RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 SCAF11Q99590 1463 aaKnown RBP17.98■□□□□ 0.47
PRKCB-205ENST00000472066 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
PRKCB-205ENST00000472066 SPATA31E1Q6ZUB1 1445 aa17.98■□□□□ 0.47
PRKCB-205ENST00000472066 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
PRKCB-205ENST00000472066 MED14O60244 1454 aa17.96■□□□□ 0.47
PRKCB-205ENST00000472066 NPHP4O75161 1426 aaPredicted RBP17.96■□□□□ 0.47
PRKCB-205ENST00000472066 PPP1R15AO75807 674 aaPredicted RBP17.95■□□□□ 0.46
PRKCB-205ENST00000472066 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
PRKCB-205ENST00000472066 NEURL4Q96JN8 1562 aa17.93■□□□□ 0.46
PRKCB-205ENST00000472066 KIF1BO60333 1816 aa17.93■□□□□ 0.46
PRKCB-205ENST00000472066 VGFO15240 615 aaPredicted RBP17.92■□□□□ 0.46
PRKCB-205ENST00000472066 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
PRKCB-205ENST00000472066 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
PRKCB-205ENST00000472066 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
PRKCB-205ENST00000472066 BCANQ96GW7 911 aa17.91■□□□□ 0.46
PRKCB-205ENST00000472066 SENP3Q9H4L4 574 aaPredicted RBP17.91■□□□□ 0.46
PRKCB-205ENST00000472066 NEXMIFQ5QGS0 1516 aa17.9■□□□□ 0.46
PRKCB-205ENST00000472066 SLC26A8Q96RN1 970 aa17.89■□□□□ 0.45
PRKCB-205ENST00000472066 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.45
PRKCB-205ENST00000472066 ADGRF5Q8IZF2 1346 aa17.87■□□□□ 0.45
PRKCB-205ENST00000472066 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
PRKCB-205ENST00000472066 DCAF11Q8TEB1 546 aa17.86■□□□□ 0.45
PRKCB-205ENST00000472066 TBX22Q9Y458 520 aa17.86■□□□□ 0.45
PRKCB-205ENST00000472066 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
PRKCB-205ENST00000472066 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
PRKCB-205ENST00000472066 KDM2AQ9Y2K7 1162 aa17.85■□□□□ 0.45
PRKCB-205ENST00000472066 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
PRKCB-205ENST00000472066 ADAMTS13Q76LX8 1427 aa17.83■□□□□ 0.45
PRKCB-205ENST00000472066 ZNF335Q9H4Z2 1342 aaPredicted RBP17.83■□□□□ 0.44
PRKCB-205ENST00000472066 L3MBTL2Q969R5 705 aa17.82■□□□□ 0.44
PRKCB-205ENST00000472066 PPLO60437 1756 aa17.81■□□□□ 0.44
PRKCB-205ENST00000472066 SETBP1Q9Y6X0 1596 aa17.8■□□□□ 0.44
PRKCB-205ENST00000472066 MYOM2P54296 1465 aa17.8■□□□□ 0.44
PRKCB-205ENST00000472066 NRXN1Q9ULB1 1477 aa17.78■□□□□ 0.44
PRKCB-205ENST00000472066 KCNA6P17658 529 aa17.78■□□□□ 0.44
PRKCB-205ENST00000472066 IFT172Q9UG01 1749 aa17.78■□□□□ 0.44
PRKCB-205ENST00000472066 C14orf93Q9H972 538 aaKnown RBP17.77■□□□□ 0.44
PRKCB-205ENST00000472066 PIK3C2GO75747 1445 aa17.77■□□□□ 0.44
PRKCB-205ENST00000472066 METP08581 1390 aa17.77■□□□□ 0.43
PRKCB-205ENST00000472066 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
PRKCB-205ENST00000472066 CFAP70Q5T0N1 1121 aa17.76■□□□□ 0.43
PRKCB-205ENST00000472066 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
PRKCB-205ENST00000472066 PIK3R4Q99570 1358 aa17.76■□□□□ 0.43
PRKCB-205ENST00000472066 NRXN3Q9Y4C0 1643 aa17.76■□□□□ 0.43
PRKCB-205ENST00000472066 ALKQ9UM73 1620 aa17.75■□□□□ 0.43
PRKCB-205ENST00000472066 AMOTL2Q9Y2J4 779 aa17.74■□□□□ 0.43
PRKCB-205ENST00000472066 LTBP4Q8N2S1 1624 aa17.73■□□□□ 0.43
PRKCB-205ENST00000472066 PTPRUQ92729 1446 aa17.72■□□□□ 0.43
PRKCB-205ENST00000472066 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
PRKCB-205ENST00000472066 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
PRKCB-205ENST00000472066 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
PRKCB-205ENST00000472066 PRAG1Q86YV5 1406 aa17.7■□□□□ 0.42
PRKCB-205ENST00000472066 CPS1P31327 1500 aa17.69■□□□□ 0.42
PRKCB-205ENST00000472066 PROSER2Q86WR7 435 aaPredicted RBP17.69■□□□□ 0.42
PRKCB-205ENST00000472066 NBPF8Q3BBV2 869 aa17.67■□□□□ 0.42
PRKCB-205ENST00000472066 STK26Q9P289 416 aa17.67■□□□□ 0.42
PRKCB-205ENST00000472066 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
PRKCB-205ENST00000472066 RBM33Q96EV2 1170 aaKnown RBP17.66■□□□□ 0.42
PRKCB-205ENST00000472066 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
PRKCB-205ENST00000472066 LRRC7Q96NW7 1537 aa17.66■□□□□ 0.42
PRKCB-205ENST00000472066 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
PRKCB-205ENST00000472066 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
PRKCB-205ENST00000472066 NKTRP30414 1462 aaKnown RBP17.65■□□□□ 0.42
PRKCB-205ENST00000472066 NBPF1Q3BBV0 1214 aa17.65■□□□□ 0.42
PRKCB-205ENST00000472066 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
PRKCB-205ENST00000472066 ASXL1Q8IXJ9 1541 aa17.64■□□□□ 0.41
PRKCB-205ENST00000472066 TMEM94Q12767 1356 aa17.64■□□□□ 0.41
PRKCB-205ENST00000472066 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
PRKCB-205ENST00000472066 YTHDC2Q9H6S0 1430 aaKnown RBP17.64■□□□□ 0.41
PRKCB-205ENST00000472066 LAMC1P11047 1609 aa17.63■□□□□ 0.41
PRKCB-205ENST00000472066 ROBO2Q9HCK4 1378 aa17.62■□□□□ 0.41
PRKCB-205ENST00000472066 ADGRB1O14514 1584 aa17.62■□□□□ 0.41
PRKCB-205ENST00000472066 SIRT1Q96EB6 747 aa17.61■□□□□ 0.41
PRKCB-205ENST00000472066 XRN1Q8IZH2 1706 aaKnown RBP17.61■□□□□ 0.41
PRKCB-205ENST00000472066 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
PRKCB-205ENST00000472066 TECPR2O15040 1411 aa17.6■□□□□ 0.41
PRKCB-205ENST00000472066 IQSEC2Q5JU85 1478 aa17.59■□□□□ 0.41
PRKCB-205ENST00000472066 PTCH1Q13635 1447 aa17.59■□□□□ 0.41
PRKCB-205ENST00000472066 NCOA3Q9Y6Q9 1424 aa17.59■□□□□ 0.41
PRKCB-205ENST00000472066 WAPLQ7Z5K2 1190 aa17.59■□□□□ 0.41
PRKCB-205ENST00000472066 ROCK2O75116 1388 aaKnown RBP17.57■□□□□ 0.4
PRKCB-205ENST00000472066 C14orf37Q86TY3 774 aa17.57■□□□□ 0.4
PRKCB-205ENST00000472066 KIAA1210Q9ULL0 1709 aa17.57■□□□□ 0.4
PRKCB-205ENST00000472066 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
PRKCB-205ENST00000472066 C19orf44Q9H6X5 657 aa17.56■□□□□ 0.4
PRKCB-205ENST00000472066 FAM135BQ49AJ0 1406 aa17.55■□□□□ 0.4
PRKCB-205ENST00000472066 TRPM1Q7Z4N2 1603 aa17.54■□□□□ 0.4
PRKCB-205ENST00000472066 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
PRKCB-205ENST00000472066 CARD11Q9BXL7 1154 aa17.54■□□□□ 0.4
PRKCB-205ENST00000472066 POGKQ9P215 609 aa17.54■□□□□ 0.4
PRKCB-205ENST00000472066 MSH6P52701 1360 aa17.53■□□□□ 0.4
PRKCB-205ENST00000472066 GPRASP1Q5JY77 1395 aa17.53■□□□□ 0.4
PRKCB-205ENST00000472066 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
PRKCB-205ENST00000472066 RALGAPBQ86X10 1494 aa17.53■□□□□ 0.4
PRKCB-205ENST00000472066 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
PRKCB-205ENST00000472066 SAFB2Q14151 953 aaKnown RBP eCLIP17.52■□□□□ 0.4
PRKCB-205ENST00000472066 TOM1O60784 492 aa17.51■□□□□ 0.39
PRKCB-205ENST00000472066 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
PRKCB-205ENST00000472066 ADGRL3Q9HAR2 1447 aa17.5■□□□□ 0.39
PRKCB-205ENST00000472066 XIRP1Q702N8 1843 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms