RNA–Protein interactions for RNA: ENST00000473177.1

LRCH3-214, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 520 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-214ENST00000473177 GPR37O15354 613 aa7.77□□□□□ -1.17
LRCH3-214ENST00000473177 EN1Q05925 392 aaPredicted RBP7.77□□□□□ -1.17
LRCH3-214ENST00000473177 TYW1BQ6NUM6 668 aa7.77□□□□□ -1.17
LRCH3-214ENST00000473177 BARGINQ6ZT62 677 aa7.77□□□□□ -1.17
LRCH3-214ENST00000473177 ERICH3Q5RHP9 1530 aa7.77□□□□□ -1.17
LRCH3-214ENST00000473177 RUSC2Q8N2Y8 1516 aa7.77□□□□□ -1.17
LRCH3-214ENST00000473177 PLB1Q6P1J6 1458 aa7.76□□□□□ -1.17
LRCH3-214ENST00000473177 NUTM2FA1L443 756 aa7.76□□□□□ -1.17
LRCH3-214ENST00000473177 TEX14Q8IWB6 1497 aa7.75□□□□□ -1.17
LRCH3-214ENST00000473177 PSDA5PKW4 1024 aaPredicted RBP7.75□□□□□ -1.17
LRCH3-214ENST00000473177 VARS2Q5ST30 1063 aaKnown RBP7.75□□□□□ -1.17
LRCH3-214ENST00000473177 ZNF454Q8N9F8 522 aa7.75□□□□□ -1.17
LRCH3-214ENST00000473177 ASXL2Q76L83 1435 aa7.75□□□□□ -1.17
LRCH3-214ENST00000473177 MAP3K7O43318 606 aa7.74□□□□□ -1.17
LRCH3-214ENST00000473177 ILDR2Q71H61 639 aa7.74□□□□□ -1.17
LRCH3-214ENST00000473177 ZDHHC16Q969W1 377 aa7.74□□□□□ -1.17
LRCH3-214ENST00000473177 LHX6Q9UPM6 363 aa7.74□□□□□ -1.17
LRCH3-214ENST00000473177 COL17A1Q9UMD9 1497 aaPredicted RBP7.74□□□□□ -1.17
LRCH3-214ENST00000473177 GLI2P10070 1586 aa7.73□□□□□ -1.17
LRCH3-214ENST00000473177 PTPRGP23470 1445 aa7.73□□□□□ -1.17
LRCH3-214ENST00000473177 FCHSD2O94868 740 aa7.73□□□□□ -1.17
LRCH3-214ENST00000473177 PTGDRQ13258 359 aa7.73□□□□□ -1.17
LRCH3-214ENST00000473177 ABCC2Q92887 1545 aa7.73□□□□□ -1.17
LRCH3-214ENST00000473177 HIC1Q14526 733 aa7.72□□□□□ -1.17
LRCH3-214ENST00000473177 RBM33Q96EV2 1170 aaKnown RBP7.72□□□□□ -1.17
LRCH3-214ENST00000473177 PPRC1Q5VV67 1664 aaKnown RBP7.71□□□□□ -1.18
LRCH3-214ENST00000473177 GNPATO15228 680 aa7.71□□□□□ -1.18
LRCH3-214ENST00000473177 PPP4R3BQ5MIZ7 849 aa7.71□□□□□ -1.18
LRCH3-214ENST00000473177 SLC24A3Q9HC58 644 aa7.71□□□□□ -1.18
LRCH3-214ENST00000473177 NPDC1Q9NQX5 325 aaPredicted RBP7.71□□□□□ -1.18
LRCH3-214ENST00000473177 KIAA0586Q9BVV6 1533 aa7.7□□□□□ -1.18
LRCH3-214ENST00000473177 ZEB1P37275 1124 aaPredicted RBP7.7□□□□□ -1.18
LRCH3-214ENST00000473177 TSR1Q2NL82 804 aaKnown RBP7.7□□□□□ -1.18
LRCH3-214ENST00000473177 C6orf132Q5T0Z8 1188 aa7.7□□□□□ -1.18
LRCH3-214ENST00000473177 ZNF687Q8N1G0 1237 aa7.7□□□□□ -1.18
LRCH3-214ENST00000473177 ADAM33Q9BZ11 813 aa7.7□□□□□ -1.18
LRCH3-214ENST00000473177 CDHR5Q9HBB8 845 aa7.7□□□□□ -1.18
LRCH3-214ENST00000473177 KRI1Q8N9T8 703 aaKnown RBP7.69□□□□□ -1.18
LRCH3-214ENST00000473177 CERKQ8TCT0 537 aa7.69□□□□□ -1.18
LRCH3-214ENST00000473177 CARMIL2Q6F5E8 1435 aa7.69□□□□□ -1.18
LRCH3-214ENST00000473177 EPRSP07814 1512 aaKnown RBP7.68□□□□□ -1.18
LRCH3-214ENST00000473177 SUPT5HO00267 1087 aaKnown RBP7.68□□□□□ -1.18
LRCH3-214ENST00000473177 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
LRCH3-214ENST00000473177 RNF166Q96A37 237 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-214ENST00000473177 AK7Q96M32 723 aa7.68□□□□□ -1.18
LRCH3-214ENST00000473177 BCL2L12Q9HB09 334 aa7.68□□□□□ -1.18
LRCH3-214ENST00000473177 MINK1Q8N4C8 1332 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-214ENST00000473177 TNIKQ9UKE5 1360 aa7.68□□□□□ -1.18
LRCH3-214ENST00000473177 MAP3K4Q9Y6R4 1608 aa7.67□□□□□ -1.18
LRCH3-214ENST00000473177 FECHP22830 423 aa7.66□□□□□ -1.18
LRCH3-214ENST00000473177 PTPRMP28827 1452 aa7.66□□□□□ -1.18
LRCH3-214ENST00000473177 PCF11O94913 1555 aaKnown RBP7.66□□□□□ -1.18
LRCH3-214ENST00000473177 IRF6O14896 467 aa7.65□□□□□ -1.18
LRCH3-214ENST00000473177 MYT1Q01538 1121 aa7.65□□□□□ -1.18
LRCH3-214ENST00000473177 UACAQ9BZF9 1416 aa7.65□□□□□ -1.18
LRCH3-214ENST00000473177 MYT1LQ9UL68 1186 aa7.65□□□□□ -1.18
LRCH3-214ENST00000473177 BIVM-ERCC5R4GMW8 1640 aa7.65□□□□□ -1.18
LRCH3-214ENST00000473177 CUL7Q14999 1698 aa7.64□□□□□ -1.19
LRCH3-214ENST00000473177 KIF21BO75037 1637 aa7.64□□□□□ -1.19
LRCH3-214ENST00000473177 SPATA31D1Q6ZQQ2 1576 aa7.64□□□□□ -1.19
LRCH3-214ENST00000473177 UHRF1BP1LA0JNW5 1464 aa7.64□□□□□ -1.19
LRCH3-214ENST00000473177 PTPREP23469 700 aa7.64□□□□□ -1.19
LRCH3-214ENST00000473177 RBM27Q9P2N5 1060 aaKnown RBP7.64□□□□□ -1.19
LRCH3-214ENST00000473177 CCDC102AQ96A19 550 aa7.63□□□□□ -1.19
LRCH3-214ENST00000473177 ARID4BQ4LE39 1312 aaPredicted RBP7.62□□□□□ -1.19
LRCH3-214ENST00000473177 PPP1R3GB7ZBB8 358 aa7.62□□□□□ -1.19
LRCH3-214ENST00000473177 TRIM66O15016 1216 aa7.62□□□□□ -1.19
LRCH3-214ENST00000473177 TTC13Q8NBP0 860 aa7.62□□□□□ -1.19
LRCH3-214ENST00000473177 WDR7Q9Y4E6 1490 aa7.62□□□□□ -1.19
LRCH3-214ENST00000473177 CD109Q6YHK3 1445 aa7.61□□□□□ -1.19
LRCH3-214ENST00000473177 COL9A1P20849 921 aa7.61□□□□□ -1.19
LRCH3-214ENST00000473177 HSPA2P54652 639 aa7.61□□□□□ -1.19
LRCH3-214ENST00000473177 BRPF1P55201 1214 aaPredicted RBP7.61□□□□□ -1.19
LRCH3-214ENST00000473177 PRSS12P56730 875 aa7.61□□□□□ -1.19
LRCH3-214ENST00000473177 KDM5BQ9UGL1 1544 aa7.61□□□□□ -1.19
LRCH3-214ENST00000473177 PADI6Q6TGC4 694 aa7.6□□□□□ -1.19
LRCH3-214ENST00000473177 CDCA7LQ96GN5 454 aa7.6□□□□□ -1.19
LRCH3-214ENST00000473177 MAGI3Q5TCQ9 1506 aa7.6□□□□□ -1.19
LRCH3-214ENST00000473177 PBX2P40425 430 aa7.59□□□□□ -1.19
LRCH3-214ENST00000473177 AMHR2Q16671 573 aa7.59□□□□□ -1.19
LRCH3-214ENST00000473177 KCNH8Q96L42 1107 aa7.59□□□□□ -1.19
LRCH3-214ENST00000473177 ZCCHC11Q5TAX3 1644 aaKnown RBP7.59□□□□□ -1.19
LRCH3-214ENST00000473177 LSM11P83369 360 aaKnown RBP eCLIP7.58□□□□□ -1.2
LRCH3-214ENST00000473177 PDE4DQ08499 809 aa7.58□□□□□ -1.2
LRCH3-214ENST00000473177 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
LRCH3-214ENST00000473177 ANKRD13DQ6ZTN6 518 aa7.58□□□□□ -1.2
LRCH3-214ENST00000473177 KCNK17Q96T54 332 aa7.58□□□□□ -1.2
LRCH3-214ENST00000473177 ARHGAP33O14559 1287 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 OATP04181 439 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
LRCH3-214ENST00000473177 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 ADGRG1Q9Y653 693 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 IQGAP2Q13576 1575 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 ADAMTSL3P82987 1691 aa7.57□□□□□ -1.2
LRCH3-214ENST00000473177 KIF27Q86VH2 1401 aa7.56□□□□□ -1.2
LRCH3-214ENST00000473177 ONECUT3O60422 494 aaPredicted RBP7.56□□□□□ -1.2
LRCH3-214ENST00000473177 POTEEQ6S8J3 1075 aa7.56□□□□□ -1.2
LRCH3-214ENST00000473177 FAM198AQ9UFP1 575 aa7.56□□□□□ -1.2
LRCH3-214ENST00000473177 IGF1RP08069 1367 aa7.56□□□□□ -1.2
LRCH3-214ENST00000473177 MADDQ8WXG6 1647 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms