RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-208ENST00000470980 ARHGAP23Q9P227 1491 aa13.29□□□□□ -0.28
GREB1-208ENST00000470980 UBR1Q8IWV7 1749 aa13.28□□□□□ -0.28
GREB1-208ENST00000470980 SLIT1O75093 1534 aa13.28□□□□□ -0.28
GREB1-208ENST00000470980 TET3O43151 1660 aa13.28□□□□□ -0.28
GREB1-208ENST00000470980 TOM1O60784 492 aa13.27□□□□□ -0.29
GREB1-208ENST00000470980 CCDC144AA2RUR9 1427 aa13.27□□□□□ -0.29
GREB1-208ENST00000470980 CEP152O94986 1710 aa13.27□□□□□ -0.29
GREB1-208ENST00000470980 LMTK2Q8IWU2 1503 aa13.26□□□□□ -0.29
GREB1-208ENST00000470980 E9PCH4 1651 aa13.25□□□□□ -0.29
GREB1-208ENST00000470980 STRCP1A6NGW2 1772 aa13.25□□□□□ -0.29
GREB1-208ENST00000470980 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
GREB1-208ENST00000470980 SYNMO15061 1565 aa13.24□□□□□ -0.29
GREB1-208ENST00000470980 LRRC7Q96NW7 1537 aa13.24□□□□□ -0.29
GREB1-208ENST00000470980 SCAF11Q99590 1463 aaKnown RBP13.24□□□□□ -0.29
GREB1-208ENST00000470980 EFCAB6Q5THR3 1501 aa13.23□□□□□ -0.29
GREB1-208ENST00000470980 HSPA1LP34931 641 aa13.22□□□□□ -0.29
GREB1-208ENST00000470980 LTKP29376 864 aa13.21□□□□□ -0.29
GREB1-208ENST00000470980 TRPM2O94759 1503 aa13.2□□□□□ -0.3
GREB1-208ENST00000470980 SPHKAPQ2M3C7 1700 aa13.2□□□□□ -0.3
GREB1-208ENST00000470980 NOS1P29475 1434 aa13.2□□□□□ -0.3
GREB1-208ENST00000470980 NBPF8Q3BBV2 869 aa13.19□□□□□ -0.3
GREB1-208ENST00000470980 RGL3Q3MIN7 710 aa13.19□□□□□ -0.3
GREB1-208ENST00000470980 ZNF326Q5BKZ1 582 aaKnown RBP13.19□□□□□ -0.3
GREB1-208ENST00000470980 PIK3C2BO00750 1634 aa13.19□□□□□ -0.3
GREB1-208ENST00000470980 TMEM2Q9UHN6 1383 aa13.19□□□□□ -0.3
GREB1-208ENST00000470980 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
GREB1-208ENST00000470980 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
GREB1-208ENST00000470980 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
GREB1-208ENST00000470980 MED1Q15648 1581 aaPredicted RBP13.18□□□□□ -0.3
GREB1-208ENST00000470980 PIP4K2BP78356 416 aa13.17□□□□□ -0.3
GREB1-208ENST00000470980 TXNDC2Q86VQ3 553 aa13.17□□□□□ -0.3
GREB1-208ENST00000470980 CFAP65Q6ZU64 1925 aaKnown RBP13.17□□□□□ -0.3
GREB1-208ENST00000470980 CLTCL1P53675 1640 aa13.16□□□□□ -0.3
GREB1-208ENST00000470980 IDI1Q13907 227 aa13.15□□□□□ -0.3
GREB1-208ENST00000470980 EID1Q9Y6B2 187 aa13.15□□□□□ -0.3
GREB1-208ENST00000470980 XIRP1Q702N8 1843 aaKnown RBP13.15□□□□□ -0.3
GREB1-208ENST00000470980 HIRIP3Q9BW71 556 aaPredicted RBP13.14□□□□□ -0.31
GREB1-208ENST00000470980 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
GREB1-208ENST00000470980 SLC52A1Q9NWF4 448 aa13.13□□□□□ -0.31
GREB1-208ENST00000470980 SCAF1Q9H7N4 1312 aaKnown RBP13.13□□□□□ -0.31
GREB1-208ENST00000470980 EIF4G2P78344 907 aaKnown RBP eCLIP13.12□□□□□ -0.31
GREB1-208ENST00000470980 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
GREB1-208ENST00000470980 HSPA5P11021 654 aaKnown RBP13.11□□□□□ -0.31
GREB1-208ENST00000470980 FAM135BQ49AJ0 1406 aa13.11□□□□□ -0.31
GREB1-208ENST00000470980 NWD1Q149M9 1564 aa13.11□□□□□ -0.31
GREB1-208ENST00000470980 RALGAPBQ86X10 1494 aa13.1□□□□□ -0.31
GREB1-208ENST00000470980 KCNA6P17658 529 aa13.1□□□□□ -0.31
GREB1-208ENST00000470980 ZFYVE9O95405 1425 aa13.09□□□□□ -0.31
GREB1-208ENST00000470980 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
GREB1-208ENST00000470980 PRAG1Q86YV5 1406 aa13.09□□□□□ -0.31
GREB1-208ENST00000470980 NKTRP30414 1462 aaKnown RBP13.08□□□□□ -0.32
GREB1-208ENST00000470980 KIF1BO60333 1816 aa13.08□□□□□ -0.32
GREB1-208ENST00000470980 STAC3Q96MF2 364 aa13.07□□□□□ -0.32
GREB1-208ENST00000470980 STAG3Q9UJ98 1225 aa13.07□□□□□ -0.32
GREB1-208ENST00000470980 TMEM94Q12767 1356 aa13.07□□□□□ -0.32
GREB1-208ENST00000470980 MYT1Q01538 1121 aa13.06□□□□□ -0.32
GREB1-208ENST00000470980 CARD11Q9BXL7 1154 aa13.06□□□□□ -0.32
GREB1-208ENST00000470980 TMEM131LA2VDJ0 1609 aa13.06□□□□□ -0.32
GREB1-208ENST00000470980 ROCK2O75116 1388 aaKnown RBP13.06□□□□□ -0.32
GREB1-208ENST00000470980 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
GREB1-208ENST00000470980 USP47Q96K76 1375 aa13.05□□□□□ -0.32
GREB1-208ENST00000470980 TRPM1Q7Z4N2 1603 aa13.04□□□□□ -0.32
GREB1-208ENST00000470980 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
GREB1-208ENST00000470980 NCOA3Q9Y6Q9 1424 aa13.03□□□□□ -0.32
GREB1-208ENST00000470980 CHD2O14647 1828 aaKnown RBP13.02□□□□□ -0.32
GREB1-208ENST00000470980 DDX10Q13206 875 aaKnown RBP13.02□□□□□ -0.33
GREB1-208ENST00000470980 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
GREB1-208ENST00000470980 RIMS2Q9UQ26 1411 aa13.02□□□□□ -0.33
GREB1-208ENST00000470980 HDGFP51858 240 aaKnown RBP13.01□□□□□ -0.33
GREB1-208ENST00000470980 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
GREB1-208ENST00000470980 TBX22Q9Y458 520 aa13.01□□□□□ -0.33
GREB1-208ENST00000470980 RPGRIP1LQ68CZ1 1315 aa13.01□□□□□ -0.33
GREB1-208ENST00000470980 MYOM2P54296 1465 aa13.01□□□□□ -0.33
GREB1-208ENST00000470980 MYO5BQ9ULV0 1848 aa13□□□□□ -0.33
GREB1-208ENST00000470980 ROBO1Q9Y6N7 1651 aa13□□□□□ -0.33
GREB1-208ENST00000470980 ADAMTS13Q76LX8 1427 aa13□□□□□ -0.33
GREB1-208ENST00000470980 PROSER2Q86WR7 435 aaPredicted RBP13□□□□□ -0.33
GREB1-208ENST00000470980 GPRASP1Q5JY77 1395 aa12.99□□□□□ -0.33
GREB1-208ENST00000470980 PIK3R4Q99570 1358 aa12.99□□□□□ -0.33
GREB1-208ENST00000470980 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.99□□□□□ -0.33
GREB1-208ENST00000470980 IFT172Q9UG01 1749 aa12.99□□□□□ -0.33
GREB1-208ENST00000470980 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
GREB1-208ENST00000470980 WASHC2AQ641Q2 1341 aa12.98□□□□□ -0.33
GREB1-208ENST00000470980 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
GREB1-208ENST00000470980 LAMC1P11047 1609 aa12.98□□□□□ -0.33
GREB1-208ENST00000470980 MSH6P52701 1360 aa12.97□□□□□ -0.33
GREB1-208ENST00000470980 MIER1Q8N108 512 aa12.97□□□□□ -0.33
GREB1-208ENST00000470980 CCDC7Q96M83 1385 aa12.96□□□□□ -0.33
GREB1-208ENST00000470980 ST20-MTHFSA0A0A6YYL1 179 aa12.96□□□□□ -0.33
GREB1-208ENST00000470980 SLAIN2Q9P270 581 aa12.96□□□□□ -0.33
GREB1-208ENST00000470980 PPLO60437 1756 aa12.96□□□□□ -0.34
GREB1-208ENST00000470980 NRXN1Q9ULB1 1477 aa12.96□□□□□ -0.34
GREB1-208ENST00000470980 C11orf95C9JLR9 678 aaPredicted RBP12.95□□□□□ -0.34
GREB1-208ENST00000470980 VGFO15240 615 aaPredicted RBP12.95□□□□□ -0.34
GREB1-208ENST00000470980 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
GREB1-208ENST00000470980 NEXMIFQ5QGS0 1516 aa12.94□□□□□ -0.34
GREB1-208ENST00000470980 KIAA1210Q9ULL0 1709 aa12.94□□□□□ -0.34
GREB1-208ENST00000470980 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
GREB1-208ENST00000470980 RBM33Q96EV2 1170 aaKnown RBP12.94□□□□□ -0.34
GREB1-208ENST00000470980 KIF7Q2M1P5 1343 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms