RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 RIMS2Q9UQ26 1411 aa21.14■□□□□ 0.98
TOP3B-215ENST00000470338 HDGFP51858 240 aaKnown RBP21.14■□□□□ 0.97
TOP3B-215ENST00000470338 CLTCL1P53675 1640 aa21.14■□□□□ 0.97
TOP3B-215ENST00000470338 KIF1BO60333 1816 aa21.12■□□□□ 0.97
TOP3B-215ENST00000470338 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.11■□□□□ 0.97
TOP3B-215ENST00000470338 MPHOSPH9Q99550 1183 aa21.1■□□□□ 0.97
TOP3B-215ENST00000470338 PLEKHG1Q9ULL1 1385 aa21.1■□□□□ 0.97
TOP3B-215ENST00000470338 RAB3GAP2Q9H2M9 1393 aa21.08■□□□□ 0.96
TOP3B-215ENST00000470338 PPP1R15AO75807 674 aaPredicted RBP21.07■□□□□ 0.96
TOP3B-215ENST00000470338 SLC26A8Q96RN1 970 aa21.07■□□□□ 0.96
TOP3B-215ENST00000470338 FOXD1Q16676 465 aa21.05■□□□□ 0.96
TOP3B-215ENST00000470338 LRRC7Q96NW7 1537 aa21.04■□□□□ 0.96
TOP3B-215ENST00000470338 NUTM2DQ5VT03 806 aaPredicted RBP21.03■□□□□ 0.96
TOP3B-215ENST00000470338 BCANQ96GW7 911 aa21.03■□□□□ 0.96
TOP3B-215ENST00000470338 CHD2O14647 1828 aaKnown RBP21.02■□□□□ 0.96
TOP3B-215ENST00000470338 KCNA6P17658 529 aa21.02■□□□□ 0.96
TOP3B-215ENST00000470338 HRCP23327 699 aa21.02■□□□□ 0.96
TOP3B-215ENST00000470338 ZNF326Q5BKZ1 582 aaKnown RBP21.02■□□□□ 0.96
TOP3B-215ENST00000470338 TBX22Q9Y458 520 aa21.02■□□□□ 0.96
TOP3B-215ENST00000470338 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
TOP3B-215ENST00000470338 NEXMIFQ5QGS0 1516 aa21■□□□□ 0.95
TOP3B-215ENST00000470338 UBAP1LF5GYI3 381 aa21■□□□□ 0.95
TOP3B-215ENST00000470338 ADAMTS13Q76LX8 1427 aa21■□□□□ 0.95
TOP3B-215ENST00000470338 DIP2AQ14689 1571 aa20.99■□□□□ 0.95
TOP3B-215ENST00000470338 NWD1Q149M9 1564 aa20.99■□□□□ 0.95
TOP3B-215ENST00000470338 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
TOP3B-215ENST00000470338 NRXN3Q9Y4C0 1643 aa20.97■□□□□ 0.95
TOP3B-215ENST00000470338 SETBP1Q9Y6X0 1596 aa20.96■□□□□ 0.95
TOP3B-215ENST00000470338 RPGRIP1LQ68CZ1 1315 aa20.96■□□□□ 0.95
TOP3B-215ENST00000470338 CCDC144AA2RUR9 1427 aa20.95■□□□□ 0.95
TOP3B-215ENST00000470338 PPLO60437 1756 aa20.95■□□□□ 0.94
TOP3B-215ENST00000470338 NKTRP30414 1462 aaKnown RBP20.94■□□□□ 0.94
TOP3B-215ENST00000470338 TOM1O60784 492 aa20.94■□□□□ 0.94
TOP3B-215ENST00000470338 PIK3R4Q99570 1358 aa20.94■□□□□ 0.94
TOP3B-215ENST00000470338 ALKQ9UM73 1620 aa20.93■□□□□ 0.94
TOP3B-215ENST00000470338 SPATA31E1Q6ZUB1 1445 aa20.92■□□□□ 0.94
TOP3B-215ENST00000470338 VGFO15240 615 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-215ENST00000470338 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
TOP3B-215ENST00000470338 TMEM94Q12767 1356 aa20.9■□□□□ 0.94
TOP3B-215ENST00000470338 IFT172Q9UG01 1749 aa20.88■□□□□ 0.93
TOP3B-215ENST00000470338 PTPRUQ92729 1446 aa20.87■□□□□ 0.93
TOP3B-215ENST00000470338 ANKRD30BQ9BXX2 1392 aa20.86■□□□□ 0.93
TOP3B-215ENST00000470338 SETD1AO15047 1707 aaKnown RBP20.86■□□□□ 0.93
TOP3B-215ENST00000470338 PIP4K2BP78356 416 aa20.85■□□□□ 0.93
TOP3B-215ENST00000470338 RGL3Q3MIN7 710 aa20.85■□□□□ 0.93
TOP3B-215ENST00000470338 RBM33Q96EV2 1170 aaKnown RBP20.85■□□□□ 0.93
TOP3B-215ENST00000470338 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
TOP3B-215ENST00000470338 METP08581 1390 aa20.85■□□□□ 0.93
TOP3B-215ENST00000470338 XRN1Q8IZH2 1706 aaKnown RBP20.84■□□□□ 0.93
TOP3B-215ENST00000470338 NCOA3Q9Y6Q9 1424 aa20.84■□□□□ 0.93
TOP3B-215ENST00000470338 SCAF1Q9H7N4 1312 aaKnown RBP20.81■□□□□ 0.92
TOP3B-215ENST00000470338 ADGRF5Q8IZF2 1346 aa20.79■□□□□ 0.92
TOP3B-215ENST00000470338 MSH6P52701 1360 aa20.79■□□□□ 0.92
TOP3B-215ENST00000470338 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.76■□□□□ 0.91
TOP3B-215ENST00000470338 HSPA1LP34931 641 aa20.75■□□□□ 0.91
TOP3B-215ENST00000470338 PIK3C2GO75747 1445 aa20.74■□□□□ 0.91
TOP3B-215ENST00000470338 FAM135BQ49AJ0 1406 aa20.74■□□□□ 0.91
TOP3B-215ENST00000470338 C19orf44Q9H6X5 657 aa20.74■□□□□ 0.91
TOP3B-215ENST00000470338 PRAG1Q86YV5 1406 aa20.73■□□□□ 0.91
TOP3B-215ENST00000470338 MYOM2P54296 1465 aa20.73■□□□□ 0.91
TOP3B-215ENST00000470338 NRXN1Q9ULB1 1477 aa20.73■□□□□ 0.91
TOP3B-215ENST00000470338 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
TOP3B-215ENST00000470338 SLAIN2Q9P270 581 aa20.71■□□□□ 0.91
TOP3B-215ENST00000470338 ROBO1Q9Y6N7 1651 aa20.7■□□□□ 0.91
TOP3B-215ENST00000470338 PTCH1Q13635 1447 aa20.7■□□□□ 0.9
TOP3B-215ENST00000470338 TRIM26Q12899 539 aaPredicted RBP20.7■□□□□ 0.9
TOP3B-215ENST00000470338 CADPS2Q86UW7 1296 aa20.69■□□□□ 0.9
TOP3B-215ENST00000470338 C14orf93Q9H972 538 aaKnown RBP20.68■□□□□ 0.9
TOP3B-215ENST00000470338 DCCP43146 1447 aa20.68■□□□□ 0.9
TOP3B-215ENST00000470338 ATF3P18847 181 aa20.67■□□□□ 0.9
TOP3B-215ENST00000470338 ROBO2Q9HCK4 1378 aa20.67■□□□□ 0.9
TOP3B-215ENST00000470338 ASXL1Q8IXJ9 1541 aa20.67■□□□□ 0.9
TOP3B-215ENST00000470338 LAMC1P11047 1609 aa20.67■□□□□ 0.9
TOP3B-215ENST00000470338 NALCNQ8IZF0 1738 aa20.67■□□□□ 0.9
TOP3B-215ENST00000470338 STAC3Q96MF2 364 aa20.66■□□□□ 0.9
TOP3B-215ENST00000470338 ADGRL3Q9HAR2 1447 aa20.66■□□□□ 0.9
TOP3B-215ENST00000470338 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.9
TOP3B-215ENST00000470338 TECPR2O15040 1411 aa20.64■□□□□ 0.89
TOP3B-215ENST00000470338 LRPPRCP42704 1394 aaKnown RBP20.64■□□□□ 0.89
TOP3B-215ENST00000470338 DHX57Q6P158 1386 aaKnown RBP20.64■□□□□ 0.89
TOP3B-215ENST00000470338 TMEM132EQ6IEE7 984 aa20.64■□□□□ 0.89
TOP3B-215ENST00000470338 DCAF11Q8TEB1 546 aa20.64■□□□□ 0.89
TOP3B-215ENST00000470338 ABCC11Q96J66 1382 aa20.63■□□□□ 0.89
TOP3B-215ENST00000470338 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
TOP3B-215ENST00000470338 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
TOP3B-215ENST00000470338 YTHDC2Q9H6S0 1430 aaKnown RBP20.61■□□□□ 0.89
TOP3B-215ENST00000470338 STK26Q9P289 416 aa20.6■□□□□ 0.89
TOP3B-215ENST00000470338 MST1RQ04912 1400 aa20.59■□□□□ 0.89
TOP3B-215ENST00000470338 PHLPP1O60346 1717 aa20.58■□□□□ 0.89
TOP3B-215ENST00000470338 SIRT1Q96EB6 747 aa20.58■□□□□ 0.89
TOP3B-215ENST00000470338 ADGRB1O14514 1584 aa20.56■□□□□ 0.88
TOP3B-215ENST00000470338 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
TOP3B-215ENST00000470338 BRINP3Q76B58 766 aa20.55■□□□□ 0.88
TOP3B-215ENST00000470338 AHDC1Q5TGY3 1603 aaPredicted RBP20.54■□□□□ 0.88
TOP3B-215ENST00000470338 PLEKHH1Q9ULM0 1364 aa20.53■□□□□ 0.88
TOP3B-215ENST00000470338 COL16A1Q07092 1604 aaPredicted RBP20.53■□□□□ 0.88
TOP3B-215ENST00000470338 CDC42BPGQ6DT37 1551 aa20.52■□□□□ 0.88
TOP3B-215ENST00000470338 C1orf167Q5SNV9 1468 aa20.52■□□□□ 0.88
TOP3B-215ENST00000470338 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
TOP3B-215ENST00000470338 SIN3AQ96ST3 1273 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms