RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
SMC4-212ENST00000470240 PTPRGP23470 1445 aa11.1□□□□□ -0.63
SMC4-212ENST00000470240 FAM163AQ96GL9 167 aaPredicted RBP11.1□□□□□ -0.63
SMC4-212ENST00000470240 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
SMC4-212ENST00000470240 ARHGEF5Q12774 1597 aa11.1□□□□□ -0.63
SMC4-212ENST00000470240 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
SMC4-212ENST00000470240 KIAA1107Q9UPP5 1409 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 CHD1O14646 1710 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 ATP10BO94823 1461 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 SNPHO15079 494 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 TSPY4P0CV99 314 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 TSPY10P0CW01 314 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 NKX1-1Q15270 411 aaPredicted RBP11.09□□□□□ -0.63
SMC4-212ENST00000470240 RSPH4AQ5TD94 716 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 C9orf84Q5VXU9 1444 aa11.09□□□□□ -0.63
SMC4-212ENST00000470240 ABCC10Q5T3U5 1492 aa11.08□□□□□ -0.64
SMC4-212ENST00000470240 HSPA5P11021 654 aaKnown RBP11.08□□□□□ -0.64
SMC4-212ENST00000470240 HIRIP3Q9BW71 556 aaPredicted RBP11.08□□□□□ -0.64
SMC4-212ENST00000470240 ANKRD50Q9ULJ7 1429 aa11.08□□□□□ -0.64
SMC4-212ENST00000470240 PZPP20742 1482 aa11.07□□□□□ -0.64
SMC4-212ENST00000470240 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
SMC4-212ENST00000470240 POLR1AO95602 1720 aaPredicted RBP11.07□□□□□ -0.64
SMC4-212ENST00000470240 PREX2Q70Z35 1606 aa11.07□□□□□ -0.64
SMC4-212ENST00000470240 L3MBTL2Q969R5 705 aa11.07□□□□□ -0.64
SMC4-212ENST00000470240 PPP1R37O75864 691 aa11.06□□□□□ -0.64
SMC4-212ENST00000470240 CNTLNQ9NXG0 1405 aa11.06□□□□□ -0.64
SMC4-212ENST00000470240 SHROOM2Q13796 1616 aa11.06□□□□□ -0.64
SMC4-212ENST00000470240 KDM5DQ9BY66 1539 aa11.05□□□□□ -0.64
SMC4-212ENST00000470240 CCDC141Q6ZP82 1450 aa11.05□□□□□ -0.64
SMC4-212ENST00000470240 PLEKHH2Q8IVE3 1493 aa11.05□□□□□ -0.64
SMC4-212ENST00000470240 SUPT16HQ9Y5B9 1047 aaKnown RBP11.04□□□□□ -0.64
SMC4-212ENST00000470240 ARHGEF12Q9NZN5 1544 aa11.03□□□□□ -0.64
SMC4-212ENST00000470240 KIF15Q9NS87 1388 aa11.03□□□□□ -0.64
SMC4-212ENST00000470240 MYO5CQ9NQX4 1742 aa11.02□□□□□ -0.65
SMC4-212ENST00000470240 CCDC7Q96M83 1385 aa11.02□□□□□ -0.65
SMC4-212ENST00000470240 ARHGAP5Q13017 1502 aa11.01□□□□□ -0.65
SMC4-212ENST00000470240 ABCC2Q92887 1545 aa11.01□□□□□ -0.65
SMC4-212ENST00000470240 WASHC2AQ641Q2 1341 aa11.01□□□□□ -0.65
SMC4-212ENST00000470240 NUP155O75694 1391 aa11.01□□□□□ -0.65
SMC4-212ENST00000470240 MAST1Q9Y2H9 1570 aa11□□□□□ -0.65
SMC4-212ENST00000470240 TMEM92Q6UXU6 159 aa11□□□□□ -0.65
SMC4-212ENST00000470240 CDC42BPBQ9Y5S2 1711 aa11□□□□□ -0.65
SMC4-212ENST00000470240 MBD5Q9P267 1494 aa11□□□□□ -0.65
SMC4-212ENST00000470240 SAMD9LQ8IVG5 1584 aa10.99□□□□□ -0.65
SMC4-212ENST00000470240 BBXQ8WY36 941 aaPredicted RBP10.99□□□□□ -0.65
SMC4-212ENST00000470240 KCNH8Q96L42 1107 aa10.99□□□□□ -0.65
SMC4-212ENST00000470240 ARID4BQ4LE39 1312 aaPredicted RBP10.99□□□□□ -0.65
SMC4-212ENST00000470240 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
SMC4-212ENST00000470240 TMC2Q8TDI7 906 aa10.98□□□□□ -0.65
SMC4-212ENST00000470240 ST18O60284 1047 aa10.97□□□□□ -0.65
SMC4-212ENST00000470240 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.97□□□□□ -0.65
SMC4-212ENST00000470240 ROCK2O75116 1388 aaKnown RBP10.97□□□□□ -0.65
SMC4-212ENST00000470240 RALGAPBQ86X10 1494 aa10.97□□□□□ -0.65
SMC4-212ENST00000470240 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
SMC4-212ENST00000470240 SYCP2Q9BX26 1530 aa10.96□□□□□ -0.65
SMC4-212ENST00000470240 UHRF1BP1Q6BDS2 1440 aa10.96□□□□□ -0.65
SMC4-212ENST00000470240 DOK7Q18PE1 504 aa10.96□□□□□ -0.65
SMC4-212ENST00000470240 UNC13BO14795 1591 aa10.95□□□□□ -0.66
SMC4-212ENST00000470240 USP47Q96K76 1375 aa10.95□□□□□ -0.66
SMC4-212ENST00000470240 NBPF8Q3BBV2 869 aa10.95□□□□□ -0.66
SMC4-212ENST00000470240 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
SMC4-212ENST00000470240 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.94□□□□□ -0.668e-10■■■■□ 19.5
SMC4-212ENST00000470240 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 SPATA31E1Q6ZUB1 1445 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 C2orf72A6NCS6 295 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 POTEMA6NI47 508 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 HNRNPMP52272 730 aaKnown RBP eCLIP10.94□□□□□ -0.66
SMC4-212ENST00000470240 HNRNPUQ00839 825 aaKnown RBP eCLIP10.94□□□□□ -0.662e-22■■■■■ 68.1
SMC4-212ENST00000470240 MYT1Q01538 1121 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 ZNF326Q5BKZ1 582 aaKnown RBP10.94□□□□□ -0.66
SMC4-212ENST00000470240 LCE2DQ5TA82 110 aaPredicted RBP10.94□□□□□ -0.66
SMC4-212ENST00000470240 KDM5CP41229 1560 aa10.94□□□□□ -0.66
SMC4-212ENST00000470240 RIMBP2O15034 1052 aa10.93□□□□□ -0.66
SMC4-212ENST00000470240 POTEGQ6S5H5 508 aa10.93□□□□□ -0.66
SMC4-212ENST00000470240 DUOX2Q9NRD8 1548 aa10.93□□□□□ -0.66
SMC4-212ENST00000470240 CCDC144AA2RUR9 1427 aa10.92□□□□□ -0.66
SMC4-212ENST00000470240 ZCCHC11Q5TAX3 1644 aaKnown RBP10.92□□□□□ -0.66
SMC4-212ENST00000470240 KIF7Q2M1P5 1343 aa10.92□□□□□ -0.66
SMC4-212ENST00000470240 CLASP1Q7Z460 1538 aa10.92□□□□□ -0.66
SMC4-212ENST00000470240 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
SMC4-212ENST00000470240 IQGAP3Q86VI3 1631 aa10.91□□□□□ -0.66
SMC4-212ENST00000470240 EIF2AK4Q9P2K8 1649 aaKnown RBP10.91□□□□□ -0.66
SMC4-212ENST00000470240 PRKRIP1Q9H875 184 aaPredicted RBP10.91□□□□□ -0.66
SMC4-212ENST00000470240 MRS2Q9HD23 443 aa10.91□□□□□ -0.66
SMC4-212ENST00000470240 HOXB3P14651 431 aaPredicted RBP10.9□□□□□ -0.66
SMC4-212ENST00000470240 EFCAB2Q5VUJ9 269 aa10.9□□□□□ -0.66
SMC4-212ENST00000470240 CARD11Q9BXL7 1154 aa10.9□□□□□ -0.66
SMC4-212ENST00000470240 ARAP3Q8WWN8 1544 aa10.89□□□□□ -0.67
SMC4-212ENST00000470240 KIF3CO14782 793 aa10.89□□□□□ -0.67
SMC4-212ENST00000470240 PLCH2O75038 1416 aa10.89□□□□□ -0.67
SMC4-212ENST00000470240 KTN1Q86UP2 1357 aaKnown RBP10.89□□□□□ -0.67
SMC4-212ENST00000470240 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
SMC4-212ENST00000470240 ERICH6BQ5W0A0 696 aa10.88□□□□□ -0.67
SMC4-212ENST00000470240 SPRYD3Q8NCJ5 442 aa10.88□□□□□ -0.67
SMC4-212ENST00000470240 POLR3GLQ9BT43 218 aa10.87□□□□□ -0.67
SMC4-212ENST00000470240 ABCC1P33527 1531 aa10.87□□□□□ -0.67
SMC4-212ENST00000470240 LAMC1P11047 1609 aa10.87□□□□□ -0.67
SMC4-212ENST00000470240 DCAF11Q8TEB1 546 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms