RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 DCAF11Q8TEB1 546 aa24.24■■□□□ 1.47
CCM2-205ENST00000472223 VGFO15240 615 aaPredicted RBP24.22■■□□□ 1.47
CCM2-205ENST00000472223 TMEM2Q9UHN6 1383 aa24.21■■□□□ 1.47
CCM2-205ENST00000472223 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
CCM2-205ENST00000472223 L3MBTL2Q969R5 705 aa24.2■■□□□ 1.46
CCM2-205ENST00000472223 KDM2AQ9Y2K7 1162 aa24.2■■□□□ 1.46
CCM2-205ENST00000472223 RIMS2Q9UQ26 1411 aa24.19■■□□□ 1.46
CCM2-205ENST00000472223 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
CCM2-205ENST00000472223 TXNDC2Q86VQ3 553 aa24.19■■□□□ 1.46
CCM2-205ENST00000472223 BCANQ96GW7 911 aa24.18■■□□□ 1.46
CCM2-205ENST00000472223 LMTK3Q96Q04 1460 aa24.16■■□□□ 1.46
CCM2-205ENST00000472223 SLIT1O75093 1534 aa24.15■■□□□ 1.46
CCM2-205ENST00000472223 NUTM2DQ5VT03 806 aaPredicted RBP24.15■■□□□ 1.46
CCM2-205ENST00000472223 PPLO60437 1756 aa24.14■■□□□ 1.46
CCM2-205ENST00000472223 HSPA2P54652 639 aa24.13■■□□□ 1.45
CCM2-205ENST00000472223 NEXMIFQ5QGS0 1516 aa24.13■■□□□ 1.45
CCM2-205ENST00000472223 ARHGAP23Q9P227 1491 aa24.13■■□□□ 1.45
CCM2-205ENST00000472223 SCAF11Q99590 1463 aaKnown RBP24.11■■□□□ 1.45
CCM2-205ENST00000472223 ZFYVE9O95405 1425 aa24.1■■□□□ 1.45
CCM2-205ENST00000472223 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
CCM2-205ENST00000472223 MYOM2P54296 1465 aa24.09■■□□□ 1.45
CCM2-205ENST00000472223 LTKP29376 864 aa24.08■■□□□ 1.45
CCM2-205ENST00000472223 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
CCM2-205ENST00000472223 ADGRF5Q8IZF2 1346 aa24.06■■□□□ 1.44
CCM2-205ENST00000472223 NCKAP5LQ9HCH0 1330 aa24.06■■□□□ 1.44
CCM2-205ENST00000472223 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
CCM2-205ENST00000472223 DMRT2Q9Y5R5 561 aa24.04■■□□□ 1.44
CCM2-205ENST00000472223 SENP3Q9H4L4 574 aaPredicted RBP24.02■■□□□ 1.44
CCM2-205ENST00000472223 NPHP4O75161 1426 aaPredicted RBP24.01■■□□□ 1.43
CCM2-205ENST00000472223 PRAG1Q86YV5 1406 aa24■■□□□ 1.43
CCM2-205ENST00000472223 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
CCM2-205ENST00000472223 MED14O60244 1454 aa23.98■■□□□ 1.43
CCM2-205ENST00000472223 NRXN1Q9ULB1 1477 aa23.98■■□□□ 1.43
CCM2-205ENST00000472223 IQGAP1P46940 1657 aa23.97■■□□□ 1.43
CCM2-205ENST00000472223 LAMC1P11047 1609 aa23.96■■□□□ 1.43
CCM2-205ENST00000472223 C14orf93Q9H972 538 aaKnown RBP23.96■■□□□ 1.43
CCM2-205ENST00000472223 SETBP1Q9Y6X0 1596 aa23.95■■□□□ 1.43
CCM2-205ENST00000472223 CFAP70Q5T0N1 1121 aa23.95■■□□□ 1.42
CCM2-205ENST00000472223 SLC26A8Q96RN1 970 aa23.95■■□□□ 1.42
CCM2-205ENST00000472223 TBX22Q9Y458 520 aa23.95■■□□□ 1.42
CCM2-205ENST00000472223 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
CCM2-205ENST00000472223 NBPF8Q3BBV2 869 aa23.93■■□□□ 1.42
CCM2-205ENST00000472223 DIP2AQ14689 1571 aa23.93■■□□□ 1.42
CCM2-205ENST00000472223 KIAA1210Q9ULL0 1709 aa23.93■■□□□ 1.42
CCM2-205ENST00000472223 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
CCM2-205ENST00000472223 ROCK2O75116 1388 aaKnown RBP23.91■■□□□ 1.42
CCM2-205ENST00000472223 TRPM1Q7Z4N2 1603 aa23.88■■□□□ 1.41
CCM2-205ENST00000472223 ADAMTS13Q76LX8 1427 aa23.88■■□□□ 1.41
CCM2-205ENST00000472223 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
CCM2-205ENST00000472223 PIK3R4Q99570 1358 aa23.87■■□□□ 1.41
CCM2-205ENST00000472223 NRXN3Q9Y4C0 1643 aa23.87■■□□□ 1.41
CCM2-205ENST00000472223 TMEM132EQ6IEE7 984 aa23.86■■□□□ 1.41
CCM2-205ENST00000472223 RALGAPBQ86X10 1494 aa23.86■■□□□ 1.41
CCM2-205ENST00000472223 NBPF1Q3BBV0 1214 aa23.85■■□□□ 1.41
CCM2-205ENST00000472223 STK26Q9P289 416 aa23.83■■□□□ 1.41
CCM2-205ENST00000472223 METP08581 1390 aa23.82■■□□□ 1.4
CCM2-205ENST00000472223 SETD1AO15047 1707 aaKnown RBP23.8■■□□□ 1.4
CCM2-205ENST00000472223 AMOTL2Q9Y2J4 779 aa23.8■■□□□ 1.4
CCM2-205ENST00000472223 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
CCM2-205ENST00000472223 KCNA6P17658 529 aa23.79■■□□□ 1.4
CCM2-205ENST00000472223 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
CCM2-205ENST00000472223 TRAK1Q9UPV9 953 aa23.78■■□□□ 1.4
CCM2-205ENST00000472223 LRPPRCP42704 1394 aaKnown RBP23.78■■□□□ 1.4
CCM2-205ENST00000472223 GPRASP1Q5JY77 1395 aa23.78■■□□□ 1.4
CCM2-205ENST00000472223 CHD2O14647 1828 aaKnown RBP23.76■■□□□ 1.39
CCM2-205ENST00000472223 ADGRB1O14514 1584 aa23.76■■□□□ 1.39
CCM2-205ENST00000472223 POGKQ9P215 609 aa23.75■■□□□ 1.39
CCM2-205ENST00000472223 ABCC11Q96J66 1382 aa23.75■■□□□ 1.39
CCM2-205ENST00000472223 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
CCM2-205ENST00000472223 SIRT1Q96EB6 747 aa23.72■■□□□ 1.39
CCM2-205ENST00000472223 ASXL1Q8IXJ9 1541 aa23.72■■□□□ 1.39
CCM2-205ENST00000472223 PTPRUQ92729 1446 aa23.7■■□□□ 1.38
CCM2-205ENST00000472223 PROSER2Q86WR7 435 aaPredicted RBP23.7■■□□□ 1.38
CCM2-205ENST00000472223 KNDC1Q76NI1 1749 aa23.7■■□□□ 1.38
CCM2-205ENST00000472223 USP47Q96K76 1375 aa23.69■■□□□ 1.38
CCM2-205ENST00000472223 SLC24A1O60721 1099 aa23.69■■□□□ 1.38
CCM2-205ENST00000472223 ZNF335Q9H4Z2 1342 aaPredicted RBP23.68■■□□□ 1.38
CCM2-205ENST00000472223 PRAM1Q96QH2 718 aa23.68■■□□□ 1.38
CCM2-205ENST00000472223 DLC1Q96QB1 1528 aa23.68■■□□□ 1.38
CCM2-205ENST00000472223 TECPR2O15040 1411 aa23.67■■□□□ 1.38
CCM2-205ENST00000472223 C14orf37Q86TY3 774 aa23.67■■□□□ 1.38
CCM2-205ENST00000472223 NKTRP30414 1462 aaKnown RBP23.67■■□□□ 1.38
CCM2-205ENST00000472223 XRN1Q8IZH2 1706 aaKnown RBP23.67■■□□□ 1.38
CCM2-205ENST00000472223 NWD1Q149M9 1564 aa23.66■■□□□ 1.38
CCM2-205ENST00000472223 CENPJQ9HC77 1338 aaPredicted RBP23.66■■□□□ 1.38
CCM2-205ENST00000472223 PTCH1Q13635 1447 aa23.66■■□□□ 1.38
CCM2-205ENST00000472223 FAM135BQ49AJ0 1406 aa23.66■■□□□ 1.38
CCM2-205ENST00000472223 CPS1P31327 1500 aa23.64■■□□□ 1.38
CCM2-205ENST00000472223 WAPLQ7Z5K2 1190 aa23.64■■□□□ 1.37
CCM2-205ENST00000472223 ARHGEF28Q8N1W1 1705 aaKnown RBP23.64■■□□□ 1.37
CCM2-205ENST00000472223 ST20-MTHFSA0A0A6YYL1 179 aa23.63■■□□□ 1.37
CCM2-205ENST00000472223 SAFB2Q14151 953 aaKnown RBP eCLIP23.63■■□□□ 1.375e-8■■■□□ 18
CCM2-205ENST00000472223 ROBO2Q9HCK4 1378 aa23.63■■□□□ 1.37
CCM2-205ENST00000472223 HSPA5P11021 654 aaKnown RBP23.62■■□□□ 1.37
CCM2-205ENST00000472223 STRCP1A6NGW2 1772 aa23.59■■□□□ 1.37
CCM2-205ENST00000472223 NCOA3Q9Y6Q9 1424 aa23.58■■□□□ 1.36
CCM2-205ENST00000472223 QRICH2Q9H0J4 1663 aa23.57■■□□□ 1.36
CCM2-205ENST00000472223 MINK1Q8N4C8 1332 aaPredicted RBP23.57■■□□□ 1.36
CCM2-205ENST00000472223 TMF1P82094 1093 aa23.56■■□□□ 1.36
CCM2-205ENST00000472223 TMEM94Q12767 1356 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms