□□ 0.43
TRAPPC12-217ENST00000473348 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.71■□□□□ 0.43
TRAPPC12-217ENST00000473348 FAM135BQ49AJ0 1406 aa17.7■□□□□ 0.42
TRAPPC12-217ENST00000473348 ROBO2Q9HCK4 1378 aa17.69■□□□□ 0.42
TRAPPC12-217ENST00000473348 HSPA5P11021 654 aaKnown RBP17.69■□□□□ 0.42
TRAPPC12-217ENST00000473348 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
TRAPPC12-217ENST00000473348 KCNA6P17658 529 aa17.68■□□□□ 0.42
TRAPPC12-217ENST00000473348 CENPJQ9HC77 1338 aaPredicted RBP17.68■□□□□ 0.42
TRAPPC12-217ENST00000473348 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
TRAPPC12-217ENST00000473348 ST20-MTHFSA0A0A6YYL1 179 aa17.66■□□□□ 0.42
TRAPPC12-217ENST00000473348 PRAM1Q96QH2 718 aa17.66■□□□□ 0.42
TRAPPC12-217ENST00000473348 HIRIP3Q9BW71 556 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC12-217ENST00000473348 POGKQ9P215 609 aa17.65■□□□□ 0.42
TRAPPC12-217ENST00000473348 ZNF335Q9H4Z2 1342 aaPredicted RBP17.65■□□□□ 0.42
TRAPPC12-217ENST00000473348 SBNO2Q9Y2G9 1366 aa17.65■□□□□ 0.42
TRAPPC12-217ENST00000473348 SIRT1Q96EB6 747 aa17.64■□□□□ 0.41
TRAPPC12-217ENST00000473348 TULP4Q9NRJ4 1543 aa17.63■□□□□ 0.41
TRAPPC12-217ENST00000473348 LTBP4Q8N2S1 1624 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms