RNA–Protein interactions for RNA: ENST00000470723.5

SND1-209, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-209ENST00000470723 LTKP29376 864 aa18.4■□□□□ 0.54
SND1-209ENST00000470723 SIN3AQ96ST3 1273 aa18.4■□□□□ 0.54
SND1-209ENST00000470723 TXNDC2Q86VQ3 553 aa18.39■□□□□ 0.53
SND1-209ENST00000470723 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
SND1-209ENST00000470723 STAC3Q96MF2 364 aa18.39■□□□□ 0.53
SND1-209ENST00000470723 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
SND1-209ENST00000470723 MYO5BQ9ULV0 1848 aa18.38■□□□□ 0.53
SND1-209ENST00000470723 EID1Q9Y6B2 187 aa18.37■□□□□ 0.53
SND1-209ENST00000470723 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
SND1-209ENST00000470723 RIMS2Q9UQ26 1411 aa18.36■□□□□ 0.53
SND1-209ENST00000470723 MED14O60244 1454 aa18.35■□□□□ 0.53
SND1-209ENST00000470723 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
SND1-209ENST00000470723 VGFO15240 615 aaPredicted RBP18.35■□□□□ 0.53
SND1-209ENST00000470723 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
SND1-209ENST00000470723 STRCQ7RTU9 1775 aa18.35■□□□□ 0.53
SND1-209ENST00000470723 CCER1Q8TC90 406 aaPredicted RBP18.34■□□□□ 0.53
SND1-209ENST00000470723 DMRT2Q9Y5R5 561 aa18.34■□□□□ 0.53
SND1-209ENST00000470723 SCAF11Q99590 1463 aaKnown RBP18.32■□□□□ 0.52
SND1-209ENST00000470723 NEUROD1Q13562 356 aa18.31■□□□□ 0.52
SND1-209ENST00000470723 TIMELESSQ9UNS1 1208 aa18.31■□□□□ 0.52
SND1-209ENST00000470723 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
SND1-209ENST00000470723 PLEKHG1Q9ULL1 1385 aa18.3■□□□□ 0.52
SND1-209ENST00000470723 L3MBTL2Q969R5 705 aa18.29■□□□□ 0.52
SND1-209ENST00000470723 PPLO60437 1756 aa18.27■□□□□ 0.52
SND1-209ENST00000470723 NPHP4O75161 1426 aaPredicted RBP18.27■□□□□ 0.52
SND1-209ENST00000470723 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
SND1-209ENST00000470723 DCAF11Q8TEB1 546 aa18.27■□□□□ 0.52
SND1-209ENST00000470723 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
SND1-209ENST00000470723 ADGRF5Q8IZF2 1346 aa18.26■□□□□ 0.51
SND1-209ENST00000470723 POLR1AO95602 1720 aaPredicted RBP18.26■□□□□ 0.51
SND1-209ENST00000470723 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
SND1-209ENST00000470723 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
SND1-209ENST00000470723 NRXN1Q9ULB1 1477 aa18.25■□□□□ 0.51
SND1-209ENST00000470723 MYOM2P54296 1465 aa18.24■□□□□ 0.51
SND1-209ENST00000470723 C14orf93Q9H972 538 aaKnown RBP18.23■□□□□ 0.51
SND1-209ENST00000470723 KDM2AQ9Y2K7 1162 aa18.22■□□□□ 0.51
SND1-209ENST00000470723 ADAMTS13Q76LX8 1427 aa18.22■□□□□ 0.51
SND1-209ENST00000470723 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
SND1-209ENST00000470723 IQGAP1P46940 1657 aa18.2■□□□□ 0.5
SND1-209ENST00000470723 TONSLQ96HA7 1378 aa18.19■□□□□ 0.5
SND1-209ENST00000470723 PIK3C2GO75747 1445 aa18.19■□□□□ 0.5
SND1-209ENST00000470723 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
SND1-209ENST00000470723 PIK3R4Q99570 1358 aa18.18■□□□□ 0.5
SND1-209ENST00000470723 NRXN3Q9Y4C0 1643 aa18.17■□□□□ 0.5
SND1-209ENST00000470723 BCANQ96GW7 911 aa18.17■□□□□ 0.5
SND1-209ENST00000470723 KCNA6P17658 529 aa18.15■□□□□ 0.5
SND1-209ENST00000470723 CFAP70Q5T0N1 1121 aa18.15■□□□□ 0.5
SND1-209ENST00000470723 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
SND1-209ENST00000470723 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
SND1-209ENST00000470723 DIP2AQ14689 1571 aa18.14■□□□□ 0.49
SND1-209ENST00000470723 NBPF8Q3BBV2 869 aa18.13■□□□□ 0.49
SND1-209ENST00000470723 METP08581 1390 aa18.13■□□□□ 0.49
SND1-209ENST00000470723 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
SND1-209ENST00000470723 CHD2O14647 1828 aaKnown RBP18.1■□□□□ 0.49
SND1-209ENST00000470723 SIRT1Q96EB6 747 aa18.1■□□□□ 0.49
SND1-209ENST00000470723 SENP3Q9H4L4 574 aaPredicted RBP18.1■□□□□ 0.49
SND1-209ENST00000470723 AMOTL2Q9Y2J4 779 aa18.09■□□□□ 0.49
SND1-209ENST00000470723 KIAA1210Q9ULL0 1709 aa18.09■□□□□ 0.49
SND1-209ENST00000470723 PTPRUQ92729 1446 aa18.08■□□□□ 0.49
SND1-209ENST00000470723 ABCC11Q96J66 1382 aa18.08■□□□□ 0.49
SND1-209ENST00000470723 ZNF335Q9H4Z2 1342 aaPredicted RBP18.08■□□□□ 0.49
SND1-209ENST00000470723 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
SND1-209ENST00000470723 NBPF1Q3BBV0 1214 aa18.07■□□□□ 0.48
SND1-209ENST00000470723 LRPPRCP42704 1394 aaKnown RBP18.06■□□□□ 0.48
SND1-209ENST00000470723 LAMC1P11047 1609 aa18.06■□□□□ 0.48
SND1-209ENST00000470723 ADGRB1O14514 1584 aa18.05■□□□□ 0.48
SND1-209ENST00000470723 LTBP4Q8N2S1 1624 aa18.05■□□□□ 0.48
SND1-209ENST00000470723 STRCP1A6NGW2 1772 aa18.04■□□□□ 0.48
SND1-209ENST00000470723 GPRASP1Q5JY77 1395 aa18.04■□□□□ 0.48
SND1-209ENST00000470723 TECPR2O15040 1411 aa18.03■□□□□ 0.48
SND1-209ENST00000470723 YTHDC2Q9H6S0 1430 aaKnown RBP18.03■□□□□ 0.48
SND1-209ENST00000470723 NWD1Q149M9 1564 aa18.03■□□□□ 0.48
SND1-209ENST00000470723 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
SND1-209ENST00000470723 NCOA3Q9Y6Q9 1424 aa18.01■□□□□ 0.47
SND1-209ENST00000470723 CPS1P31327 1500 aa18.01■□□□□ 0.47
SND1-209ENST00000470723 TRPM1Q7Z4N2 1603 aa18.01■□□□□ 0.47
SND1-209ENST00000470723 PROSER2Q86WR7 435 aaPredicted RBP18■□□□□ 0.47
SND1-209ENST00000470723 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
SND1-209ENST00000470723 NKTRP30414 1462 aaKnown RBP18■□□□□ 0.47
SND1-209ENST00000470723 STK26Q9P289 416 aa17.99■□□□□ 0.47
SND1-209ENST00000470723 RALGAPBQ86X10 1494 aa17.99■□□□□ 0.47
SND1-209ENST00000470723 PTCH1Q13635 1447 aa17.98■□□□□ 0.47
SND1-209ENST00000470723 FAM135BQ49AJ0 1406 aa17.98■□□□□ 0.47
SND1-209ENST00000470723 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
SND1-209ENST00000470723 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
SND1-209ENST00000470723 ROCK2O75116 1388 aaKnown RBP17.97■□□□□ 0.47
SND1-209ENST00000470723 DLC1Q96QB1 1528 aa17.97■□□□□ 0.47
SND1-209ENST00000470723 TRAK1Q9UPV9 953 aa17.96■□□□□ 0.47
SND1-209ENST00000470723 CARD11Q9BXL7 1154 aa17.95■□□□□ 0.46
SND1-209ENST00000470723 KNDC1Q76NI1 1749 aa17.95■□□□□ 0.46
SND1-209ENST00000470723 TMEM94Q12767 1356 aa17.94■□□□□ 0.46
SND1-209ENST00000470723 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
SND1-209ENST00000470723 WAPLQ7Z5K2 1190 aa17.94■□□□□ 0.46
SND1-209ENST00000470723 C19orf44Q9H6X5 657 aa17.93■□□□□ 0.46
SND1-209ENST00000470723 IQSEC2Q5JU85 1478 aa17.93■□□□□ 0.46
SND1-209ENST00000470723 PRAM1Q96QH2 718 aa17.92■□□□□ 0.46
SND1-209ENST00000470723 UBAP1LF5GYI3 381 aa17.91■□□□□ 0.46
SND1-209ENST00000470723 XIRP1Q702N8 1843 aaKnown RBP17.91■□□□□ 0.46
SND1-209ENST00000470723 RBM33Q96EV2 1170 aaKnown RBP17.9■□□□□ 0.46
SND1-209ENST00000470723 PLEKHH1Q9ULM0 1364 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms