RNA–Protein interactions for RNA: ENST00000468621.5

SND1-207, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-207ENST00000468621 UBAP1LF5GYI3 381 aa8□□□□□ -1.13
SND1-207ENST00000468621 PKD2Q13563 968 aa8□□□□□ -1.13
SND1-207ENST00000468621 CLTCL1P53675 1640 aa8□□□□□ -1.13
SND1-207ENST00000468621 THEMISQ8N1K5 641 aaPredicted RBP7.99□□□□□ -1.13
SND1-207ENST00000468621 SCAF11Q99590 1463 aaKnown RBP7.99□□□□□ -1.13
SND1-207ENST00000468621 CHD2O14647 1828 aaKnown RBP7.99□□□□□ -1.13
SND1-207ENST00000468621 IDI1Q13907 227 aa7.98□□□□□ -1.13
SND1-207ENST00000468621 SENP3Q9H4L4 574 aaPredicted RBP7.98□□□□□ -1.13
SND1-207ENST00000468621 IQSEC2Q5JU85 1478 aa7.98□□□□□ -1.13
SND1-207ENST00000468621 DHX57Q6P158 1386 aaKnown RBP7.97□□□□□ -1.13
SND1-207ENST00000468621 NPHP4O75161 1426 aaPredicted RBP7.97□□□□□ -1.13
SND1-207ENST00000468621 ANKLE2Q86XL3 938 aa7.97□□□□□ -1.13
SND1-207ENST00000468621 TRPM2O94759 1503 aa7.97□□□□□ -1.13
SND1-207ENST00000468621 ZNF335Q9H4Z2 1342 aaPredicted RBP7.97□□□□□ -1.13
SND1-207ENST00000468621 TMEM2Q9UHN6 1383 aa7.97□□□□□ -1.13
SND1-207ENST00000468621 LTKP29376 864 aa7.96□□□□□ -1.14
SND1-207ENST00000468621 SLC52A1Q9NWF4 448 aa7.96□□□□□ -1.14
SND1-207ENST00000468621 PPLO60437 1756 aa7.96□□□□□ -1.14
SND1-207ENST00000468621 ZFYVE9O95405 1425 aa7.95□□□□□ -1.14
SND1-207ENST00000468621 IFT172Q9UG01 1749 aa7.95□□□□□ -1.14
SND1-207ENST00000468621 PHF23Q9BUL5 403 aaPredicted RBP7.95□□□□□ -1.14
SND1-207ENST00000468621 MED1Q15648 1581 aaPredicted RBP7.94□□□□□ -1.14
SND1-207ENST00000468621 NRXN3Q9Y4C0 1643 aa7.94□□□□□ -1.14
SND1-207ENST00000468621 CPS1P31327 1500 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 SETD1AO15047 1707 aaKnown RBP7.93□□□□□ -1.14
SND1-207ENST00000468621 PIP4K2BP78356 416 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 TXNDC2Q86VQ3 553 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 STAG3Q9UJ98 1225 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 NEXMIFQ5QGS0 1516 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 NWD1Q149M9 1564 aa7.93□□□□□ -1.14
SND1-207ENST00000468621 SETD5Q9C0A6 1442 aa7.92□□□□□ -1.14
SND1-207ENST00000468621 RIMS2Q9UQ26 1411 aa7.92□□□□□ -1.14
SND1-207ENST00000468621 ALKQ9UM73 1620 aa7.92□□□□□ -1.14
SND1-207ENST00000468621 TRIM52Q96A61 297 aa7.91□□□□□ -1.14
SND1-207ENST00000468621 EID1Q9Y6B2 187 aa7.91□□□□□ -1.14
SND1-207ENST00000468621 DIP2AQ14689 1571 aa7.91□□□□□ -1.14
SND1-207ENST00000468621 LRRC7Q96NW7 1537 aa7.9□□□□□ -1.14
SND1-207ENST00000468621 RAB3GAP2Q9H2M9 1393 aa7.9□□□□□ -1.14
SND1-207ENST00000468621 PLEKHG1Q9ULL1 1385 aa7.9□□□□□ -1.14
SND1-207ENST00000468621 HSPA1LP34931 641 aa7.9□□□□□ -1.14
SND1-207ENST00000468621 SLC4A1APQ9BWU0 796 aaKnown RBP7.9□□□□□ -1.14
SND1-207ENST00000468621 SETBP1Q9Y6X0 1596 aa7.89□□□□□ -1.15
SND1-207ENST00000468621 CHGAP10645 457 aaKnown RBP7.89□□□□□ -1.15
SND1-207ENST00000468621 XRN1Q8IZH2 1706 aaKnown RBP7.89□□□□□ -1.15
SND1-207ENST00000468621 ADAMTS13Q76LX8 1427 aa7.88□□□□□ -1.15
SND1-207ENST00000468621 FOXD1Q16676 465 aa7.88□□□□□ -1.15
SND1-207ENST00000468621 NUTM2DQ5VT03 806 aaPredicted RBP7.88□□□□□ -1.15
SND1-207ENST00000468621 TOM1O60784 492 aa7.87□□□□□ -1.15
SND1-207ENST00000468621 SLC26A8Q96RN1 970 aa7.87□□□□□ -1.15
SND1-207ENST00000468621 MPHOSPH9Q99550 1183 aa7.87□□□□□ -1.15
SND1-207ENST00000468621 NKTRP30414 1462 aaKnown RBP7.87□□□□□ -1.15
SND1-207ENST00000468621 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.86□□□□□ -1.15
SND1-207ENST00000468621 SPATA31E1Q6ZUB1 1445 aa7.86□□□□□ -1.15
SND1-207ENST00000468621 PPP1R15AO75807 674 aaPredicted RBP7.85□□□□□ -1.15
SND1-207ENST00000468621 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.85□□□□□ -1.15
SND1-207ENST00000468621 CCDC144AA2RUR9 1427 aa7.85□□□□□ -1.15
SND1-207ENST00000468621 NALCNQ8IZF0 1738 aa7.84□□□□□ -1.15
SND1-207ENST00000468621 KCNA6P17658 529 aa7.84□□□□□ -1.15
SND1-207ENST00000468621 HDGFP51858 240 aaKnown RBP7.84□□□□□ -1.15
SND1-207ENST00000468621 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
SND1-207ENST00000468621 TBX22Q9Y458 520 aa7.84□□□□□ -1.15
SND1-207ENST00000468621 SUPT16HQ9Y5B9 1047 aaKnown RBP7.84□□□□□ -1.15
SND1-207ENST00000468621 PTPRUQ92729 1446 aa7.84□□□□□ -1.15
SND1-207ENST00000468621 ROBO1Q9Y6N7 1651 aa7.83□□□□□ -1.16
SND1-207ENST00000468621 KNDC1Q76NI1 1749 aa7.83□□□□□ -1.16
SND1-207ENST00000468621 TMEM94Q12767 1356 aa7.83□□□□□ -1.16
SND1-207ENST00000468621 PIK3R4Q99570 1358 aa7.83□□□□□ -1.16
SND1-207ENST00000468621 BCANQ96GW7 911 aa7.82□□□□□ -1.16
SND1-207ENST00000468621 METP08581 1390 aa7.82□□□□□ -1.16
SND1-207ENST00000468621 ANKRD30BQ9BXX2 1392 aa7.82□□□□□ -1.16
SND1-207ENST00000468621 LAMC1P11047 1609 aa7.81□□□□□ -1.16
SND1-207ENST00000468621 TIMELESSQ9UNS1 1208 aa7.81□□□□□ -1.16
SND1-207ENST00000468621 RGPD8O14715 1765 aaPredicted RBP7.81□□□□□ -1.16
SND1-207ENST00000468621 RPGRIP1LQ68CZ1 1315 aa7.8□□□□□ -1.16
SND1-207ENST00000468621 ASXL1Q8IXJ9 1541 aa7.8□□□□□ -1.16
SND1-207ENST00000468621 PROSER2Q86WR7 435 aaPredicted RBP7.8□□□□□ -1.16
SND1-207ENST00000468621 RBM33Q96EV2 1170 aaKnown RBP7.8□□□□□ -1.16
SND1-207ENST00000468621 NRXN1Q9ULB1 1477 aa7.8□□□□□ -1.16
SND1-207ENST00000468621 PIK3C2GO75747 1445 aa7.79□□□□□ -1.16
SND1-207ENST00000468621 PHLPP1O60346 1717 aa7.79□□□□□ -1.16
SND1-207ENST00000468621 VGFO15240 615 aaPredicted RBP7.79□□□□□ -1.16
SND1-207ENST00000468621 MYOM2P54296 1465 aa7.79□□□□□ -1.16
SND1-207ENST00000468621 ADGRF5Q8IZF2 1346 aa7.78□□□□□ -1.16
SND1-207ENST00000468621 PRAG1Q86YV5 1406 aa7.78□□□□□ -1.16
SND1-207ENST00000468621 NCOA3Q9Y6Q9 1424 aa7.78□□□□□ -1.16
SND1-207ENST00000468621 RGL3Q3MIN7 710 aa7.78□□□□□ -1.16
SND1-207ENST00000468621 AMOTL2Q9Y2J4 779 aa7.78□□□□□ -1.16
SND1-207ENST00000468621 MSH6P52701 1360 aa7.77□□□□□ -1.17
SND1-207ENST00000468621 SRCAPQ6ZRS2 3230 aa7.77□□□□□ -1.17
SND1-207ENST00000468621 KIAA1210Q9ULL0 1709 aa7.77□□□□□ -1.17
SND1-207ENST00000468621 NHSL1Q5SYE7 1610 aa7.77□□□□□ -1.17
SND1-207ENST00000468621 PTCH1Q13635 1447 aa7.77□□□□□ -1.17
SND1-207ENST00000468621 ARHGEF28Q8N1W1 1705 aaKnown RBP7.76□□□□□ -1.17
SND1-207ENST00000468621 SIN3AQ96ST3 1273 aa7.76□□□□□ -1.17
SND1-207ENST00000468621 FAM135BQ49AJ0 1406 aa7.76□□□□□ -1.17
SND1-207ENST00000468621 COL16A1Q07092 1604 aaPredicted RBP7.75□□□□□ -1.17
SND1-207ENST00000468621 ROBO2Q9HCK4 1378 aa7.75□□□□□ -1.17
SND1-207ENST00000468621 DDX10Q13206 875 aaKnown RBP7.75□□□□□ -1.17
SND1-207ENST00000468621 TECPR2O15040 1411 aa7.75□□□□□ -1.17
SND1-207ENST00000468621 DCCP43146 1447 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms